Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq20 163 2e-35
seq32113 102 6e-17
seq1641 86.0 4e-12
seq48995 84.2 2e-11
>seq20
Length=148542
Score = 163 bits (180), Expect = 2e-35
Identities = 592/924 (64%), Gaps = 23/924 (2%)
Strand=Plus/Plus
Query 91527 CGTTGCCTTTGGCGCCACACTTTATCATGTCGTCAAAGCAGCCGGTCAATTTGAACACTT 91586
|||||||||||||||| |||| ||||||||| ||| || | || || || | ||
Sbjct 86232 CGTTGCCTTTGGCGCCGCACTCGATCATGTCGGTGAAGTGTCCCGCCAGTTGAAATATTT 86291
Query 91587 CATCGTTGTTACAAATCATTTCCTCTTCGTTGATTATTTT-GCAAAACTCTTTAAACAAA 91645
| || | ||| | ||||||||| ||| ||| || || | |||| ||| |||||
Sbjct 86292 CTGTGTCGCCACACACCATTTCCTCGTCGGCGATCATGTTCGTCAAACG-TTTGAACAAC 86350
Query 91646 AGCGTAGCCATGTTACTGCTAAACACGAGTGTGACATCTGTAAAAAATTTGTCTAAACAT 91705
| || ||| ||| |||||||| | ||| || || || | || ||||
Sbjct 86351 AAATAGGCGGCGTTGGAGCTGAACACGAGGGCGACGTCGCGCAACAACGTTTCCAAACGC 86410
Query 91706 TCGGAAAAGTATTTTTGCAAACGCCTTTGTCTTTGCCACAATGTGTACACTTTGGGGTAT 91765
| | ||| | |||| || || | ||||||| ||| ||| ||| ||
Sbjct 86411 TGCGCAAACT------GCAAGTGCGCGTGCATGCGCCACAACATGTTCACGACGGGCAAT 86464
Query 91766 TGTGACAAAAACGA-TTCGAT-GCGATCCCTATTTTTGAATAAATACAACACTTGTTGAG 91823
|||| |||| || ||||| ||| || | |||||||| | ||| | | |||||| |
Sbjct 86465 TGTG-CAAACGCGCGTTCGAGCGCG-TCAATGTTTTTGAACAGATAGTAAATTTGTTGGG 86522
Query 91824 ACACAAAAGATAATTTATTTTTGTCGAAACACAAAAACGAATATTTGGGATCGCAATACA 91883
|||| || | | ||| |||||||| || | || | | || |||| ||||
Sbjct 86523 ACACGAAGCTGAGTCGATTCTTGTCGAAGCATATGAAATTAAACCGCGGGTCGCCGTACA 86582
Query 91884 ACAAAGACTCCAATTCTATCAACGAATTCGGGTACGGCAAAAAAGTGAACACCTCTTTGT 91943
| ||| |||||| || || | || || | ||||| ||| |||| | | |||||
Sbjct 86583 ATAAACACTCCAGGTCGATGAGACTGTTGGGTTGCGGCAGAAAGGTGATGATTTTTTTGT 86642
Query 91944 CTCCATCGCAATCGCGATTGGCGCCAACGAAAGTA--CCCAGACCGATTTTAACGTTCCA 92001
| |||||||||||| |||||||| || || || |||| || | ||| ||||||||
Sbjct 86643 CGCCATCGCAATCGGTGTTGGCGCC--CGGAAATATGCCCAAGCCCACTTTGACGTTCCA 86700
Query 92002 ATTGG-GTT----TCGGCGAAGGAATCACGGTGGAAAACTGGGTGGACAATTGTGATATG 92056
|| || ||| ||| || | |||| || | ||| ||| || || |||
Sbjct 86701 ATCGGTGTTGGAGTCGTTGA--GGCGCACGTCCGACACCTGCGTGCTCAGCTGGCTGATG 86758
Query 92057 TTCGGATGGCGCGTGTTCCAAACGCGTGCGTTCTCCACAGGTCTGCCGTAGTATCGTTGC 92116
|| || || |||||| |||| |||| |||| |||| | | ||||||||| || |
Sbjct 86759 TTGGGGTGTCGCGTGGTCCAGGCGCGCACGTTGCCCACCCGCCGGCCGTAGTAGCGGTTG 86818
Query 92117 GCACTCATCGGTGGCGTGATGATCTCGTTTATTCCATTGATACATTGAACGTTTGCGTAA 92176
| || | |||| | ||| ||||| | || || | ||| || ||||| || ||
Sbjct 86819 ACGCTGGCGCGCGGCGGAACGATTTCGTTGACGCCGTTCAAACACTGCACGTTGGCATAG 86878
Query 92177 AAACTTGACGTGTTCAAAAATGTCGAGTACACATATTGGCCGGCGTAACCGTTTTTGTTT 92236
|| | ||||| | ||| ||||| |||| |||||| ||||||||||||||||| |
Sbjct 86879 AAGGAGGCGGTGTTGAGAAACGTCGAATACAAATATTGAACGGCGTAACCGTTTTTGCTC 86938
Query 92237 TGTATCAAATCCTTTATGACACCTTGGGCGAATGAAATTTTTTGCATGACACCCCACACG 92296
|| | || || |||| || || | || | ||||||||||| | | | | | | |
Sbjct 86939 TGCAATTGGTCTTTGATGATGCCGTGTGTGAGTTTAATTTTTTGCAGGGCGCTCGAAATG 86998
