Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq20 127 2e-24
seq21476 93.3 4e-14
>seq20
Length=148542
Score = 127 bits (140), Expect = 2e-24
Identities = 302/457 (66%), Gaps = 17/457 (4%)
Strand=Plus/Minus
Query 101928 CAAAAACGGATACGCTGGCCAGCATTTATACTCGACATTTTTAAACACTGCCAGTTTTTA 101987
||||||||| ||||| | || |||| || ||||| ||| | ||||| ||| || ||
Sbjct 86935 CAAAAACGGTTACGCCGTTCAATATTTGTATTCGACGTTTCTCAACACCGCCTCCTTCTA 86876
Query 101988 TGCAAGCGTTCAGTGCTTTAATGGTATCAACGAAATTATACCACCGCGTTCTTCGATACA 102047
||| | ||| ||||| || || || |||||||||| | || ||||| | | |
Sbjct 86875 TGCCAACGTGCAGTGTTTGAACGGCGTCAACGAAATCGTTCCGCCGCGCGCCAGCGTCAA 86816
Query 102048 ACGATATTTTGGCCGGCAGCTGAGCAACATTAAAGTGTGGAATACACGTCATCCTAATAT 102107
|| || | ||||||| | || ||||| | | |||| || || || || || ||
Sbjct 86815 CCGCTACTACGGCCGGCGGGTGGGCAACGTGCGCGCCTGGACCACGCGACACCCCAACAT 86756
Query 102108 TTCACAGTTGTCCACTCAAATTTCAAGAGTTGTCGCGCATGACACTCAA-GAATATAAC- 102165
||| || ||| || | ||||| | || ||||| || | |||
Sbjct 86755 CAGCCAGCTGAGCACGCA----------GGTGTCGGACGTGCGCCTCAACGACTCCAACA 86706
Query 102166 -----TGGAATATAAAAGTTGGTTTAGGTACTTTTGTTGGAGCCAATCGTGACTGCGACG 102220
||||| | ||||| || || || | ||| || ||||| || ||||| |
Sbjct 86705 CCGATTGGAACGTCAAAGTGGGCTTGGGCATATTTCCGGGCGCCAACACCGATTGCGATG 86646
Query 102221 GCGACAAAGAGGTCATCACTTATTTACCGTATCCGAATTCTTTAATTGATCTGGAATCGT 102280
|||||||| | ||||||| | | | ||| | || || | | || || ||||| | |
Sbjct 86645 GCGACAAAAAAATCATCACCTTTCTGCCGCAACCCAACAGTCTCATCGACCTGGAGTGTT 86586
Query 102281 TATTGTACTGCGACCCCGTGTTTAGTTTCATATGTTTTGACAAAAATAAATTGGCCTTTG 102340
|||||||| ||||||| ||||| ||||||||| || ||||| ||| | | ||| |
Sbjct 86585 TATTGTACGGCGACCCGCGGTTTAATTTCATATGCTTCGACAAGAATCGACTCAGCTTCG 86526
Query 102341 TCTCGCAGCAAATATACTATTTGCACAAAAACATTGA 102377
| || || ||||| |||||| || ||||||||||||
Sbjct 86525 TGTCCCAACAAATTTACTATCTGTTCAAAAACATTGA 86489
Score = 114 bits (126), Expect = 1e-20
Identities = 265/397 (67%), Gaps = 23/397 (6%)
Strand=Plus/Minus
Query 110935 CCGTTGCGCACACAATGCAAACCCTCGGGTAAACGATTTCCCATAAACGACTGATTTATA 110994
|||||||||| || ||||||| || | | ||||| |||| |||||||||||| |
Sbjct 99217 CCGTTGCGCATCCATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTG 99158
Query 110995 CTCCATTGATCGAGACGTGTTCCTTCCAATTTTTCATAACCCGTAATACTGCGACCTATA 111054
|||| || |||| ||| || || |||| |||||| | ||||| ||| ||
Sbjct 99157 GTCCACTGGTCGAAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATG 99098
Query 111055 AATTCTTTGTAAATGTTATCCGGTGTGTTGTTGAAGAACATGTAAGGTATAAGATATATG 111114
|| |||||| | ||||| || || |||||||| || |||||||| ||||| | |||||
Sbjct 99097 AACTCTTTGAATATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGTTAAATATG 99038
Query 111115 GGATA------CACTCTACCGTTAACATAA-----------CACAATTTAGTT--GGTAA 111155
||||| | | | || || || ||| | || || | | |
Sbjct 99037 GGATAGCGCGGCGCGTTCGGGTCGGCAAAATTTCCACCGCGCACCACGTACTTGCGCTCA 98978
Query 111156 A--TTATCAAAATTAGACTGCCTGGACAAAAAGGAAATGGGCGATAGGCAAATTTGAGCG 111213
| | ||||| || ||||| | |||| ||| || | |||||| ||||| ||||| |||
Sbjct 98977 ATGTCGTCAAAGTTGGACTGGCGCGACAGAAACGAGACGGGCGACAGGCAGATTTGTGCG 98918
Query 111214 TGCACTCCGTCGTCGGACGCCCATTTAGATAAATCCTCCGCT-TCGTTTAAAACACCTTT 111272
||| ||||| || | | ||| | | | || || |||| | ||| || || || ||
Sbjct 98917 TGCGTGCCGTCTTCCGCCATCCACTCGGTCAGAT-CTTCGCTCTTGTTGAACACCCCCTT 98859
Query 111273 CTGACCGTGGATACCGCATATTTTTAAACCTTCCAAA 111309
|| |||||||| ||||| ||||| | || || |||
Sbjct 98858 TTGGCCGTGGATGCCGCAAATTTTGACGCCCTCTAAA 98822
Score = 107 bits (118), Expect = 2e-18
