Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq1216 86.0 1e-11 >seq1216 Length=179962 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/143 (76%), Gaps = 8/143 (6%) Strand=Plus/Minus Query 3058 AACGAGAGCAGACTGTAAATCTGTTGCCTTCGGGCTTCGTAGGTTCAAATCCTTCCCTCG 3117 |||| || | ||||||||||| ||| |||| ||| | || ||||| ||||| ||| Sbjct 40762 AACGCGA-CGGACTGTAAATCCGTT-CCTTAGGGTTCAGT-GGTTCGAATCCA---CTCT 40709 Query 3118 CCACCAAATTCTAGGGGTATAGCCAAGCGGTAAGGCCCAGGGCTTTGA-TCCCTGTATGC 3176 || ||| | | ||||||||||||||||||||||| || |||||| ||||| |||| Sbjct 40708 CCTCCATTTCATTGGGGTATAGCCAAGCGGTAAGGCAAGGGACTTTGACTCCCT-CATGC 40650 Query 3177 TCTGGTTCAAATCCAGATGCCCC 3199 |||||| ||||||| | |||| Sbjct 40649 GTTGGTTCGAATCCAGCTACCCC 40627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 781792457472000