Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031042.1 Length=111325 Score E Sequences producing significant alignments: (Bits) Value seq1361 87.8 1e-12 >seq1361 Length=62553 Score = 87.8 bits (96), Expect = 1e-12 Identities = 224/335 (67%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 22676 GAGTATGAGACTAATTCGTTATTTAACTCTAATGGGCAGACTCCTTTTGTTACTCTGGGC 22735 || ||||||| ||| | | || | || || || || || |||||| | | || ||| Sbjct 32537 GAATATGAGATCAATACACTTTTCACTTCCAACGGACAAACGCCTTTTACTTCACTCGGC 32596 Query 22736 TTTGGTTTAGGACAAGAATGGGAAGAAAGGATGATTCAGAAAGCTATTCTTCAAAATCGT 22795 || ||| |||| || | ||| ||| | || || ||||| ||| | |||| || Sbjct 32597 TTCGGTCTAGGTAAAAATTGGTTTGAACGAGAAATCCAAAAAGCGATTTTACAAATCCGA 32656 Query 22796 CTTAAAGGACTAGGGGCAGC-AGGGTCG-ACACCTATCTTTCCTAAATTGATATTTTCAG 22853 | || ||| |||| ||| || || ||| | ||||| || |||||||||||| || Sbjct 32657 ATCAATGGATTAGG--CAGTGAGAAACGGACAGCGATCTTCCCAAAATTGATATTTACAC 32714 Query 22854 TTAAGGAGGGGTTAAACAAAAATCCTGGTGATCCTAATTATGATATAAAACAGCTAGCAC 22913 | || || || | || || || |||||| || ||||| || ||||| |||| Sbjct 32715 TAAAAGACGGAATCAATCTTAAACCAACTGATCCAAACTATGACATCAAACAATTAGCCT 32774 Query 22914 TAGAATGTTCTGCTACACGTATGTACCCAGACTATT-TAAGCTATGAGAAGGTTGTAGCT 22972 |||||||| | | | | | ||||||||||| |||| ||| ||||| ||| | || | Sbjct 32775 TAGAATGTGCCACAAAAAGAATGTACCCAGA-TATTCTAAATTATGACAAGATCGTTGAA 32833 Query 22973 GTTACTGGCGATTTTAAAGCCCCTATGGGTTGTCG 23007 | || || || |||| || ||||| ||||| Sbjct 32834 TTGACAGGAAGCTTCAAAGTACCAATGGGCTGTCG 32868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355420410787064