Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031069.1 Length=32729 Score E Sequences producing significant alignments: (Bits) Value seq7607 884 0.0 seq1464 138 2e-28 seq1539 116 8e-22 seq14859 98.7 2e-16 seq3145 96.9 7e-16 seq28223 89.7 1e-13 >seq7607 Length=81728 Score = 884 bits (980), Expect = 0.0 Identities = 1026/1378 (74%), Gaps = 4/1378 (0%) Strand=Plus/Minus Query 554 GAAGAAGAGCTTAGAAAGTTGGCGAGTCGTGATGGATAAAATAGCGCTAGGGGCAAAAAT 613 |||||||| | | ||||||||||||||||||||||||||| || |||| || ||| | Sbjct 69724 GAAGAAGAATTGCGGAAGTTGGCGAGTCGTGATGGATAAAATTGCTTTAGGCGCCAAACT 69665 Query 614 TGAGCTGTCTAAGCGCTTTTTCTTTGATTACTGTAATCTCATCATGCCAAGCTTTTTTAA 673 |||| | | || || | ||| |||||||| || | | || |||||| |||| ||| Sbjct 69664 TGAGTTAGCAAAACGATATTTTTTTGATTATTGCCACTTGATTATGCCATCGTTTTATAA 69605 Query 674 ACGAGATAGAGCTTATCTGGTGACAATGTGTGAAGAGTTTCAGTCATTTCTAAATGATGA 733 | ||| |||| ||| || || | || |||| ||||||||||||||| || ||||| | Sbjct 69604 GCCAGACAGAGATTACCTTGTTTCTATATGTGGAGAGTTTCAGTCATTCCTTAATGACAA 69545 Query 734 TGAACATGATGTTTTAGTTCTGAATCTTCCGCCGAGACATGGAAAGTCTCTCACGCTCGG 793 |||||| ||||| | || || ||| | ||||| |||||||| ||||| | || || || Sbjct 69544 TGAACACGATGTGCTTGTGCTTAATATGCCGCCTAGACATGGTAAGTCCTTAACACTTGG 69485 Query 794 TAAGTTTGTAGAGTGGGTGCTTGGTAATGACCACACGAAGAAAATCATGACTGGTTCATA 853 |||||| || ||| | | || ||||| || | |||||||| |||||||| ||||| Sbjct 69484 ACGGTTTGTCGAATGGATATTAGGGAATGATCATAGCAAGAAAATTATGACTGGATCATA 69425 Query 854 TAACGAAATTCTATCAACAGTTTTCTCTAAAAATGTTCGTAACACTATTCAACAAAATAA 913 |||||| | ||||| || || || || || ||||| | ||||| || ||| || || Sbjct 69424 TAACGAGACACTATCGACCGTATTTTCCAAGAATGTGAGAAACACAATCCAAGAAGTAAA 69365 Query 914 AGCGGATGTGGATAAGATTGTTTACTCCGATATTTTTGATTCCAAGATTAAAGACGGAGA 973 ||| ||| |||| ||| || |||||||||||||||||| | ||||| ||| | || || Sbjct 69364 AGCCGATAAAGATATGATAGTCTACTCCGATATTTTTGATGCGAAGATAAAATATGGTGA 69305 Query 974 TGCTGCGAAAAACCTCTGGAGCTTATCAGACGGTTATAACAACTATTTGGCAACCTCTCC 1033 || || | || || ||||| || ||| || ||||| ||||| |||| || || || Sbjct 69304 TGGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTATAATAACTACCTGGCCACATCGCC 69245 Query 1034 AACAGGGACTGCAACAGGTTTTGGTGCTGACATTATTATCATTGATGATGTTATCAAGAA 1093 ||| || || || || ||||||||||| ||||| |||||||||||||| || |||||||| Sbjct 69244 AACTGGTACAGCTACTGGTTTTGGTGCAGACATAATTATCATTGATGACGTAATCAAGAA 69185 Query 1094 TGCTGAGGAAGCTAACAACGCGACAATATTAGAAAAACATTGGGACTGGTTTGTTAATAC 1153 || || ||||| |||||||| || | || || ||||||||||| |||||||| ||||| Sbjct 69184 CGCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAACATTGGGAATGGTTTGTAAATAC 69125 Query 1154 CATGCTTTCACGTTTGGA-ATCAAGCGGTAAAATCATAATTAACATGACTCGTTGGCATA 1212 ||||| || ||| | || | ||| |||||| ||||| || ||||||||| | ||||||| Sbjct 69124 TATGCTATCCCGTCTTGAGAGCAA-CGGTAAGATCATTATCAACATGACTAGATGGCATA 