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 54954 ATATGGGAGCGCGGCTACGAAGACTATTATACATTAGGTCAACAGTTGAGCATCCGCATG 55013
|| |||||||| |||||||| ||| |||| || | || |||||||||||||| |||||
Sbjct 101856 ATGTGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATC 101915
Query 55014 ACCACGAATTTGATACAAAGCGGGCTTGATTTTAAACATCAA 55055
||||| || ||||||| |||||| | |||||||||||||||
Sbjct 101916 ACCACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCAA 101957
Score = 107 bits (118), Expect = 2e-18
Identities = 205/299 (69%), Gaps = 10/299 (3%)
Strand=Plus/Plus
Query 178 GAAGATCCATTCCGTGGGCCTGGTAAAAATGTTAAAATTACTTTATTCAAAGAAATTCGT 237
||||| || ||| ||||| || ||||| || | ||||| |||||||| |||||
Sbjct 136674 GAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTCAAAGAGATTCGC 136733
Query 238 CGCATTCAGCCAGATACAATGAAATTGGTGTGCAACTGGAGTGGCAAGGAATTTTTGCGT 297
| |||| || || ||||| ||||| ||||||||| ||||| || |||||||||
Sbjct 136734 AATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAAGAGTTTTTGCGT 136793
Query 298 GAAACCTGGACGCGTTTCATTTCCGAAGA---GTTTCCCATCACCACCGACCAAGAAATT 354
||||| ||||| |||||| | ||| || |||||||| || |||||| || |
Sbjct 136794 GAAACTTGGACCCGTTTCGT---CGAGGACAGTTTTCCCATTGTCAACGACCAGGAGGTG 136850
Query 355 ATGGATCTGTGGTTTGAATTGCAACTGCGACCAATGCAGCCCAACAGATGTTACAAATTT 414
||||| ||| | | | | ||| |||| | | ||||||| | |||||||| |||
Sbjct 136851 ATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTGTTACAAGTTT 136910
Query 415 ACAATGCAATACGCCCTGGCCGCT--AACCCAGACTACGTTGCTCATGACGTGATTCGC 471
||| |||| || ||| | || | || ||||| | || || |||||||||
Sbjct 136911 TTGGCTCAACACGCGCT--CCGTTGGGACGCCGAGTACGTGCCGCACGAAGTGATTCGC 136967
Score = 93.3 bits (102), Expect = 4e-14
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
|| |||| || || ||||||| || | ||| ||||||||||| || || |||||
Sbjct 105938 CCGCCTCGCAATCGCAACACCATGTGCACGGTGGCTTCTTTTTGTATGTTGTAGTCGGCG 105997
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
| ||| ||||| || ||||||||||||||| | || || ||||| || ||| ||||
Sbjct 105998 ATCGTTTTGTCGTCTTCGAGCTGTTTGCCCGCATAGATGAGTCGCTGTTGATCGACGGGC 106057
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGA 39208
|| | |||||||| ||||| |||||||
Sbjct 106058 ACACCTTCTTTGTCGGCAATTTTTTGTTTGA 106088
>seq21476
Length=1652
Score = 93.3 bits (102), Expect = 4e-14
Identities = 224/330 (68%), Gaps = 8/330 (2%)
Strand=Plus/Plus
Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774
||||||| | ||||| |||||| | |||| | |||||||| |||| | |
Sbjct 839 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 898
Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832
| || || | ||||||||||| ||||| ||||||| || |||| | || || || ||
Sbjct 899 AATATAATAAGGGTTTGTTTTATTATGTATTGTGGAATATATGTG-ATCGTAAAGAA-TG 956
Query 14833 GATGAACCAAAATGTGCTTGACCAATTTTG-GAA-ATACGTTAAACTTCGCTTACAAAAC 14890
|||| ||| |||||| | || |||| ||| ||| ||||| | | | ||||
Sbjct 957 GATGGACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTACCGAAAC 1016
Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950
| | |||| | | ||||| | || |||||| |||| || || |||| ||||||
Sbjct 1017 A--AAATGCTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTA 1074
Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010
| |||| || ||||| ||||| || | || || ||||||||||| |||| |
Sbjct 1075 CCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGCG 1134
Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040
|||||| |||| ||||| ||| | ||||
Sbjct 1135 CATTACTCCAAAGAAAGGTTGCAAAATTAT 1164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428707546332692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |