Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq2007 302 4e-77 seq82932 123 2e-23 >seq2007 Length=108395 Score = 302 bits (334), Expect = 4e-77 Identities = 491/703 (70%), Gaps = 8/703 (1%) Strand=Plus/Minus Query 126081 TGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCA 126140 ||||| || |||| ||| ||||| || || ||||| || |||||||| || || | ||| Sbjct 94833 TGATTTGAGTAAAGATGCGCATCGCCTAAAGTATGGATAAATTCACCAACTTCTAATCCC 94774 Query 126141 CATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCT 126200 ||| | ||||| |||||||||| ||||||||| || ||||||||||| || |||||| Sbjct 94773 GTTTCATGTGCAATCAGATGTGTCAATAAAGCATAGCTAGCAATATTGAACGGGACACCT 94714 Query 126201 AAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAA 126260 ||||| | ||||||||||||||||| | || ||| ||| |||| || | ||| || Sbjct 94713 AAAAACACGTCAGCACTTCTTTGATACAGCTGGCAACTTAGTTTATTGTCATTTACATAG 94654 Query 126261 AATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCG--ATTTCAGTAGGATTCC 126318 ||||||||||| ||||||||||| ||||| ||||| | | | | || ||||||| Sbjct 94653 AATTGAAACATCGTGTGGCAAGGAGGTAAAGCCAT--ACTTGGCACATCTTCTGGATTCC 94596 Query 126319 ATGCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTGTTGTATAACTGATT 126378 ||||||| || || | |||| || | || | || || || || ||| || Sbjct 94595 ATGCTGAGACGATCAGTCGTCTTGAATCAGGTGTCTGCTTGATAGCTTCGATCACTTCTT 94536 Query 126379 TTAATTGATCGTAATG--ATTTCCATTTTTATCTTCCCAATCTCTCCATTGTTTACCATA 126436 | | ||||||| ||| | | || | ||| |||||||| | |||||| | ||||| Sbjct 94535 TGATTTGATCG--ATGAAACTACCTTCTTTGGTTTCCCAATGACGCCATTGATAGCCATA 94478 Query 126437 AACATTCCCTAAGTTGCCATATTTTTTAGCAAATGCATCATCGTTTAGAATACGTTCTTT 126496 || || || | | |||| ||||| |||||| | ||||| | || ||| Sbjct 94477 AATATGACCAAGATCTCCATGTTTTTCTGCAAATTCTTCATCTGCCACTATCTTTTCACA 94418 Query 126497 AAATTTTTTCATTTCTTCTTTATACTGCTCGTTAAATTCAGGGTCTTGCTGGGAACGATG 126556 ||||| || ||||||||| ||| | || ||||| || || | |||||| Sbjct 94417 GAATTTCTTGCTTTCTTCTTGATAGACTTTATTGAATTCTGGATCAGTCAAACTACGATG 94358 Query 126557 TCCAAAATCTGTCATGTCTGGTCCATGATAATCATCAGACTGAACATAATTTTCAAATGC 126616 ||||||||||||||| || || || || ||||| ||| | | ||| ||||||||| Sbjct 94357 TCCAAAATCTGTCATATCCGGCCCTTGGTAATCCTCACTTTTGATATACCGTTCAAATGC 94298 Query 126617 CCATTCATTCCATATATTGTTATTATATTTAAGTAGGTATTGAATGTTTGTATCTCCTTT 126676 |||||||| ||| |||| |||||||| || | || || | || || || |||||||| Sbjct 94297 CCATTCATCCCAAATATGGTTATTATTTTGTAAAAGATAACGGATATTCGTGTCTCCTTT 94238 Query 126677 AATAAACCATAATAATTCAGTTGCTACTAATTTAAAAGAAACCTTTTTGGTTGTAAGTAA 126736 | ||||||||||||||| || | || ||||| || ||| || || | ||| Sbjct 94237 TAAAAACCATAATAATTCGCTTTTGATCAAACCAAAAGGTACACGTTTTGTCGTCAATAA 94178 Query 126737 AGGAAACCCTTTGGTTAAATCGAAACGCAATTGATGCCCAAAT 126779 ||||| ||||| | || || |||| ||||| || ||| Sbjct 94177 CGGAAAGCCTTTTTGCAGGTCAAATCGCATTTGATAACCGAAT 94135 >seq82932 Length=3722 Score = 123 bits (136), Expect = 2e-23 Identities = 277/401 (69%), Gaps = 25/401 (6%) Strand=Plus/Plus Query 71374 ATGTATTTTTCGACAATATCTATTACAATATGA-TTAGAG-CTATTAAGCTGATTATTGA 71431 ||||| ||||||||||| || ||||| ||| | ||||| ||||| | | || |||| Sbjct 2553 ATGTAATTTTCGACAATTTCGATTACTCTATTAATTAGAATCTATT--GGTTCTT-TTGA 2609 Query 71432 --TGTAAAAAGTTTCAGACTTTAGCGAGGAATGAAAACTTTCTATCGGGGCGTTATCAGC 71489 |||| || |||||||| ||||||||||| ||||| ||||||||| |||||||| | Sbjct 2610 AATGTAGAACGTTTCAGAATTTAGCGAGGAGTGAAACGATTCTATCGGAGCGTTATCTGA 2669 Query 71490 AGGTGTTCCCTTTCGGGACATACTTCTGATAATGCCTTTTTCTTCGCATAATTG-ATAAT 71548 || ||||| || || ||||||||| ||||| | |||| || || | | ||||| Sbjct 2670 AGTGGTTCCTTTACGTGACATACTTTGGATAACGTTTTTTGTTTAACAAGTTCGTATAAT 2729 Query 71549 AAGCATAAGATGTATAAACGCTG--CCTTGATCACTATGTAATATACACCCCTCGGGTAT 71606 | | | | |||| | | || |||||||||||||| || ||| | | | | Sbjct 2730 A--CCTTCAAAGTAT--AGGTTGATCCTTGATCACTATGCAAAATA-----ATTGTTTCT 2780 Query 71607 ATCGATTTGATTTAATGTATCATTAACTAAACTTTGG--TCTTGTTTATCATCTATTTTA 71664 | | || ||||||||||| |||| || || || | | ||| | || | Sbjct 2781 -TTTAAATGGTTTAATGTATCTACTGCTAA--TTGGGTATCCGGGTGTTCAGACAATTGA 2837 Query 71665 TACGCCACAATTTCTCCGTTATAAATATCCATTATCGAAGATAAATA-CACATAGAATGA 71723 || || | |||||| | ||| || | ||||| || | ||| | ||| |||| || | Sbjct 2838 TAAGCAATAATTTCACTATTAAAAGTGTCCATAATGGTAGAAAGATATAACATGGATTTG 2897 Query 71724 CCAAATGGTAAATAAGTAATATCGGTTGTTAATACTTCCAT 71764 ||||| || || ||||||||||| || |||||| |||||| Sbjct 2898 CCAAAGGGCAAGTAAGTAATATCTGTGGTTAATTTTTCCAT 2938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407801214817388