69066 Query 1213 GTGAAGATTTAGCCGGACGTGCTTTGCGTGAATTGCCTAAAAATGGCTATCGAGTAAAGC 1272 | | ||||| || || | || || |||||||| | || ||| || |||| Sbjct 69065 GCAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCCACTTAGCGGGTATAAGGTTAAGC 69006 Query 1273 ATATTAA-TTTCAAGGCTTTCAACGAGCAAACGAATGAAATGCTTTGTGATGATATTCTG 1331 ||||||| ||||||| | | | | ||||| || |||||||| || ||| |||| Sbjct 69005 ATATTAACTTTCAAGCGTATGATGAAAAAAACG-ATCGGATGCTTTGCGAAGATGTTCTT 68947 Query 1332 ACTCTTGAAGATTATAAGCGCAAAGTAAAAACAATGGGGGCTGATATTGCCAGCGCCAAC 1391 || ||| ||||| ||| |||| ||||| ||||| || || || || ||||||||| Sbjct 68946 TCTTATGAGGATTACCTGCGTAAAGCTAAAACGATGGGTGCGGACATCGCTAGCGCCAAC 68887 Query 1392 TACCAACAAGAGCCGATTGATGTCAAAGGTCGATTATATAGTGAGTTCAAGACTTACAAT 1451 |||||||||||||| || || | ||||| |||| || |||||||||||||||| | Sbjct 68886 TACCAACAAGAGCCTATCGACATTAAAGGGAGATTGTACGGTGAGTTCAAGACTTATAGC 68827 Query 1452 GCTCGTTCGGAGTACAAAAAGATTTGGAACTATTGCGATACCGCAGACACTGGGAAAGAC 1511 | | || | || || ||||||||| | ||||||||||| || || ||||| || ||| Sbjct 68826 AATAGATCCGCCTATAAGAAGATTTGGCATTATTGCGATACTGCCGATACTGGTAAGGAC 68767 Query 1512 TATCTCTGTTCGATTGTGTGGGGTGAAACCTCAGACGGCTTTGCGGATGTGCTAGACATT 1571 || || |||||||| || ||||| ||||| ||| |||| | ||| || ||||| | Sbjct 68766 TACCTTTGTTCGATCGTTTGGGGAGAAACGCTAGATGGCTATCAGGACGTTTTAGACGTC 68707 Query 1572 ATTTACACTCAAAAGCCGATGGAGTACACAGAAAACGCAGTGGCCAATCAATTAATTAAT 1631 || || |||||| |||| ||||| |||||||| | ||||| || ||||| || ||||| Sbjct 68706 ATCTATACTCAACAGCCAATGGAATACACAGAGAGTGCAGTTGCAAATCAGTTGATTAAC 68647 Query 1632 AACAGAGTGAATGTGTCAAGAATCGAGCGAAATAATGGCGGTCGGTCTTTTGCTCGTTCT 1691 || ||||||| || | |||||||| || || |||||||||||||||||||||||| Sbjct 68646 TTCAAAGTGAATACATCGCGTATCGAGCGCAACAACGGCGGTCGGTCTTTTGCTCGTTCT 68587 Query 1692 GTCAGGGATAAGATTCAAGGCAAAGTGGCTTGTGTTGTAGAAGATTTCTTCCAAGGGAAT 1751 || || || || | |||| ||| || |||| | || ||||| ||| | | Sbjct 68586 GTAAGAGAGAAAGTAAAAGGAAAATGTGCAACTGTTATTTCCGACTTCTTTCAAAGCACC 68527 Query 1752 AATAAAGAAGCCCGAATTTATTCCAATAGTTATTGGATAGAGCAGCACGTTCGATTTCCT 1811 ||||||||||| |||| |||||||||||| | ||||| || || | || ||| | ||| Sbjct 68526 AATAAAGAAGCGAGAATCTATTCCAATAGTCACTGGATTGAACAATATGTACGAATGCCT 68467 Query 1812 AATGACTGGCGAACTCGTTTTCCAGAATACTATCAAGCAATGACGACTTATCAACGTGAA 1871 | ||||||| |||| | ||||| || |||||| | || ||||| |||||||| ||| Sbjct 68466 AGTGACTGGAGAACAAGATTTCCTGATTACTATAAGGCGATGACTACTTATCAGAAAGAA 68407 Query 1872 GGTAAAAATAAACACGATGATGCGCCCGATGCAACAACTGGGATCGCTGAGACAATGA 1929 || || || ||||| |||||||| || ||||||||||| || ||||| || ||||||| Sbjct 68406 GGAAAGAACAAACATGATGATGCTCCAGATGCAACAACAGGCATCGCCGAAACAATGA 68349 Score = 233 bits (258), Expect = 4e-57 Identities = 444/650 (68%), Gaps = 18/650 (3%) Strand=Plus/Minus Query 8170 GCCTTTATTTTTTA-AGGAGAAATCAAAATGGAATTAACGATTAATGAAAAACAGTATGT 