Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq32113 163 7e-35 seq16183 143 6e-29 seq48995 132 1e-25 >seq32113 Length=13445 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||||||||||| ||||| || || || | ||||| | |||||| Sbjct 6439 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 6498 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || ||||||||||| |||||||| || ||||||| ||||||||| || Sbjct 6499 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 6558 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||| || ||||| |||||||| || ||||| || | ||| || || Sbjct 6559 TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGTT 6618 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || || ||||| | |||||| Sbjct 6619 TTTCCAGTAAGTGTTTTGACAAATATTTGCATT 6651 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || ||||||||||||||||| || || | ||||| | |||||||| |||||| Sbjct 6904 TGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGC 6963 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || |||||||| |||||||| || || |||| || || || || || |||||| Sbjct 6964 TTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTT 7023 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || ||||| ||||||||||| || ||||| ||||| || ||||| || || Sbjct 7024 GCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTT 7083 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | ||||| Sbjct 7084 AGTGTCTTGACAAATATTTGCAT 7106 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || | ||| || ||||||||||||||||| |||| || || Sbjct 5973 ACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGT 6032 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| ||| || || |||||||| || || |||||||| || |||| || Sbjct 6033 GCGGCCATCCTCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGGGGAATGCC 6092 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| || || |||||||| ||||| || || ||||| | Sbjct 6093 CTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCTAA 6152 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||| || || |||||||| || || | |||||| Sbjct 6153 AGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 6194 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | || | ||||||||| || |||||||| || ||||| || | ||| || Sbjct 7569 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGT 7628 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| ||||||| ||||| || ||||| || | |||||||| || ||||||| || Sbjct 7629 GCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 7688 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || || || ||| || ||||| || || || || |||||| || | Sbjct 7689 TTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAA 7748 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || || || ||||| || || || ||||| | ||||||||| Sbjct 7749 AGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||||||||| || || || || || | || || | ||||| |||||||| Sbjct 6219 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCCTCCAGCTG 6278 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| ||||| || || |||||||| || || |||| || || ||||| |||||||| Sbjct 6279 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 6338 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || ||||| || ||||| ||| |||||| || | || || || || || || Sbjct 6339 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTAATAGTTTTCCCTGT 6398 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| | |||||| Sbjct 6399 CAGTGTCTTTACAAAGATCTGCAT 6422 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| || ||||| ||||||||||| || || | ||||| | |||||| Sbjct 7123 AGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 7182 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||| || || |||||||| || || || ||||| || | || || ||||| Sbjct 7183 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 7242 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || |||||| ||||| || |||||||| |||||| || | ||| || || Sbjct 7243 TGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTT 7302 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || ||||| | ||||| Sbjct 7303 TTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || || ||||| || |||||||| | | || | ||||||||||| || Sbjct 7360 TGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAGTTGT 7419 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || || | ||||| || || |||| || || ||||| ||||||||| Sbjct 7420 TTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTT 7479 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||| |||||||| ||||| || ||| ||||| | |||||| || ||||| || Sbjct 7480 GCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGATGGTTTTTCCTGTA 7539 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| | ||||||| Sbjct 7540 AGAGTCTTAACAAAGATCTGCATT 7563 >seq16183 Length=3749 Score = 143 bits (158), Expect = 6e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || || || || || || || | || || | ||||||||| |||||||| || Sbjct 198 AGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGTCCATCTTCAAGCTGCTTTCC 257 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || || ||||| | ||||||||| ||||||| ||||||||| || || || || || Sbjct 258 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTT 317 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || |||||||| ||||||||| ||||| || || ||||| ||||| || || || || Sbjct 318 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGT 377 Query 211097 CTTTACAAACACCTGCATT 211115 ||||||||| | |||||| Sbjct 378 CTTTACAAATATTTGCATT 396 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || || ||||| ||||| || | || || | ||||||||||| || Sbjct 876 GTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGCGTGCGCCCATCTTCCAGTTG 935 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || || | |||||| || ||||||| ||||||||||| || ||||| Sbjct 936 CTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGTATCTT 995 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || ||||||||||| || ||||| ||| || || | ||||| || || || || Sbjct 996 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 1055 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||| ||||| || | ||||| Sbjct 1056 TAAAGTTTTTACGAAGATTTGCAT 1079 Score = 105 bits (116), Expect = 2e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||||||||| || || || ||||| || || | |||||| ||||| |||| ||||| Sbjct 10 CCATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGAATGCCTTCT 69 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| |||||| || || |||||||| |||||||| ||| || || | || Sbjct 70 TTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTA 129 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || || || ||||| | ||||| Sbjct 130 ATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 167 >seq48995 Length=1108 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| || |||||||| || ||||| || | || || | ||||||| Sbjct 203 AGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCT 144 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| ||||| || || | |||||||| ||||||| ||||||||||| Sbjct 143 TCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCT 84 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || ||||| || || ||||| ||| || || | |||||| || Sbjct 83 TGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTT 24 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || || || || ||||||||||| Sbjct 23 TTCCCAGTCAGTGTCTTTACAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156774490862660