Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031040.1 Length=31987 Score E Sequences producing significant alignments: (Bits) Value seq28223 150 4e-32 seq7607 80.6 5e-11 >seq28223 Length=7146 Score = 150 bits (166), Expect = 4e-32 Identities = 309/454 (68%), Gaps = 18/454 (4%) Strand=Plus/Plus Query 6992 TGGCAGATAACAAGAAGTATTACTACATGAGATTAAAAGAAAACTTCTTTGATTCTGATG 7051 |||| ||||||||| || ||||| | | | ||||||| || || |||||| ||| | Sbjct 188 TGGCTGATAACAAGCGATACTACTATTTAAAACTAAAAGAGAATTTTTTTGATAGTGACG 247 Query 7052 AAATGATTATCTTAGAAAACATGGATAACGGAGATGGGATTATTTACAGTAACATCTTAC 7111 |||||||| | | |||| ||| |||||| ||| || |||||| | | Sbjct 248 AAATGATTCTTCTTGAAAGTATGCC------AGATGGCTATATATATTCTAACATTCTCC 301 Query 7112 TGAAGCTTTATCTAAGAAGTTTAAAGTATGAAGGACGGTTAATGTTCAATGAAAGAATAC 7171 | || || ||| || ||||| | ||| ||||||| ||| ||||| ||||| ||||| | Sbjct 302 TCAAACTCTATTTACGAAGTCTGAAGCATGAAGGCAAGTTGATGTTTAATGACAGAATTC 361 Query 7172 CTTTCAACCCTCAAATGCTTTCTACTATTGTACGTCATCCAGTCGGTGTAGTTGAAAAAG 7231 | || || || ||||| | ||||| | | ||| | || ||||| || ||||||| Sbjct 362 CATTTAATTCTACTATGCTCGCAACTATCACAAGGCATTCTGTAGGTGTTGTAGAAAAAG 421 Query 7232 CTCTTAAAGCGTTTGTTGATTTAGGCCTAGTTGAAGTTATGGATAATGGAGCAATTTATA 7291 | || || || |||||| || |||| || | ||||| |||||||| || | Sbjct 422 CGGTTCAAATTTTCTGTGATTTGCAACTTATTGATGTATTAGATAACGGAGCAATCTACA 481 Query 7292 TGCTAGATATTCAAAACTTTATCGGAAAAACAACAACAGAGGCTGATAGGATAAAGGCTT 7351 || ||||||||||| ||||| || || | ||||||| || ||||| | || | || Sbjct 482 TGTCAGATATTCAAAGTTTTATTGGGAAGTCCTCAACAGAAGCAGATAGAAAAAGAGATT 541 Query 7352 ATCGTTCTAAAAT-TAATAAAGAAAAAGGTCTAGTTTCAAATGATA----CACAAAAGTT 7406 || | ||||| || || ||||| | | ||| ||| | | ||||| | | Sbjct 542 ATAGAAAGAAAATAGAAGAAGCAAAAAAG---AATTT--AATAACAGGAGGACAAATG-T 595 Query 7407 AGTACAAATGTAC-GACAAAAGTACACCAGAGTT 7439 | |||||||| | ||||||| |||||||||||| Sbjct 596 CGGACAAATGTCCGGACAAAACTACACCAGAGTT 629 >seq7607 Length=81728 Score = 80.6 bits (88), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 24241 TTTGTAGGTGGAATTGCTGATTGGATTAAAGAACATAAAGGACCAATTAGTTATGATAGA 24300 ||||| |||||||||| |||||||||| ||| | |||||||| || ||||||||| Sbjct 56293 TTTGTCGGTGGAATTGGTGATTGGATTCGTGAAAACAAAGGACCGATACAGTATGATAGA 56234 Query 24301 AAACTACTAATTCCAGCTGGTGAAGCTATTATGGGTGGATTTAA 24344 ||||| | ||||| || ||| | || ||||||| || ||||| Sbjct 56233 AAACTTTTGATTCCGGCGGGTAATGCGATTATGGAAGG-TTTAA 56191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102042448098792