8228 || ||||||||| |||| ||| |||||||||||| |||||| || ||| ||||| Sbjct 59601 GCTTTTATTTTTAGGAGGATGAAT--AAATGGAATTAATGATTAACGACAAAGAGTATAG 59544 Query 8229 TTTTATCTTCGGTTACCGATTCATTAAGGAATTGAATaaaaaaaaTGAAGTAACAGAACG 8288 ||||| || || | | || || ||| |||| | | || || ||||| Sbjct 59543 CTTTATTTTTGGATTTGGGTTTATCCGTGAAATGAACCGCAGATATTCCGTTGTAGAACA 59484 Query 8289 TGGGATGACTTTAAAAGTCGGTTTAGATAATGCTTTGATGAACTTCTTTAGTGGAGATAT 8348 || ||||| | ||| | || || ||| | | |||| ||||||| | ||| || Sbjct 59483 AGGAATGACAATGAAACTGGGCTTGGATTCAACACTCGTGAATTTCTTTAACGAAGAAAT 59424 Query 8349 CGAAACACTTGTTGAAATGTTAAAAATTGCCAATGCAACAGAAAATCCTCGTGTCTCTGA 8408 |||||| | |||||||||||||| | || || |||||||| || || || |||| Sbjct 59423 TGAAACATTGATTGAAATGTTAAAAGTAGCAAACGCAACAGAGTCACCACGAGTTGCTGA 59364 Query 8409 GAAAGGGATAGTTGAATGGATTGAAGAAAATGGAGCTGATGCGCTTTTTGATTTAGTACT 8468 |||| | ||| | | |||| |||| ||| | ||| || ||| |||| ||| | Sbjct 59363 AAAAGATTTGATTGCCTTGGTTGATGAAATTGGCTCGGATAAACTCTTTAATTTGGTATT 59304 Query 8469 CGAAGAGTTAAAAAAGTCGGAATTTACCAAGaaaaaaaCGTTGAACTTCGAGAAAGAAGT 8528 ||||| |||||||||||||||||||| ||||||||||| | || |||| || || | Sbjct 59303 GGAAGAATTAAAAAAGTCGGAATTTACAAAGAAAAAAACACTAAAGATCGAAAACAAAAT 59244 Query 8529 CAGCAAAAATCTACAGTAACAGATTTTGACA-AACTCTATGAACAAGTTCAGTTAAATTG 8587 || || | | || | ||||||| ||| |||| || || ||||||| Sbjct 59243 CAAAAACAGCAAATAGAAGAAGATTTTTACACAACT----------GTCCAAATAAATTG 59194 Query 8588 TTTGCGTTATCTCGGAATTACTAATCTAAGAGATATAGAGCGCATGACCATTTCGGAGTA 8647 | |||||||||| || ||| || | | |||||| || || ||||| || ||| || Sbjct 59193 TCTGCGTTATCTAGGGATTTCTGACTTTCTAGATATCGACCGAATGACAATGCTGGAATA 59134 Query 8648 TGAATTAAGGCTGAAAGCTTATAGGCTAAAAAGACTTGATGAGCAAGAATCTATTTACCA 8707 |||| |||| | | || ||| | || || || | ||||| ||||| ||| | | Sbjct 59133 TGAAACAAGGATTATTGCCTATCGTCTTAAGAGGTTAGATGAACAAGAGCTTATACATTA 59074 Query 8708 ACAAGCATGGGCAAATTGGCAAGTTCAATCAACTAAACAACAAGGTAAGAAGCAAGTTCC 8767 ||||||||||| ||| ||||||| || | |||||| ||| ||||| | | ||||| Sbjct 59073 CCAAGCATGGGCGAATAGGCAAGTCAAAGCTACTAAAAAACGTGGTAAATACGAGGTTCC 59014 Query 8768 AGTTTATTCG--ACCTTCAAGAAGTTTTTTGATAAAGAAAAATTTGAAAA 8815 |||||| | |||||| | || || ||| | ||||||||| ||||||| Sbjct 59013 --TTTATTTGATACCTTCGAAAAATTCTTTAACAAAGAAAAACTTGAAAA 58966 Score = 217 bits (240), Expect = 3e-52 Identities = 439/642 (68%), Gaps = 12/642 (2%) Strand=Plus/Minus Query 13088 GGTGAAGAAGTTGGGGACGGTTATGGGCGAAGACTTGAATTTTCAGATGTTGAATGGAAA 13147 ||||||||||| || || |||||||| |||||| | |||||| | || | ||||||||| Sbjct 54458 GGTGAAGAAGTCGGCGATGGTTATGGTCGAAGAATCGAATTTGCGGACATAGAATGGAAA 54399 Query 13148 AAGTCTAATGGTAAACCACTTGATAAGCCAAAAGGCCAAAATTGGATTGAATATCCAGAA 13207 || || ||||| ||| | || || || ||| |||||||| ||||| |||| ||| Sbjct 54398 AAATCAAATGGCGCACCTTTAGACAAACCGTTAGGAGAAAATTGGCTTGAAGATCCGGAA 