Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq1361 118 1e-21 >seq1361 Length=62553 Score = 118 bits (130), Expect = 1e-21 Identities = 421/647 (65%), Gaps = 36/647 (6%) Strand=Plus/Plus Query 155948 GGTGATATCCATTATCATGATCTGGATTACAGCCCGTTCACGCCATACACAAACTGCTGT 156007 || |||||||||||||||||||| |||||| |||| || ||| ||||| |||||| Sbjct 32177 GGCGATATCCATTATCATGATCTCGATTACCATCCGTATACACCAATGACAAATTGCTGT 32236 Query 156008 CTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAA 156067 || | || || ||||||||| || || || || || || || || ||||| ||||| Sbjct 32237 TTGATCGACTTCAAAGGTATGTTGAACAACGGGTTTAAAATTGGAAATGCAGAAGTCGAA 32296 Query 156068 CCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCT 156127 | || ||||| ||| || || || | || ||||||||| || | |||| Sbjct 32297 TCACCAAAATCGATCCAAACAGCAACGGCACAGATTTCACAGATCATTGCCAATGTTGCA 32356 Query 156128 TCTCACCAGTACGGCGGGACAACCTTTGCAAA---CGTGGATAAAGTGCTGGCTCCGTAT 156184 ||| ||| || ||||| | | ||| | | ||| || |||| ||||| | | Sbjct 32357 TCTAGCCAATATGGCGG---ATGTTCTGCCGATCGCACAGATGAATTGCTTGCTCCTTTT 32413 Query 156185 GCAGAAATGACATATGAAAAGCATGTTAAGGATGCTAA--AAAGTAT--AAAATTTCGTT 156240 ||| || | | || |||| ||| | | ||||| || || | || | | || Sbjct 32414 GCACAATTAAATTACAAAAAACATTTAATTGATGCCAAAGAATGGATCGACACACCCGAA 32473 Query 156241 AG--ATCGTACATATGCGATGGAAAAGACTGAAAAAGATGTGTTTGATGCTTTCCAATCG 156298 | | | ||||| | | ||| || |||||||| | |||||||| | ||| Sbjct 32474 CGGCAAGAAGCCTATGCAAAAGCAAAAACCAAAAAAGATATTTTTGATGCCATGCAAAGT 32533 Query 156299 TATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTATT 156358 | ||||| || | || || || ||| ||||||||||||| |||| ||||| | Sbjct 32534 TTGGAATATGAGATCAATACACTTTTCACTTCCAACGGACAAACGCCTT---TTACT-TC 32589 Query 156359 ACT----TTCGGTACTGGTACGGGAAT--GTTTGAACGAATGATCCAGAAAGCGATTCTG 156412 ||| |||||| |||| ||| |||||||||| ||||| ||||||||| | Sbjct 32590 ACTCGGCTTCGGTCTAGGTA--AAAATTGGTTTGAACGAGAAATCCAAAAAGCGATTTTA 32647 Query 156413 AAAAACCGTATTCGTGGTCTGG---GTAAACAAGGTATTACCCCTGTGTTCCCTAAACTG 156469 ||| ||| || ||| | | || | || | || | | ||||| ||| || Sbjct 32648 CAAATCCGAATCAATGGATTAGGCAGTGAGAAACG---GACAGCGATCTTCCCAAAATTG 32704 Query 156470 GTCATGTTTATGGAAAAAGGTGTAAACA---TGAATCCTGGGGATCGTAACTATGACATC 156526 || |||| ||||| | || || | || || |||| |||||||||||| Sbjct 32705 ---ATATTTACACTAAAAGACGGAATCAATCTTAAACCAACTGATCCAAACTATGACATC 32761 Query 156527 AAACAATTGGCTCTGGAATGCGCTTCGAAACGTATGTACCCAGATAT 156573 |||||||| || | ||||| || | ||| | |||||||||||||| Sbjct 32762 AAACAATTAGCCTTAGAATGTGCCACAAAAAGAATGTACCCAGATAT 32808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575419048998560