Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031023.1 Length=32649 Score E Sequences producing significant alignments: (Bits) Value seq7607 737 0.0 seq1464 143 6e-30 seq3145 107 4e-19 seq14859 104 5e-18 >seq7607 Length=81728 Score = 737 bits (816), Expect = 0.0 Identities = 970/1337 (73%), Gaps = 12/1337 (1%) Strand=Plus/Minus Query 621 AGGAGCAAAGATTGAACTTGCAAAACGCAGATTCttttt-ttATTGCAATTTAATCATGC 679 ||| || || |||| | |||||||| | ||| |||| ||||||| | || || |||| Sbjct 69676 AGGCGCCAAACTTGAGTTAGCAAAACG-ATATTTTTTTGATTATTGCCACTTGATTATGC 69618 Query 680 CTAAATTTTACGAGGTGCATCGTGAATATTTAGTTCACTTATGTGATGAGTTGCAAAATT 739 | ||||| || | | || || | ||| |||||| ||||| || | Sbjct 69617 CATCGTTTTATAAGCCAGACAGAGATTACCTTGTTTCTATATGTGGAGAGTTTCAGTCAT 69558 Query 740 TCTTAAATGATGACGAACATGACGTTCTGATTATTAATTTGCCTCCGTAGCTAAGACATG 799 || | ||||| | ||||| || || || | ||||| |||| || ||||||| Sbjct 69557 TCCTTAATGACAATGAACACGATGTGCTTGTGCTTAATATGCCGCCT------AGACATG 69504 Query 800 GAAAATCTCTCACGCTTGGTAAATTTGTAGAGTGGGTGCTTGGTAAAGACCATACGAAGA 859 | || || | || ||||| ||||| || ||| | | || || || |||| |||| Sbjct 69503 GTAAGTCCTTAACACTTGGACGGTTTGTCGAATGGATATTAGGGAATGATCATAGCAAGA 69444 Query 860 AAATCATGACTGGTTCATATAACGAAACTCTCTCCACAGTCTTTTCTAAAAATGTTCGTA 919 |||| |||||||| ||||||||||| || || || || || ||||| || ||||| | | Sbjct 69443 AAATTATGACTGGATCATATAACGAGACACTATCGACCGTATTTTCCAAGAATGTGAGAA 69384 Query 920 ATACACTTCAAGAAGAGAAAGCAGACGAGAAGAAAATCGTTTACTCTGATATTTTCGATG 979 | ||| | ||||||| ||||| || | | | || || ||||| |||||||| |||| Sbjct 69383 ACACAATCCAAGAAGTAAAAGCCGATAAAGATATGATAGTCTACTCCGATATTTTTGATG 69324 Query 980 CTGCAATTAAATATGGAGATGCTGCGAAAAACCTCTGGAGCTTATCAGACGGTTATAACA 1039 | || |||||||| |||| || | || || ||||| || ||| || ||||| | Sbjct 69323 CGAAGATAAAATATGGTGATGGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTATAATA 69264 Query 1040 ACTATTTGGCAACCTCTCCAACAGGGACTGCAACAGGTTTTGGTGCTGACATTATTATCA 1099 |||| |||| || || ||||| || || || || ||||||||||| ||||| ||||||| Sbjct 69263 ACTACCTGGCCACATCGCCAACTGGTACAGCTACTGGTTTTGGTGCAGACATAATTATCA 69204 Query 1100 TTGATGATGTTATCAAGAATGCTGAGGAAGCTAACAACGCGACAATATTAGAAAAACATT 1159 ||||||| || |||||||| || || ||||| |||||||| || | || || ||||||| Sbjct 69203 TTGATGACGTAATCAAGAACGCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAACATT 69144 Query 1160 GGGACTGGTTTGTTAATACCATGCTTTCACGTTTGGA-ATCAAGCGGTAAAATCATAATT 1218 |||| |||||||| ||||| ||||| || ||| | || | ||| |||||| ||||| || Sbjct 69143 GGGAATGGTTTGTAAATACTATGCTATCCCGTCTTGAGAGCAA-CGGTAAGATCATTATC 