54339 Query 13208 ATGACAGAAGAATACGGCATTCCG---TCAAATGGAAAAATGCTTCCTCGGAAAACAGTG 13264 |||| | ||| || |||||| | ||||||| |||| || ||||||| Sbjct 54338 GCAACAGCAAAATTTGGTATTCCGCAACCTAATGGAACAATGAGGAAACGAGAAACAGTT 54279 Query 13265 GTTGTCTTTGATGATGTGGAAGATGCAGACGAGCTTTTACAAAAGACTTATGAAAAACTG 13324 || | || |||||| | |||||| || ||||| |||||||| |||||||| | | || Sbjct 54278 GTGATTTTCGATGATATTGAAGATCCAACAGAGCTATTACAAAAAACTTATGAGACATTG 54219 Query 13325 GCTTATTACTGCC-GGCCACTCGTTCAGTTTAGTACTGAGATATTAGGCAGTGACTCAAT 13383 | | | || || | || | | ||||||| ||||| | ||| ||||| || Sbjct 54218 G-TGGGTGCTTCCAGACCTTTAGCACAGTTTAAAGCTGAGGTGACAGGGAGTGATGTCAT 54160 Query 13384 TGGAAATACTGTTTCAATTCACAGAGGAGACCGAAATTATCACTATCAGACAAGAGTCTT 13443 ||||||||| || ||||||| ||| || || ||||||||||||| || ||| |||| Sbjct 54159 TGGAAATACAGTGACAATTCATAGACATGATCGTAATTATCACTATCGTACTAGAATCTT 54100 Query 13444 TAAAGTGGTTACTGACCATGTTAATGGAC-GAGTGCAAGCTAGTTTAGGTGATAATTTAA 13502 |||||| | | ||| | | | ||| | || ||| | || || ||||| ||||||| Sbjct 54099 CAAAGTGAGAATTAACCGTTTAACTGGCCAGACCTCAATCGAG-TTGGGTGACAATTTAA 54041 Query 13503 GTGGCAACTCT-CTCAATCGTCAGTTATCGAAGATTCAAAGTAATATCTCAGACCTTGAT 13561 ||| | | | | | || | | || | ||| | || ||| || | || || Sbjct 54040 ---CCAAAGATGCACGA-AGACAATCAGCGCAAATTTCGAATAGTATTTCTAATCTGGAA 53985 Query 13562 AATAATAAAATGACTTTCTTTGAATCAACTGAAATCGGAAAGTATCAAGATGATATTATG 13621 ||||| |||||||||| |||||||| |||||||| || | |||||||| || ||| Sbjct 53984 TCAAATAAGATGACTTTCTACGAATCAACCGAAATCGGTAAATTCCAAGATGACATCATG 53925 Query 13622 CGTGGTGCTGGTGCCAATGGTGGGTCAATTTATATGGTCAATGGGATTGAAGCGGGCGTT 13681 ||||| || || |||||||| || || | || | ||||| ||| | || || Sbjct 53924 CGTGGCGCAGGGAAAAATGGTGGTTCGATCCTTTTGATGAATGGTCAAGAAACTGGTATT 53865 Query 13682 TCTCAATCAAGAGAAACTTATGAGCAAGTCTTTATGGATGGT 13723 ||| | ||||| | ||| || || |||||| ||||| Sbjct 53864 TCTGACGGCAGAGAGCCCTATCAGATGGTTTTTATGAATGGT 53823 Score = 183 bits (202), Expect = 6e-42 Identities = 596/915 (65%), Gaps = 13/915 (1%) Strand=Plus/Minus Query 3342 AAACGTGAGAAAGCTTGGCAAGAGCAACAAATCAAAGATGACACCAAACGCATGAAACAA 3401 ||||||||||||||||||||| ||||||| || |||||||| | ||||||||||| | Sbjct 66000 AAACGTGAGAAAGCTTGGCAACAGCAACAGATTAAAGATGATAAGAAACGCATGAACGAG 65941 Query 3402 ATCATGGATAAGCTATTTGAA---GCTCAAGAAGCCATTCAAAAAGAAATCAATGCCAAC 3458 |||| || ||| | || || ||||| || || || ||||| || | || | Sbjct 65940 ATCA---ATCAGCGTCTGCAATATGCACAAGATGCGATACAGAAAGAGATAGACGCACAG 65884 Query 3459 TGGCAGAACTTTGCGAATGGTCAAGGAATTTCTATCAGTGAAGCCATGAAACGTGCGGAT 3518 ||| | | ||| | ||||| || ||| || || ||||| ||||| || || | Sbjct 65883 TGGGACAGTTTTTCCAATGGACAGAAAATCACTCGTAGCGAAGCGATGAAGCGAGCTAAC 65824 Query 3519 AAAATGGATGTCAAAGCATTTGAAAATAAAGCCAAAAAGTATGTTAAAGAAAAAGACTTT 3578 |||||||||| |||||||||| || || || ||||||||||||||||||||||| Sbjct 