Query 92297 TTCACCAACCCGCCGACTTTTTTACTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTG 92356
| |||||| | | | | | ||| || ||
Sbjct 86999 TCCACCAAGCTGTTGTCGTGTTTGGAGTTGAACGCTTTGTTGAGAAAAATGACAAAATTG 87058
Query 92357 TGATCCCACAGTGTGAAGTTGGGCAATATCAAATAGTCTATGTTGTCTGTGAATTTGTTA 92416
|| ||||||| | | |||| ||||| ||||||||||| ||| |||| ||||| |||||
Sbjct 87059 TGGTCCCACAATATAAAGTGTGGCAAGATCAAATAGTCAATGGTGTCGGTGAACTTGTTG 87118
Query 92417 GTTTTTAATTTGTGTAAAAACACA 92440
||||| | ||| | || ||||||
Sbjct 87119 GTTTTGAGTTTCTTCAAGAACACA 87142
Score = 125 bits (138), Expect = 5e-24
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 102691 CCATTGCGAATACATTGCAATCCCTCAGACAAACGATTGCCTACAAAAGATTGGTTTATG 102750
|| ||||| || |||||||| | || | || |||||||| ||||| || || || ||
Sbjct 99217 CCGTTGCGCATCCATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTG 99158
Query 102751 CTCCACTGATCCAGTCGTGTGCCCTCTAATTTCTCATAACCTGTCACATTTTTACCGATA 102810
||||||| || | || |||||||| | ||| || | || || || | |||
Sbjct 99157 GTCCACTGGTCGAAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATG 99098
Query 102811 AACTCTTTGTATATGTTGTCGGGTGTGTTATTAAAAAACATGTAAGGTATATGAAACATA 102870
||||||||| ||||||||||||| ||||| ||||| |||||||| ||||| | ||| ||
Sbjct 99097 AACTCTTTGAATATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGTTAAATATG 99038
Query 102871 GGATAGCGC 102879
|||||||||
Sbjct 99037 GGATAGCGC 99029
Score = 114 bits (126), Expect = 9e-21
Identities = 385/590 (65%), Gaps = 16/590 (3%)
Strand=Plus/Plus
Query 169 TATATGGTAACCGAAGATCCGTTCAGGGGACCCGGCAAGAACGTTCGCATCACTCTGTTC 228
||||| || ||||||| || |||| || |||||||| ||| | ||| |||||
Sbjct 136662 TATATCGTGGCCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTC 136721
Query 229 AAGGAAATCAGACGGGTCCAGCCCGACACCATGAAGCTGGTGTGCAACTGGAGCGGAAAA 288
|| || || | || |||| ||||| |||||||||||| |||||||||||| |||
Sbjct 136722 AAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAA 136781
Query 289 GAATTCCTGCGCACGTCTTGGAGTCGATTCATCTCCGAGGA---ATTCCCCATCACCACC 345
|| || |||| |||||| || ||| | |||||| || ||||| || |
Sbjct 136782 GAGTTTTTGCGTGAAACTTGGACCCGTTTCGT---CGAGGACAGTTTTCCCATTGTCAAC 136838
Query 346 GACCAGGAAATCATGGACTTGTGGTTTGAACTTCAGCTGAGAAAAATGGAGCCCGACCGT 405
|||||||| | |||||| ||| | | | | |||||| | |||| |||||
Sbjct 136839 GACCAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGT 136898
Query 406 TGTTACAAGTTCACAATGCAATACGCTCTGTGTGCCAGCCCCGATTACGTGCCACACAAC 465
||||||||||| ||| |||| || || | |||| |||||||| ||| |
Sbjct 136899 TGTTACAAGTTTTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAA 136958
Query 466 GTGATCCGTCAAC-AAGATCCGTTCTACGTCGGACCCGACAA-CATTGCACACATCAACC 523
||||| || || | || || | ||||| || | |||| | | || | ||||
Sbjct 136959 GTGATTCG-CATCGTCGAACCCATGTACGTGGGCCAGAACAATGAGTACAGA-ATCAGTT 137016
Query 524 TAACAAAGAAAGGTTTC--CCGTT-CCCATTGACGTGTTTGCAGAACGTTTACAACGAAT 580
| | |||| | | | ||| ||| | | | | || | || |||| | | |
Sbjct 137017 TGGC---GAAACGCGGCGGCGGTTGCCCCATCATGAACATACACAGCGAGTACACCAACT 137073