69085 Query 1219 AACATGACTCGTTGGCATAGTGAAGATTTAGCCGGACGTGCTTTGCGTGAATTGCCTAAA 1278 ||||||||| | |||||||| | ||||| || || | || || |||||||| Sbjct 69084 AACATGACTAGATGGCATAGCAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCCACTT 69025 Query 1279 AATGGCTATCGAGTAAAGCATATTAA-TTTCAAGGCTTTCAACGAGCAAACGAATGAAAT 1337 | || ||| || ||||||||||| ||||||| | | | | |||||| | | | Sbjct 69024 AGCGGGTATAAGGTTAAGCATATTAACTTTCAAGCGTATGATGAAAAAAACGATCGGA-T 68966 Query 1338 GCTTTGTGATGATGTTCTGACTCTTGAAGATTATAAGCGCAAAGTAAAAACAATGGGGGC 1397 |||||| || |||||||| || ||| ||||| ||| |||| ||||| ||||| || Sbjct 68965 GCTTTGCGAAGATGTTCTTTCTTATGAGGATTACCTGCGTAAAGCTAAAACGATGGGTGC 68906 Query 1398 TGATATTGCCAGCGCCAACTACCAACAAGAGCCGATTGATGTCAAAGGTCGATTATATAG 1457 || || || ||||||||||||||||||||||| || || | ||||| |||| || | Sbjct 68905 GGACATCGCTAGCGCCAACTACCAACAAGAGCCTATCGACATTAAAGGGAGATTGTACGG 68846 Query 1458 TGAGTTCAAGACTTACAATGCTCGTTCGGAGTACAAAAAGATTTGGAACTATTGCGATAC 1517 ||||||||||||||| | | | || | || || ||||||||| | ||||||||||| Sbjct 68845 TGAGTTCAAGACTTATAGCAATAGATCCGCCTATAAGAAGATTTGGCATTATTGCGATAC 68786 Query 1518 CGCAGACACTGGGAAAGACTATCTCTGTTCGATTGTGTGGGGTGAAACCTCAGACGGCTT 1577 || || ||||| || ||||| || |||||||| || ||||| ||||| ||| |||| Sbjct 68785 TGCCGATACTGGTAAGGACTACCTTTGTTCGATCGTTTGGGGAGAAACGCTAGATGGCTA 68726 Query 1578 TGCGGATGTGCTAGACATTATTTACACTCAAAAGCCGATGGAGTACACAGAAAACGCAGT 1637 | ||| || ||||| | || || |||||| |||| ||||| |||||||| | ||||| Sbjct 68725 TCAGGACGTTTTAGACGTCATCTATACTCAACAGCCAATGGAATACACAGAGAGTGCAGT 68666 Query 1638 GGCCAATCAATTAATTAATAACAGAGTGAATGTGTCAAGAATCGAGCGAAATAATGGCGG 1697 || ||||| || ||||| || ||||||| || | |||||||| || || ||||| Sbjct 68665 TGCAAATCAGTTGATTAACTTCAAAGTGAATACATCGCGTATCGAGCGCAACAACGGCGG 68606 Query 1698 TCGGTCTTTTGCTCGTTCTGTCAGGGATAAGATTCAAGGCAAAGTGGCTTGTGTTGTAGA 1757 ||||||||||||||||||||| || || || | |||| ||| || |||| | Sbjct 68605 TCGGTCTTTTGCTCGTTCTGTAAGAGAGAAAGTAAAAGGAAAATGTGCAACTGTTATTTC 68546 Query 1758 AGATTTCTTCCAAGGGAATAATAAAGAAGCCCGAATTTATTCCAATAGTTATTGGATAGA 1817 || ||||| ||| | | ||||||||||| |||| |||||||||||| | ||||| || Sbjct 68545 CGACTTCTTTCAAAGCACCAATAAAGAAGCGAGAATCTATTCCAATAGTCACTGGATTGA 68486 Query 1818 GCAGCACGTTCGATTTCCTAATGACTGGCGAACTCGTTTTCCAGAATACTATCAAGCAAT 1877 || | || ||| | |||| ||||||| |||| | ||||| || |||||| | || || Sbjct 68485 ACAATATGTACGAATGCCTAGTGACTGGAGAACAAGATTTCCTGATTACTATAAGGCGAT 68426 Query 1878 GACGACTTATCAACGTGAAGGTAAAAATAAACACGATGATGCGCCCGATGCAACAACTGG 1937 ||| |||||||| ||||| || || ||||| |||||||| || ||||||||||| || Sbjct 