Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq11297 598 6e-166 seq95541 86.0 9e-12 >seq11297 Length=12984 Score = 598 bits (662), Expect = 6e-166 Identities = 1118/1627 (69%), Gaps = 19/1627 (1%) Strand=Plus/Minus Query 75357 TTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGAT 75416 |||||||| || || | || |||||||| | | | |||||||||||| |||| | Sbjct 12755 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 12696 Query 75417 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG 75476 ||||||| || ||||||| |||| |||| ||| |||||| || || ||||| Sbjct 12695 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 12636 Query 75477 AATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 75536 ||| | || | || | ||| || || | || ||||||||||| || |||||||||| Sbjct 12635 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGATCTATAAAAGCTCCTC 12576 Query 75537 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 75596 ||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | | Sbjct 12575 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 12516 Query 75597 GTTTGATATCATCTGGAAGATTTGTATTTT---GAATGGATCCGCCATCAGATATAATTG 75653 | | || || | |||| ||| | ||| | || ||||| | ||||||| Sbjct 12515 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 12456 Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713 ||| || || || |||| |||||| | | || ||| | | || |||||| | | Sbjct 12455 GATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 12396 Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773 | || | ||||||||||||| || ||||||| ||||||||| ||| | |||| Sbjct 12395 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 12336 Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833 | | ||||||| |||| || | |||||| ||||| || |||||||||||||| || | || Sbjct 12335 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 12276 Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893 ||| | ||| | | ||||||| || || || ||||| || ||| ||||||| Sbjct 12275 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 12216 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | |||| || ||||| | ||| || || || || || | ||| || | || Sbjct 12215 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 12157 Query 75954 CATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCA 76012 | || |||||| ||| | || || |||||||||| ||| ||||| || ||||| ||| Sbjct 12156 CCTTGATATGTACTGTACGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 12097 Query 76013 CCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAA 76072 || |||||||||||||| || || | | ||| ||| | |||| ||| || || Sbjct 12096 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 12037 Query 76073 GGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCT 76131 | ||| | | | | | ||| |||||||| | |||||||| ||||||||||||||||| Sbjct 12036 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 11978 Query 76132 ATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTT 76191 ||||||| |||| ||| ||| ||||| || | ||| ||| |||||| ||| |||| ||| Sbjct 11977 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 11918 Query 76192 ATTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC 76250 || | |||| ||| || | || | || |||| ||| ||||| |||| | Sbjct 11917 GTTTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGT 11859 Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 || | |||||||| ||||| ||||| || || || || || || || || |||| Sbjct 11858 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 11799 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | | ||||| | | ||| ||||| ||||| ||||| || ||||| |||||||||| Sbjct 11798 CTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTT 11739 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 ||| || |||||| ||||||| | |||||||| | | | || || ||||| || | Sbjct 11738 TTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCA 11679 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--T 76486 || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || | Sbjct 11678 CTTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATAAAT 11623 Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA-TCATC 76545 || || ||| |||||||| | ||||| ||||||||| ||||| || || ||| | Sbjct 11622 CGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGC 11564 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 | |||||||| |||| |||||||| | ||| | |||| | | || | ||| Sbjct 11563 GAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTT 11504 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 |||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| || Sbjct 11503 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 11444 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 ||||| ||||| || | ||| | ||| || | ||||| | |||||| || |||| ||| Sbjct 11443 ACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATA 11384 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 || || | | || || ||||| || || || ||||||| ||||||||| || || || Sbjct 11383 AATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCGGTATTGTT 11324 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 ||| |||||||||||||| | | || || || ||||| || |||| || ||| Sbjct 11323 ATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGA 11264 Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 || || | || | || || ||||| || || || |||||| |||| Sbjct 11263 ACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 11204 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 ||||| |||| || || ||| | || || || || |||||||| |||| | ||| Sbjct 11203 TGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCATCTTTCATAGCTATAAG 11144 Query 76966 AAAACAG 76972 |||||| Sbjct 11143 GAAACAG 11137 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 10640 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 10581 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 | ||| ||||| || |||| ||| | || | || ||||||||| | ||| Sbjct 10580 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 10530 >seq95541 Length=3042 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || |||| ||||||||||| || ||||| || || || || |||||||||||||| | | Sbjct 2738 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 2797 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAA 47210 |||||||| |||||||||| || || || || || Sbjct 2798 CATATATCTGGATATTGGATTGGGAATATTACGAA 2832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711507782618880