65823 GAAATGGATGTAAAAGCATTTGCTCGCAAGGCTAAGAAGTATGTTAAAGAAAAAGACTTC 65764 Query 3579 TCGAACCAAGCAAATCAAGCGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTA 3638 || |||||| | | || || || || || | || ||| | || ||||| || Sbjct 65763 TCTCCGACAGCAAACAAGGAATTAAAGCTATACAATCTTACGATGCGTGTTAATCGATTG 65704 Query 3639 GAACTTCTGAAAGCAAATATTGGTCTGGAGCTTATTTCAGTATTTGATGACTTGGACAAA 3698 ||| | || || || ||||| || || || || ||| | | || | || |||| || Sbjct 65703 GAATTACTAAAGGCGAATATCGGACTTGAACTGATTGCTATGTTCAACGATATGGATAAG 65644 Query 3699 TATTTCTCA-AAGAATTTGACTGGTGCAGCTCTTACAGAATTTGAAAGACAAGCGGGAAT 3757 ||||||||| ||| || ||| | || | | | |||||| || | ||||| || | Sbjct 65643 TATTTCTCAGGAGAGCTT-ACTAGCGCTGGCTTGAAAGAATTGCAACGTCAAGCAGGCA- 65586 Query 3758 TCTTGGTTTAAGCGTTC-CAAAGAAAGGCTATAACAGTCTAGTTGAATCAGTTCTTAACG 3816 |||| | || || | || | || ||| || ||||| || ||| | || Sbjct 65585 TCTTAGAAATGACGATCGCTAAAAGTGGTTATGCCAAGCTAGTGGAGCAAGTAATCAATA 65526 Query 3817 GAAGTTATAAGGTCGAAGGATTTGCCAGTTTTTCTGACAAGCTTTGGCAGTACCAATTTG 3876 | | | | || || || || | ||| || ||||||| ||||||| | Sbjct 65525 GTTCGTTTCGAGCGGATGGTTTCGCAACGTTTAGCGAACGGCTTTGGATGTACCAAGCAG 65466 Query 3877 AATTGAAAGCTGATATTGAAAAACTTCTCATTCGTTCAGTAACTGGTGGAATCAACCCGA 3936 | |||||||||||| | || || | || | ||| || ||| ||| || || | Sbjct 65465 AGTTGAAAGCTGATCTGGATAAGTTGCTGGTACGTAGTGTGACTTTAGGACGTAATCCCA 65406 Query 3937 AAGCACTAG-CCCCACAACTAAAAAGGCTGATGACTGAACAAGGAAGAATGAATGCCACA 3995 || || | | | | || ||| |||| | | || ||| |||| ||| |||| | Sbjct 65405 AA-CAGTTGTCATCTGAATTAAGAAGGTTCCTTACCGAAAAAGGCAGAGAGAATACTCGT 65347 Query 3996 TACAACGCACAACGATTACTAGTAACAGAAACAACACGAGTTCAAACAGCTATTCAAGAA 4055 | ||| | | || || | || |||||||| || | ||||| | | ||| ||||| Sbjct 65346 TTCAATACGGAGCGGTTGATGGTCACAGAAACGACTAGGGTTCAGATTGGTATCCAAGAG 65287 Query 4056 GAGAGCTATAAAAAAGCTGATATTGAAGAGTATGAGTATATTGCTGAACCTTCAGCTTGT 4115 |||||| | ||||||||| ||||| | ||| |||| ||||| || || Sbjct 65286 CGAAGCTATCGGGATGCTGATATTACGAAGTATACATTCATTTCTGAGCCTTCCGCATGC 65227 Query 4116 CATATCTGTGGGGCATTGAATGGTAAAATATTCAAGCTTAAAGATATGTTGCCCGGTATT 4175 | | | ||| | |||||||||| ||| | || | || | | ||| || || | Sbjct 65226 CGTTTATGTTTGCCATTGAATGGGAAAGTGTTTGATGTTGATAAAATGGAACCAGGAACA 65167 Query 4176 AATGCACCAAACATGCATCCGTTCTGTAGATGTAGCACAGCACCGCATGTTAATGATAAA 4235 ||||| | |||||||| || |||||||| || |||||||| | ||| || || Sbjct 65166 AATGCTGCTCCGATGCATCCATTTTGTAGATGCAGTACAGCACCTTACGTTGATCGTATT 65107 Query 4236 GCTTTCTGGGATGAT 4250 ||||| || || ||| Sbjct 65106 GCTTT-TGAGAAGAT 65093 Score = 98.7 bits (108), Expect = 2e-16 Identities = 219/329 (67%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 9244 ACTCGCTTGGTGCAGCGATTGGTCGTTTTGATACTTTGAATAAGTATCCTGTTGTAATGA 9303 |||| | || | ||| |||| |||||| ||||| ||||| |||| || ||||| Sbjct 