68425 GACTACTTATCAGAAAGAAGGAAAGAACAAACATGATGATGCTCCAGATGCAACAACAGG 68366 Query 1938 GATTGCTGAGACAATGA 1954 || || || ||||||| Sbjct 68365 CATCGCCGAAACAATGA 68349 Score = 318 bits (352), Expect = 1e-82 Identities = 685/1027 (67%), Gaps = 54/1027 (5%) Strand=Plus/Minus Query 8197 CTTTTGTTTTTA--AGGAGAAATCAAAATGGAATTAACGATTAATGAAAAACAGTATGTT 8254 ||||| |||||| |||| ||| |||||||||||| |||||| || ||| ||||| Sbjct 59600 CTTTTATTTTTAGGAGGATGAAT--AAATGGAATTAATGATTAACGACAAAGAGTATAGC 59543 Query 8255 TTTATCTTCGGTTACCGATTCATTAAGGAATTGAATaaaaaaaaTGAAGTAACAGAACGT 8314 ||||| || || | | || || ||| |||| | | || || ||||| Sbjct 59542 TTTATTTTTGGATTTGGGTTTATCCGTGAAATGAACCGCAGATATTCCGTTGTAGAACAA 59483 Query 8315 GGGATGACTTTAAAAGTCGGTTTAGATAATGCTTTGATGAACTTCTTTAGTGGAGATATC 8374 || ||||| | ||| | || || ||| | | |||| ||||||| | ||| || Sbjct 59482 GGAATGACAATGAAACTGGGCTTGGATTCAACACTCGTGAATTTCTTTAACGAAGAAATT 59423 Query 8375 GAAACACTTGTTGAAATGTTAAAAATTGCCAATGCAACAGAAAATCCTCGTGTCTCTGAG 8434 |||||| | |||||||||||||| | || || |||||||| || || || |||| Sbjct 59422 GAAACATTGATTGAAATGTTAAAAGTAGCAAACGCAACAGAGTCACCACGAGTTGCTGAA 59363 Query 8435 AAAGGGATAGTTGAATGGATTGAAGAAAATGGAGCTGATGCGCTTTTTGATTTAGTACTC 8494 |||| | ||| | | |||| |||| ||| | ||| || ||| |||| ||| | Sbjct 59362 AAAGATTTGATTGCCTTGGTTGATGAAATTGGCTCGGATAAACTCTTTAATTTGGTATTG 59303 Query 8495 GAAGAGTTAAAAAAGTCGGAATTTACCAAGaaaaaaaCGTTGAACTTCGAGAAAGAAGTC 8554 ||||| |||||||||||||||||||| ||||||||||| | || |||| || || || Sbjct 59302 GAAGAATTAAAAAAGTCGGAATTTACAAAGAAAAAAACACTAAAGATCGAAAACAAAATC 59243 Query 8555 AGCAAAAATCTACAGTAACAGATTTTGACA-AACTCTATGAACAAGTTCAGTTAAATTGT 8613 | || | | || | ||||||| ||| |||| || || |||||||| Sbjct 59242 AAAAACAGCAAATAGAAGAAGATTTTTACACAACT----------GTCCAAATAAATTGT 59193 Query 8614 TTGCGTTATCTCGGAATTACTAATCTAAGAGATATAGAGCGCATGACCATTTCGGAGTAT 8673 |||||||||| || ||| || | | |||||| || || ||||| || ||| ||| Sbjct 59192 CTGCGTTATCTAGGGATTTCTGACTTTCTAGATATCGACCGAATGACAATGCTGGAATAT 59133 Query 8674 GAATTAAGGCTGAAAGCTTATAGGCTAAAAAGACTTGATGAGCAAGAATCTATTTACCAA 8733 ||| |||| | | || ||| | || || || | ||||| ||||| ||| | | Sbjct 59132 GAAACAAGGATTATTGCCTATCGTCTTAAGAGGTTAGATGAACAAGAGCTTATACATTAC 59073 Query 8734 CAAGCATGGGCAAATTGGCAAGTTCAATCAACTAAACAACAAGGTAAGAAGCAAGTTCCA 8793 ||||||||||| ||| ||||||| || | |||||| ||| ||||| | | ||||| Sbjct 59072 CAAGCATGGGCGAATAGGCAAGTCAAAGCTACTAAAAAACGTGGTAAATACGAGGTTCC- 59014 Query 8794 GTTTATTCG--ACCTTCAAGAAGTTTTTTGATAAAGAAAAATTTGAAAATGATATTTTAG 8851 |||||| | |||||| | || || ||| | ||||||||| ||||||| | || || | Sbjct 59013 -TTTATTTGATACCTTCGAAAAATTCTTTAACAAAGAAAAACTTGAAAACAAAATCTTGG 58955 Query 8852 GAATCGAAACTTCGGACAGTGCTTTtaaaaaggacaaaaaactaattaacctcatgaaaa 8911 | | || | ||||| || | | | ||| ||| || Sbjct 58954 GCAAGGA-----------------TGAAAAAATACCTAGA--TTTGTAAACTCCTG---- 58918 Query 8912 aagcaaataagtaagaaaggaggaaaaaCATGGAATCTTATAGTGTAGAAGCGGTTCTGA 8971 | ||||||||||||| |||||||| || || | ||||| || || Sbjct 58917 ------------AGGAAAGGAGGAAAACTATGGAATCATACAGCCTCGAAGCAATTTTGT 58870 Query 8972 GTGCTGTTGATAAAAATTTCACTTCAACCATGAATAAAGCAGATAGTTCAATGGGAACAT 9031 ||||| |||||||||||||| || || ||||| | ||||| | |||||||| Sbjct 58869 CCGCTGTCGATAAAAATTTCACATCTACAATGAAGGACGCAGACAACTCAATGGGCGGCC 58810 Query 9032 TGGACAAGAACTCACAAAATACAAATACTTCTATCCTAGATATTGCTAAAGGGGTTGGAG 9091 | || | || | | || ||||| ||||||||||| || || || ||||| || || | Sbjct 58809 TTAACGATAATACTAAGAAAACAAACACTTCTATCCTCGACATCGCAAAAGGTGTCGGGG 58750 Query 9092 TTTTTAAACTTGTTGATTCTGCGATTGGTGTGGTAAAAAGTTCATTGGATGGTGCAATTA 9151 ||||||| | |||||||| || |||||||| || | || ||||| | || || ||| Sbjct 58749 TTTTTAAGTTGGTTGATTCGGCTATTGGTGTTGTTACAAACTCATTAGGCGGAGCCATTG 58690 Query 9152 ACCGTTTTGATACGTTAAACGCCTATCCGAAAGTAATGGCTCAAATGGGCTATTCTACTG 9211 | ||||| ||||| || || || || || ||||| ||| |||| ||||| |||| Sbjct 58689 ATCGTTTCGATACATTGAAACAGTACCCAAACATAATGCGGCAACTGGGATATTCAACTG 58630 Query 9212 ATGATGT 9218 | || || Sbjct 58629 ACGAAGT 58623 Score = 217 bits (240), Expect = 3e-52 Identities = 439/642 (68%), Gaps = 12/642 (2%) Strand=Plus/Minus Query 12990 GGTGAAGAAGTTGGGGACGGTTATGGGCGAAGACTTGAATTTTCAGATGTTGAATGGAAA 13049 ||||||||||| || || |||||||| |||||| | |||||| | || | ||||||||| Sbjct 54458 GGTGAAGAAGTCGGCGATGGTTATGGTCGAAGAATCGAATTTGCGGACATAGAATGGAAA 54399 Query 13050 AAGTCTAATGGTAAACCACTTGATAAGCCAAAAGGCCAAAATTGGATTGAATATCCAGAA 13109 || || ||||| ||| | || || || ||| |||||||| ||||| |||| ||| Sbjct 54398 AAATCAAATGGCGCACCTTTAGACAAACCGTTAGGAGAAAATTGGCTTGAAGATCCGGAA 54339 Query 13110 ATGACAGAAGAATACGGCATTCCG---TCAAATGGAAAAATGCTTCCTCGGAAAACAGTG 13166 |||| | ||| || |||||| | ||||||| |||| || ||||||| Sbjct 54338 GCAACAGCAAAATTTGGTATTCCGCAACCTAATGGAACAATGAGGAAACGAGAAACAGTT 54279 Query 13167 GTTGTCTTTGATGATGTGGAAGATGCAGACGAGCTTTTACAAAAGACTTATGAAAAACTG 13226 || | || |||||| | |||||| || ||||| |||||||| |||||||| | | || Sbjct 54278 GTGATTTTCGATGATATTGAAGATCCAACAGAGCTATTACAAAAAACTTATGAGACATTG 54219 Query 13227 GCTTATTACTGCC-GGCCACTCGTTCAGTTTAGTACTGAGATATTAGGCAGTGACTCAAT 13285 | | | || || | || | | ||||||| ||||| | ||| ||||| || Sbjct 