Query 581 GCTTCGAGAGCTTCTTCGACGAAGTACTCTGGCCCTACTTCTACCGTCCTCTCGTGTACG 640
|| || ||| || || || ||||| |||| ||| || ||||||||
Sbjct 137074 CGTTTGAATCGTTCGTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACA 137133
Query 641 TTGGTACCACATCGGGAGAGGTTGAGGAAATTATGATCGAAGTGTCGCTGCTGTTCAAGA 700
|||| ||| || | || | ||||||||| | |||||||||||||| |||||||
Sbjct 137134 TTGGCACCGACTCTGCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAG 137193
Query 701 TTAAAGAATTCGCGCCCGACGTACCCCTCTTCACCGGACCAGCATACTAA 750
||||||| || || || |||| || || |||||||| || ||||| |||
Sbjct 137194 TTAAAGAGTTTGCACCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAA 137243
Score = 95.1 bits (104), Expect = 9e-15
Identities = 163/234 (70%), Gaps = 12/234 (5%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
||||||||| ||||| ||||| | || || ||| || ||||| || | ||| |
Sbjct 106165 AATGCAAATATTTGTCAAAACATTAACGGGCAAAACGATCACAATCGAAACC---AGCTC 106109
Query 27849 CGACGA-----TGTA-CAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGAT 27902
|| || ||| ||| |||||||||||||| ||||||||||||||||| || |
Sbjct 106108 CGCGGAAACTTTGTCTCAA---GTCAAACAAAAAATTGCCGACAAAGAAGGTGTGCCCGT 106052
Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962
|| || || || | || | ||| || ||||| | || ||||| | | ||||
Sbjct 106051 CGATCAACAGCGACTCATCTATGCGGGCAAACAGCTCGAAGACGACAAAACGATCGCCGA 105992
Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||| |||||||| ||| |||| |||| ||||| ||||| |||||
Sbjct 105991 CTACAACATACAAAAAGAAGCCACCGTGCACATGGTGTTGCGATTGCGAGGCGG 105938
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/236 (69%), Gaps = 16/236 (7%)
Strand=Plus/Minus
Query 104754 GTAATCCTTTGCATACACATCACGAACATACAAAACGTTATCGATTTTGTCGTACACCAA 104813
|||||| | || ||||| || || || |||| || | || |||||||||||||
Sbjct 96911 GTAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGTCGTACACCAG 96852
Query 104814 TTGTATTGCGCGATTGACAAATTTGTCTTCATCATAATTTCCATACAAAAACATACGTTT 104873
||| || || ||||||| || || | || || || |||||||||||||| ||
Sbjct 96851 TTGGATGGCACGATTGATGTGCTTCTCCTGGTCGACGTTGCCGTACAAAAACATACGCTT 96792
Query 104874 -CAtttttttGTTGCGTGCATATTGTTTGTCGAAAAAATTGTGTATCAACACGTTATTGT 104932
|| | ||||| | ||| |||||||| |||||||||| ||| | ||| ||||
Sbjct 96791 GCAATGTTTTG-------CGTATAGTTTGTCGTAAAAATTGTGCGCCAAAATGTTGTTGT 96739
Query 104933 TCATCATGATGTTGGGAAA----AGAAAAGTGTCGGCCGTCAATCACAAACGTGCC 104984
|||| | ||||||||||| ||||| || ||||| | || ||||||||
Sbjct 96738 TCATGAGAATGTTGGGAAAGCTGAGAAA----CCGACCGTCCAACATGAACGTGCC 96687
Score = 93.3 bits (102), Expect = 3e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45806 ATTTGGGAGCGCAGTTACGAAGACAACTACACACTCGGTCAACAATTAAGCATACGATTG 45865
|| |||||||| | ||||| ||||| ||||| ||||| ||||| || ||||| || |
Sbjct 101856 ATGTGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATC 101915
Query 45866 ACCACGAATCTCATACAGAGTGGTTTAGATTTTAAACATCA 45906
||||| || || |||||||| || || ||||||||||||||
Sbjct 101916 ACCACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCA 101956