58710 ACTCATTAGGCGGAGCCATTGATCGTTTCGATACATTGAAACAGTACCCAAACATAATGC 58651 Query 9304 AGGCGCTTGGTTATTCTGCTTCTGATGTTGATAAATCAATGGCAAAACTGAATAAAGGAA 9363 | || || ||||| || || || || |||||||| | ||| | | | |||||| Sbjct 58650 GGCAACTGGGATATTCAACTGACGAAGTAGACCAATCAATGACTAAATTAACTGAAGGAA 58591 Query 9364 TTGATGGCTTACCTACCTCTCTTGATGAAATTGTAACCAATACTCAACAACTTGCTATAT 9423 | || || || || || | | || || ||||||| ||| | ||| | | || Sbjct 58590 TCGACGGTTTGCCAACTACGTTAGACGATATTGTAAAAAATGCACAAAGTTTAACGATGA 58531 Query 9424 CTACAGGAAGCTTAACAAAAGGAACTGATATAGCTATTGCATTAAACAATGCTTTTCTAG 9483 | || ||| ||| ||||| || || ||| || || ||||||||||| || | | Sbjct 58530 CCACTGGAGATTTAGACAAAGGGACAGAATCAGCAATCGCTTTAAACAATGCGTTCTTGG 58471 Query 9484 CTTCTGGTGCTTCAACTGCAGATGCAAGCCGAGGAATGCAACAATATGTTCAAATGTTAT 9543 | |||||| |||||||||||||| |||| | |||||| || ||||| Sbjct 58470 CCAGTGGTGCAAGTTCTGCAGATGCAAGCAGAGGGCTAACTCAATATACCCAGATGTTGG 58411 Query 9544 CTAAGGGAACTGTTGATATGCAATCGTGG 9572 ||||||| | ||||| |||||||| ||| Sbjct 58410 CTAAGGGCAAGGTTGACATGCAATCATGG 58382 Score = 84.2 bits (92), Expect = 5e-12 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 11287 GTGGAATTGGAGATTGGATTCGGAAGCATAAAGGTCCAATTC-GTGTCGACAGAAAACTT 11345 |||||||||| ||||||||||| | | ||||| || || | || | || ||||||||| Sbjct 56286 GTGGAATTGGTGATTGGATTCGTGAAAACAAAGGACCGATACAGTAT-GATAGAAAACTT 56228 Query 11346 TTAATTCCCGCTGGTAATGCCATTATGAATGGTTTAAA 11383 || ||||| || |||||||| |||||| | |||||||| Sbjct 56227 TTGATTCCGGCGGGTAATGCGATTATGGAAGGTTTAAA 56190 >seq1464 Length=66918 Score = 138 bits (152), Expect = 2e-28 Identities = 226/324 (70%), Gaps = 4/324 (1%) Strand=Plus/Plus Query 26992 TGATTAATTCAACC--GTACTTGTTGGACGTCTAACTAAAGACCCAGAACTTAAATACAC 27049 |||||||| ||| ||||| ||||||||||| || ||||| ||||| | ||| || Sbjct 17855 TGATTAAT--AACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATAC 17912 Query 27050 ACAAAGCAATATCGCAGTAGCATCTTTTAGCCTTGCGGTTAACCGTAACTTTAAGGATGC 27109 | ||| | || |||||| | || | | || || || |||||||| | | Sbjct 17913 ATCAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCA 17972 Query 27110 TAATGGTGAGCGTGAAGCAGATTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAA 27169 || || | ||||| || |||||||| ||||| || || ||||| | ||| |||| Sbjct 17973 AAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAAC 18032 Query 27170 TTTGGCTAATTGGGCTAAAAAAGGCGCATTGATTGGAATTACTGGACGTATTCAGACCCG 27229 | || || | || | ||||| | | | || | ||||| |||||||| || || Sbjct 18033 ACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCG 18092 Query 27230 TAGCTATGAAAACCAACAAGGGCAACGAGTGTATGTGACAGAGGTAGTCGCTGAGAACTT 27289 | ||||| || |||||||| ||||| ||||| || ||||| ||||| ||||| ||||| Sbjct 18093 TTCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTT 18152 Query 27290 CCAAATGCTAGAAAGTCGTGCAGC 27313 |||| | | |||||||||||||| Sbjct 18153 CCAATTATTGGAAAGTCGTGCAGC 18176 >seq1539 Length=57711 Score = 116 bits (128), Expect = 8e-22 Identities = 177/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 27063 GCAGTAGCATCTTTTAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGT 27122 ||||| || |||||| | | || ||||| || || |||| | || || || | || Sbjct 16101 GCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGA 16042 Query 27123 GAAGCAGATTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGG 27182 ||||| |||||||||||||| || || ||||| | | ||| |||| |||||| | Sbjct 16041 GAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTA 15982 Query 27183 GCTAAAAAAGGCGCATTGATTGGAATTACTGGACGTATTCAGACCCGTAGCTATGAAAAC 27242 |||||||| || || || || | ||||| ||||| || || | ||||| ||| Sbjct 15981 GCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAAC 15922 Query 27243 CAACAAGGGCAACGAGTGTATGTGACAGAGGTAGTCGCTGAGAACTTCCAAATGCTAGAA 27302 || ||||| || || || || ||||| || || || || || || |||||| | ||||| Sbjct 15921 CAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAA 15862 Query 27303 AGTCGTGCAGCG 27314 ||| |||||| Sbjct 15861 AGTAAAGCAGCG 15850 >seq14859 Length=68005 Score = 98.7 bits (108), Expect = 2e-16 Identities = 296/457 (65%), Gaps = 0/457 (0%) Strand=Plus/Plus Query 14286 AAGCTGAAAAGTTCGCATGGCAAGCGTGGGCTACGCTTAGGTCTCTTGGTTATTCAGAAG 14345 |||| ||||| |||||| || ||| | | ||||| | | ||| ||||| ||| Sbjct 43718 AAGCCGAAAAACGAGCATGGAAAATTTGGACGATGCTTAAAGCACGTGGATATTCTGAAT 43777 Query 14346 GTGCATCGGCTGGCATTTTAGGAAATATCAATGGTGAAGCTGGTCCAAGTATGAATCCTG 14405 |||| | || || || || || || || | || |||| || |||| |||||||||| Sbjct 43778 ATGCAGCCGCAGGTATATTGGGGAACATTCAGGGGGAAGTCGGAGCAAGCATGAATCCTG 43837 Query 14406 ATATTGATCAGGTTGGAGGACCCGCTTATGGCGCTGTGCAGTTTGACGGATCAGCATATC 14465 | | || ||||| || || || || ||||| ||| || | || ||||| || |||| Sbjct 43838 ACACCGAACAGGTGGGTGGGCCAGCCTATGGACTTGTTCAATGGGATGGATCTGCTTATC 43897 Query 14466 CACTTGTAGGAACACGAACAAACAATGGCCGTGAGTATTTCCAAAGACTTGTAAAAGCTG 14525 || | |||||| ||| ||| || || || |||||| | || | | | || | | Sbjct 43898 CATTAGTAGGATCACCAACTTGGAACGGACGAGAGTATGTTCAGCGTTTGATGAATACCG 43957 Query 14526 CTGGTGTCGCTGGAGATTATCGTGAGATGCCTACTCAGATGAAAGTAGTCAACTGGGCTA 14585 | || || | |||||||| || | || | ||| || | | ||| || Sbjct 43958 CAGGGATCCAAGAAGATTATCAAAGTATCGAAGCGCAAGTAAAATTATTAGATTGGTGTA 44017 Query 14586 TGACGTCGGGTCAATGGATTGGTTCAGTTGCGCCAACAACTGTTGACGGATTTAAAGCTA 14645 || |||||||||||||| ||| ||||| || || |||||||| | | Sbjct 44018 TGTTCAATGGTCAATGGATTGGGAAAGTAAATCCAACCACAGTCTCTGGATTTAAGACAA 44077 Query 14646 TGACTGACGCAGCAAGCGCAGCAACTGTTTTCGAAAGAAACTTCGAACGACCAGCAACGA 14705 | | ||| || || |||||| || ||| |||| |||||||| || ||||| | Sbjct 44078 TCAATGATGCCAAGAGTGCAGCATATGCTTTTGAAATGAACTTCGAGCGTCCAGCTTCTG 44137 Query 14706 