54218 G-TGGGTGCTTCCAGACCTTTAGCACAGTTTAAAGCTGAGGTGACAGGGAGTGATGTCAT 54160 Query 13286 TGGAAATACTGTTTCAATTCACAGAGGAGACCGAAATTATCACTATCAGACAAGAGTCTT 13345 ||||||||| || ||||||| ||| || || ||||||||||||| || ||| |||| Sbjct 54159 TGGAAATACAGTGACAATTCATAGACATGATCGTAATTATCACTATCGTACTAGAATCTT 54100 Query 13346 TAAAGTGGTTACTGACCATGTTAATGGAC-GAGTGCAAGCTAGTTTAGGTGATAATTTAA 13404 |||||| | | ||| | | | ||| | || ||| | || || ||||| ||||||| Sbjct 54099 CAAAGTGAGAATTAACCGTTTAACTGGCCAGACCTCAATCGAG-TTGGGTGACAATTTAA 54041 Query 13405 GTGGCAACTCT-CTCAATCGTCAGTTATCGAAGATTCAAAGTAATATCTCAGACCTTGAT 13463 ||| | | | | | || | | || | ||| | || ||| || | || || Sbjct 54040 ---CCAAAGATGCACGA-AGACAATCAGCGCAAATTTCGAATAGTATTTCTAATCTGGAA 53985 Query 13464 AATAATAAAATGACTTTCTTTGAATCAACTGAAATCGGAAAGTATCAAGATGATATTATG 13523 ||||| |||||||||| |||||||| |||||||| || | |||||||| || ||| Sbjct 53984 TCAAATAAGATGACTTTCTACGAATCAACCGAAATCGGTAAATTCCAAGATGACATCATG 53925 Query 13524 CGTGGTGCTGGTGCCAATGGTGGGTCAATTTATATGGTCAATGGGATTGAAGCGGGCGTT 13583 ||||| || || |||||||| || || | || | ||||| ||| | || || Sbjct 53924 CGTGGCGCAGGGAAAAATGGTGGTTCGATCCTTTTGATGAATGGTCAAGAAACTGGTATT 53865 Query 13584 TCTCAATCAAGAGAAACTTATGAGCAAGTCTTTATGGATGGT 13625 ||| | ||||| | ||| || || |||||| ||||| Sbjct 53864 TCTGACGGCAGAGAGCCCTATCAGATGGTTTTTATGAATGGT 53823 Score = 188 bits (208), Expect = 1e-43 Identities = 597/915 (65%), Gaps = 13/915 (1%) Strand=Plus/Minus Query 3367 AAACGTGAGAAAGCTTGGCAAGAGCAACAAATCAAAGATGACACCAAACGCATGAAACAA 3426 ||||||||||||||||||||| ||||||| || |||||||| | ||||||||||| | Sbjct 66000 AAACGTGAGAAAGCTTGGCAACAGCAACAGATTAAAGATGATAAGAAACGCATGAACGAG 65941 Query 3427 ATCATGGATAAGCTATTTGAA---GCTCAAGAAGCCATTCAAAAAGAAATCAATGCCAAC 3483 |||| || ||| | || || ||||| || || || ||||| || | || | Sbjct 65940 ATCA---ATCAGCGTCTGCAATATGCACAAGATGCGATACAGAAAGAGATAGACGCACAG 65884 Query 3484 TGGCAGAACTTTGCGAATGGTCAAGGAATTTCTATCAGTGAAGCCATGAAACGTGCGGAT 3543 ||| | | ||| | ||||| || ||| || || ||||| ||||| || || | Sbjct 65883 TGGGACAGTTTTTCCAATGGACAGAAAATCACTCGTAGCGAAGCGATGAAGCGAGCTAAC 65824 Query 3544 AAAATGGATGTCAAAGCATTTGAAAATAAAGCCAAAAAGTATGTTAAAGAAAAAGACTTT 3603 |||||||||| |||||||||| || || || ||||||||||||||||||||||| Sbjct 65823 GAAATGGATGTAAAAGCATTTGCTCGCAAGGCTAAGAAGTATGTTAAAGAAAAAGACTTC 65764 Query 3604 TCGAACCAAGCAAATCAAGCGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTA 3663 || |||||| | | || || || || || | || ||| | || ||||| || Sbjct 65763 TCTCCGACAGCAAACAAGGAATTAAAGCTATACAATCTTACGATGCGTGTTAATCGATTG 