Score = 84.2 bits (92), Expect = 2e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 46187 CACAAATTTATTAATGTCGTGTTTGTGACCGACACAGAAAACTATTTGTACACACAACAC 46246
|| ||| || | || || |||| || |||||| || |||| || | ||||||||
Sbjct 102369 CATAAAATTGTGAACGTGCTGTTCGTCACCGACGTCGACCACTACATGAA-ACACAACAA 102427
Query 46247 AAACTG-TTTTACGTGTACAATTCTATGAAATTCTATTATTATTGTTTAAAAAATAAATT 46305
| ||||| |||||||||| | |||||||| ||||||||||| |||||||||||
Sbjct 102428 TTTTTCATTTTATTTGTACAATTCGCTCAAATTCTACTATTATTGTTTGAAAAATAAATT 102487
Query 46306 TGTTTTTGTGTACGAAGACTACGAAACTTTATATTTTGTGTACACGAT 46353
||| |||| | ||| |||||| || | ||| ||||||||||
Sbjct 102488 TGTGTTTGAAAGTGGCGACAACGAAATGTTGTTTTTGTTGTACACGAT 102535
>seq32113
Length=13445
Score = 102 bits (112), Expect = 6e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||| || ||||||||||| ||||| || ||| ||||| | || || |||
Sbjct 7793 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 7734
Query 27847 ACCG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| || || | ||| || ||| ||||| ||||| ||||| |||| |
Sbjct 7733 TCCGATACTATTGAAAAT--GTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAG 7676
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||||| || ||||| || ||||| |||||||| |||| ||||| | || || |
Sbjct 7675 ATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACT 7616
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || || |||||||| ||| | || ||||| |||||| | ||||| ||
Sbjct 7615 ATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 7564
>seq1641
Length=3631
Score = 86.0 bits (94), Expect = 4e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||||||||| || || || ||||| || ||| ||||| | || ||||| | |
Sbjct 2157 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTCGAGGCCTC 2216
Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908
|| | || || || ||| ||||| || || |||||| |||| || ||
Sbjct 2217 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 2276
Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968
|||||| || || ||||| || |||||| | || || | ||| | ||||| || |||||
Sbjct 2277 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 2336
Query 27969 CATCCAAAAAGAGAGCACTTTGCAT 27993
||| ||||| || ||| ||||||
Sbjct 2337 CATTCAAAAGGAATCCACATTGCAT 2361
>seq48995
Length=1108
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| |||||||||||||| ||| |||||| |||| || || |
Sbjct 220 ATGCAAATTTTTGTAAAAACTCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 279
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || | ||| || ||| |||||| || || || || |||| || |
Sbjct 280 GACACAATTGAAAAT--GTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACC 337
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | ||||| || ||||||||| | || || | |||| ||||| || ||||
Sbjct 338 AACAGAGGCTCATTTTCGCTGGAAAACAACTTGAAGATGGGCGCACATTGTCAGACTACA 397
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| || || || ||||| ||||| || | ||| || | || ||
Sbjct 398 ACATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355168104005868
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