CACACCCAGAGCGAAGGGGGTATGCCCAAACTTGGTA 14742 |||| ||||| || ||||| ||| ||||||| Sbjct 44138 CACATCCAGAACGGCAAAATTATGCGCAAGCTTGGTA 44174 Score = 91.5 bits (100), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 16/185 (9%) Strand=Plus/Plus Query 26991 ATGATTAATTCAACC--GTACTTGTTGGACGTCTAACTAAAGACCCAGAACTTA--AATA 27046 ||||||||| ||| ||| | || ||||| ||||||| |||||||| | | |||| Sbjct 19978 ATGATTAAT--AACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAATA 20035 Query 27047 CACACAAAGCAAT----ATCGCAGTAGCATCTTTTAGCCTTGCGGTTAACCGTAACTTTA 27102 | || ||| || ||||| ||| ||||| || ||||| ||||||||||||| Sbjct 20036 CTCAACAAGGAACGACGATCGC--TAG----TTTTACACTAGCGGTCAACCGTAACTTTA 20089 Query 27103 AGGATGCTAATGGTGAGCGTGAAGCAGATTTTATCAATTGCGTTATCTGGCGCCAGCAAG 27162 | || ||||| ||||||||||||||||||| ||||| ||| ||||| || || Sbjct 20090 AAGACCAAAATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGACAG 20149 Query 27163 CTGAA 27167 ||||| Sbjct 20150 CTGAA 20154 >seq3145 Length=45091 Score = 96.9 bits (106), Expect = 7e-16 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27075 TTTAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGTGAAGCAGATTTT 27134 |||| |||||| ||||| || ||||||| || || |||||||||||||| || Sbjct 1878 TTTACCCTTGCAGTTAATCGAAACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTC 1937 Query 27135 ATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGGGCTAAAAAAGGC 27194 | | || || || ||| | | | ||| |||| ||||||||| ||| | || Sbjct 1938 GTTCAATGTGTGATTTGGAGGAAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGA 1997 Query 27195 GCATTGATTGGAATTACTGGACGTATTCAGACCCGTAGCTATGAAAACCAACAAGGGCAA 27254 | ||| | || | || ||||| ||||| || ||| ||||| || || ||||||||| Sbjct 1998 ACCTTGCTAGGCGTGACCGGACGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAA 2057 Query 27255 CGAGTGTATGTGACAGAGGTAGTCGCTGAGAACTTCCAAATGCTAGAA 27302 || || ||||| || || || || || ||||| || ||| || | ||| Sbjct 2058 CGTGTTTATGTAACGGAAGTTGTAGCAGAGAATTTTCAATTGTTGGAA 2105 >seq28223 Length=7146 Score = 89.7 bits (98), Expect = 1e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 22658 TGTCTGATAATCAAAAATACTATTATATGAGGCTCAAACAAGACTTCTTTGAGACGGAAG 22717 || ||||||| | |||||| ||| | | || ||| | | || ||||| | || | Sbjct 188 TGGCTGATAACAAGCGATACTACTATTTAAAACTAAAAGAGAATTTTTTTGATAGTGACG 247 Query 22718 AAATGATAATACTTGAGTCTATGCAAGACGGCTATTTGTATAGCAACATCTTGTTGAAAC 22777 ||||||| | ||||| ||||| ||| |||||| | ||| ||||| | | |||| Sbjct 248 AAATGATTCTTCTTGAAAGTATGCCAGATGGCTATATATATTCTAACATTCTCCTCAAAC 307 Query 22778 TATATTTGAGAAGTTTAAAGCGTGACGGTAAATTGATGTTTAACGACACAATCCCAT 22834 | ||||| ||||| | |||| ||| || || ||||||||||| |||| ||| |||| Sbjct 308 TCTATTTACGAAGTCTGAAGCATGAAGGCAAGTTGATGTTTAATGACAGAATTCCAT 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104412334370328