65704 Query 3664 GAACTTCTGAAAGCAAATATTGGTCTGGAGCTTATTTCAGTATTTGATGACTTGGACAAA 3723 ||| | || || || ||||| || || || || ||| | | || | || |||| || Sbjct 65703 GAATTACTAAAGGCGAATATCGGACTTGAACTGATTGCTATGTTCAACGATATGGATAAG 65644 Query 3724 TATTTCTCA-AAGAATTTGACTGGTGCAGCTCTTACAGAATTTGAAAGACAAGCGGGAAT 3782 ||||||||| ||| || ||| | || | | | |||||| || | ||||| || | Sbjct 65643 TATTTCTCAGGAGAGCTT-ACTAGCGCTGGCTTGAAAGAATTGCAACGTCAAGCAGGCA- 65586 Query 3783 TCTTGGTTTAAGCGTTC-CAAAGAAAGGCTATAACAGTCTAGTTGAATCAGTTCTTAACG 3841 |||| | || || | || | || ||| || ||||| || ||| | || Sbjct 65585 TCTTAGAAATGACGATCGCTAAAAGTGGTTATGCCAAGCTAGTGGAGCAAGTAATCAATA 65526 Query 3842 GAAGTTATAAGGTCGAAGGATTTGCCAGTTTTTCTGACAAGCTTTGGCAGTACCAATTTG 3901 | | | | || || || || | ||| || ||||||| ||||||| | Sbjct 65525 GTTCGTTTCGAGCGGATGGTTTCGCAACGTTTAGCGAACGGCTTTGGATGTACCAAGCAG 65466 Query 3902 AATTGAAAGCTGATATTGAAAAACTTCTCATTCGTTCAGTAACTGGTGGAATCAACCCGA 3961 | |||||||||||| | || || | || | ||| || ||| ||| || || | Sbjct 65465 AGTTGAAAGCTGATCTGGATAAGTTGCTGGTACGTAGTGTGACTTTAGGACGTAATCCCA 65406 Query 3962 AAGCACTAG-CCCCACAACTAAAAAGGCTGATGACTGAACAAGGAAGAATGAATGCCACA 4020 || || | | | | || ||| |||| | | || ||| |||| ||| |||| | Sbjct 65405 AA-CAGTTGTCATCTGAATTAAGAAGGTTCCTTACCGAAAAAGGCAGAGAGAATACTCGT 65347 Query 4021 TACAACGCACAACGATTACTAGTAACAGAAACAACACGAGTTCAAACAGCTATTCAAGAA 4080 | ||| | | || || | || |||||||| || | ||||| | | ||| ||||| Sbjct 65346 TTCAATACGGAGCGGTTGATGGTCACAGAAACGACTAGGGTTCAGATTGGTATCCAAGAG 65287 Query 4081 GAAAGCTATAAAAAAGCTGATATTGAAGAGTATGAGTATATTGCTGAACCTTCAGCTTGT 4140 ||||||| | ||||||||| ||||| | ||| |||| ||||| || || Sbjct 65286 CGAAGCTATCGGGATGCTGATATTACGAAGTATACATTCATTTCTGAGCCTTCCGCATGC 65227 Query 4141 CATATCTGTGGGGCATTGAATGGTAAAATATTCAAGCTTAAAGATATGTTGCCCGGTATT 4200 | | | ||| | |||||||||| ||| | || | || | | ||| || || | Sbjct 65226 CGTTTATGTTTGCCATTGAATGGGAAAGTGTTTGATGTTGATAAAATGGAACCAGGAACA 65167 Query 4201 AATGCACCAAACATGCATCCGTTCTGTAGATGTAGCACAGCACCGCATGTTAATGATAAA 4260 ||||| | |||||||| || |||||||| || |||||||| | ||| || || Sbjct 65166 AATGCTGCTCCGATGCATCCATTTTGTAGATGCAGTACAGCACCTTACGTTGATCGTATT 65107 Query 4261 GCTTTCTGGGATGAT 4275 ||||| || || ||| Sbjct 65106 GCTTT-TGAGAAGAT 65093 Score = 84.2 bits (92), Expect = 5e-12 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 11189 GTGGAATTGGAGATTGGATTCGGAAGCATAAAGGTCCAATTC-GTGTCGACAGAAAACTT 11247 |||||||||| ||||||||||| | | ||||| || || | || | || ||||||||| Sbjct 56286 GTGGAATTGGTGATTGGATTCGTGAAAACAAAGGACCGATACAGTAT-GATAGAAAACTT 56228 