Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq11297 616 2e-171 seq95541 95.1 2e-14 seq29470 95.1 2e-14 >seq11297 Length=12984 Score = 616 bits (682), Expect = 2e-171 Identities = 1122/1628 (69%), Gaps = 21/1628 (1%) Strand=Plus/Minus Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821 |||||||| || || | ||||||||||| | | | ||| |||||||| |||| | Sbjct 12755 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 12696 Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881 ||||||| || ||||||| |||| |||| ||| |||||| || || ||||| Sbjct 12695 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 12636 Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941 ||| |||| | || | ||| || || | || ||||||||||| || |||||||||| Sbjct 12635 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGATCTATAAAAGCTCCTC 12576 Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001 ||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | | Sbjct 12575 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 12516 Query 77002 GTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTG 77058 | | || || | |||| ||| | ||| | || || ||| | ||||||| Sbjct 12515 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 12456 Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 ||| || ||||| |||| |||||| | | || ||| | | || |||||| | | Sbjct 12455 GATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 12396 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | |||| ||||||||||||| || ||||| | ||||||||| ||| | |||| Sbjct 12395 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 12336 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | ||||||| |||| || | |||||| |||||||| ||||| |||||||| || | || Sbjct 12335 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 12276 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 ||| | ||| | | ||||||| || || || ||||| || ||| ||||||| Sbjct 12275 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 12216 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | |||| ||| ||||| | ||| || || || || || | || || | || Sbjct 12215 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 12157 Query 77359 CATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 | || |||||| || | |||||| ||||||||| ||||||||| ||||| ||||| Sbjct 12156 CCTTGATATGTACTGTACGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 12097 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 || |||||||||||||| || || | | ||||||| | ||||| ||| || | Sbjct 12096 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 12037 Query 77478 GGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536 | ||| | | | | | ||| |||||||| | |||||||| ||||||||||||||||| Sbjct 12036 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 11978 Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596 ||||||| |||| ||| |||| ||||| || | ||||||| |||||| || |||| ||| Sbjct 11977 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 11918 Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656 || | |||| | || | || | || |||| ||| ||||| |||||| Sbjct 11917 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTT 11858 Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716 || | |||||||||||| | ||||| || || || || || ||||| || |||| | Sbjct 11857 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 11798 Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776 | ||||| | | ||| || || ||||| |||||||| |||||||| ||||||| Sbjct 11797 TGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 11738 Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836 ||| || |||||| | || || | |||||||| | || | || || || || || | Sbjct 11737 TTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCAC 11678 Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TC 77892 || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || || Sbjct 11677 TTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGAC--TTGTTTTATAAATC 11622 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA-TCATCC 77951 | | ||| |||||||| | |||||| ||||||||| ||||| || || ||| | Sbjct 11621 GTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGCG 11563 Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011 | ||||| || |||| || ||||| | ||| | |||| | | |||| |||| Sbjct 11562 AGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 11503 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 ||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| || Sbjct 11502 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 11443 Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 ||||| ||||| || | ||| | || || | ||||| | |||||| || |||| ||| Sbjct 11442 CCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAA 11383 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 ||||| | | || || ||||| || || || ||||||| |||||||||||| || ||| Sbjct 11382 ATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCGGTATTGTTA 11323 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251 || |||||||||||||| | | ||| || || ||||| || |||| || ||| Sbjct 11322 TACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAA 11263 Query 78252 CCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTA 78309 || || | || | | ||| || ||||| || || || ||||| |||| Sbjct 11262 CCCTGAGCTCTGATGCAATGTGTATG--TAAACCTATGCCACCAGCAGATTTAGAAATTA 11205 Query 78310 GAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAA 78369 || || |||| || ||||| | ||||| || || || ||||| |||| | || Sbjct 11204 ATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCATCTTTCATAGCTATAA 11145 Query 78370 GAAAACAG 78377 | |||||| Sbjct 11144 GGAAACAG 11137 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 10640 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 10581 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | ||| ||||| || |||| ||| |||| | || ||| || |||| ||| Sbjct 10580 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 10530 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 78753 TTTTTTGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || || || || |||| ||| |||| |||||||| ||||| | ||| |||||||| Sbjct 9881 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 9822 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 ||||| | ||| || ||| ||||||||||| || |||| | |||| | ||| |||| Sbjct 9821 GGATGATCTGTGGTCTTAGTAGCTGCTATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 9762 Query 78873 GTGACCCCATTATATA 78888 || || ||| ||||| Sbjct 9761 GTTACACCAGAATATA 9746 >seq95541 Length=3042 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | | Sbjct 2738 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 2797 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 |||||||| |||||||||||||| || || || Sbjct 2798 CATATATCTGGATATTGGATTGGGAATATTACGAA 2832 Score = 91.5 bits (100), Expect = 2e-13 Identities = 181/262 (69%), Gaps = 11/262 (4%) Strand=Plus/Plus Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182 ||| | ||||| ||| || |||||| || | | |||| |||| ||| ||| | | Sbjct 1409 AAAAGCTTAAA---TAAGAATACAAAATTACTAAACATACCT-CATCCCTAGAAATAAGT 1464 Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 || || || || | |||||||| || || |||||||| | ||||||||||| || Sbjct 1465 TCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGC- 1523 Query 48243 AAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC--- 48298 |||| | || || || ||||| || || || || ||||| || | | | ||||| Sbjct 1524 AAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCTCCAAA 1583 Query 48299 -GTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357 ||| | | ||| | || |||||| || ||||| || ||||||||||| ||||| | Sbjct 1584 TGTAGCCGTCTT-GCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATG 1642 Query 48358 GCATTGTTTCTATAGCATTAAA 48379 | | ||||| || ||||| || Sbjct 1643 GTAGAGTTTCAATTGCATTGAA 1664 >seq29470 Length=9567 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/370 (66%), Gaps = 9/370 (2%) Strand=Plus/Plus Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026 |||||| ||| || || |||||||| ||| | || | || ||| | | ||| | | Sbjct 3654 TTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 3713 Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086 |||||| |||| ||| |||||| | || ||||||||||||| ||||| || ||||| | Sbjct 3714 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 3773 Query 171087 ATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATA 171146 ||||||| ||| | || | ||| | | | | |||||||| | | || | Sbjct 3774 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 3833 Query 171147 AAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATT---TAAAAAAGCTACCTCTATTA 171203 ||||| | || | || || || | || |||||||| |||| || | || | | Sbjct 3834 AAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACT---TGA 3890 Query 171204 TCTTGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAA 171260 |||||||| | ||| | || | ||||||| ||| || ||| | || || || | Sbjct 3891 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 3950 Query 171261 GTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTG 171320 |||| || |||||| | ||| | ||| ||||| | | || || | | |||| Sbjct 3951 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 4010 Query 171321 ATTGTTTATA 171330 |||| ||||| Sbjct 4011 ATTGCTTATA 4020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693278732997760