Query 11248 TTAATTCCCGCTGGTAATGCCATTATGAATGGTTTAAA 11285 || ||||| || |||||||| |||||| | |||||||| Sbjct 56227 TTGATTCCGGCGGGTAATGCGATTATGGAAGGTTTAAA 56190 >seq1464 Length=66918 Score = 143 bits (158), Expect = 6e-30 Identities = 222/317 (70%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 26879 AATAACGTCGTATTGGTTGGACGCTTAACTAAAGAACCAGAATTAAAACACACCGGAAAT 26938 |||||||| ||| | |||||||| | || ||||| ||||| ||| | | || || | Sbjct 17860 AATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACATCAAGT 17919 Query 26939 AATATCGCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAAGACGCTAACGGA 26998 | || |||||| | |||| | || || || |||||||| | | ||||| Sbjct 17920 GGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAACGGC 17979 Query 26999 GAGCGTGAAACTGACTTTATTAACTGTGTCATTTGGCGACAACAGGCTGAAAATTTGGCT 27058 | ||||| | || |||||||| ||||| ||||||||| || || |||| | || Sbjct 17980 AACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCA 18039 Query 27059 AATTGGGCTAAAAAAGGCGCATTAATTGGAATCACTGGACGTATTCAGACTCGTAGCTAT 27118 || | || | ||||| | | | || | ||||| |||||||| || ||| ||| Sbjct 18040 AACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTTCTTAT 18099 Query 27119 GAAAATCAACAGGGGCAACGAGTGTATGTGACAGAGGTAGTCGCTGAAAATTTTCAAATG 27178 || |||||||| || ||||| ||||| || ||||| ||||| |||||||| || ||| | Sbjct 18100 GATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTA 18159 Query 27179 CTAGAAAGTCGTGCAGC 27195 | |||||||||||||| Sbjct 18160 TTGGAAAGTCGTGCAGC 18176 >seq3145 Length=45091 Score = 107 bits (118), Expect = 4e-19 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 26962 CCTTGCGGTTAACCGTAACTTTA---AAGACGCTAACGGAGAGCGTGAAACTGACTTTAT 27018 |||||| ||||| || ||||||| | | || ||||||||||||| | ||||| | Sbjct 1883 CCTTGCAGTTAATCGAAACTTTACCAATCAAGC---CGGAGAGCGTGAAGCAGACTTCGT 1939 Query 27019 TAACTGTGTCATTTGGCGACAACAGGCTGAAAATTTGGCTAATTGGGCTAAAAAAGGCGC 27078 | | ||||| |||||| | ||| || |||| ||||||||| ||| | || | Sbjct 1940 TCAATGTGTGATTTGGAGGAAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAAC 1999 Query 27079 ATTAATTGGAATCACTGGACGTATTCAGACTCGTAGCTATGAAAATCAACAGGGGCAACG 27138 || | || | || ||||| ||||| || ||| ||||| ||||| || |||||||| Sbjct 2000 CTTGCTAGGCGTGACCGGACGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACG 2059 Query 27139 AGTGTATGTGACAGAGGTAGTCGCTGAAAATTTTCAAATGCTAGAA 27184 || ||||| || || || || || || ||||||||| || | ||| Sbjct 2060 TGTTTATGTAACGGAAGTTGTAGCAGAGAATTTTCAATTGTTGGAA 2105 >seq14859 Length=68005 Score = 104 bits (114), Expect = 5e-18 Identities = 297/457 (65%), Gaps = 0/457 (0%) Strand=Plus/Plus Query 14188 AAGCTGAAAAGTTCGCATGGCAAGCGTGGGCTACGCTTAGGTCTCTTGGTTATTCAGAAG 14247 |||| ||||| |||||| || ||| | | ||||| | | ||| ||||| ||| Sbjct 43718 AAGCCGAAAAACGAGCATGGAAAATTTGGACGATGCTTAAAGCACGTGGATATTCTGAAT 43777 Query 14248 GTGCATCGGCTGGCATTTTAGGAAATATCAATGGTGAAGTTGGTCCAAGTATGAATCCTG 14307 |||| | || || || || || || || | || ||||| || |||| |||||||||| Sbjct 43778 ATGCAGCCGCAGGTATATTGGGGAACATTCAGGGGGAAGTCGGAGCAAGCATGAATCCTG 43837 Query 14308 ATATTGATCAGGTTGGAGGACCCGCTTATGGCGCTGTGCAGTTTGACGGATCAGCATATC 14367 | | || ||||| || || || || ||||| ||| || | || ||||| || |||| Sbjct 43838 ACACCGAACAGGTGGGTGGGCCAGCCTATGGACTTGTTCAATGGGATGGATCTGCTTATC 43897 Query 14368 CACTTGTAGGAACACGAACAAACAATGGCCGTGAGTATTTCCAAAGACTTGTAAAAGCTG 14427 || | |||||| ||| ||| || || || |||||| | || | | | || | | Sbjct 43898 CATTAGTAGGATCACCAACTTGGAACGGACGAGAGTATGTTCAGCGTTTGATGAATACCG 43957 Query 14428 CTGGTGTCGCTGGAGATTATCGTGAGATGCCTACTCAGATGAAAGTAGTCAACTGGGCTA 14487 | || || | |||||||| || | || | ||| || | | ||| || Sbjct 43958 CAGGGATCCAAGAAGATTATCAAAGTATCGAAGCGCAAGTAAAATTATTAGATTGGTGTA 44017 Query 14488 TGACGTCGGGTCAATGGATTGGTTCAGTTGCGCCAACAACTGTTGACGGATTTAAAGCTA 14547 || |||||||||||||| ||| ||||| || || |||||||| | | Sbjct 44018 TGTTCAATGGTCAATGGATTGGGAAAGTAAATCCAACCACAGTCTCTGGATTTAAGACAA 44077 Query 14548 TGACTGACGCAGCAAGCGCAGCAACTGTTTTCGAAAGAAACTTCGAACGACCAGCAACGA 14607 | | ||| || || |||||| || ||| |||| |||||||| || ||||| | Sbjct 44078 TCAATGATGCCAAGAGTGCAGCATATGCTTTTGAAATGAACTTCGAGCGTCCAGCTTCTG 44137 Query 14608 CACACCCAGAGCGAAGGGGGTATGCCCAAACTTGGTA 14644 |||| ||||| || ||||| ||| ||||||| Sbjct 44138 CACATCCAGAACGGCAAAATTATGCGCAAGCTTGGTA 44174 Score = 93.3 bits (102), Expect = 9e-15 Identities = 123/170 (72%), Gaps = 12/170 (7%) Strand=Plus/Plus Query 26873 ATGGTCAATAACGTCGTATTGGTTGGACGCTTAACTAAAGAACCAGAATTAAAACACACC 26932 ||| | |||||||| ||||| || ||||| |||||||| || ||||| ||| | | || Sbjct 19978 ATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAATACT 20037 Query 26933 ------GGAAATAATATCGCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAA 26986 |||| | ||||| ||| ||| | || ||||| ||||||||||||||| Sbjct 20038 CAACAAGGAACGACGATCGC--TAG----TTTTACACTAGCGGTCAACCGTAACTTTAAA 20091 Query 26987 GACGCTAACGGAGAGCGTGAAACTGACTTTATTAACTGTGTCATTTGGCG 27036 ||| || ||| |||||||| | || |||||||| ||||| |||||| Sbjct 20092 GACCAAAATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCG 20141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104156821025688