Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq48995 134 3e-26 seq32113 113 1e-19 seq1641 111 4e-19 seq16183 109 1e-18 >seq48995 Length=1108 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| || || || |||||||| || | || || | ||||||| Sbjct 431 AGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGACAATGTGCGCCCATCT 372 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || ||||| || |||||||| ||||| | | || || ||||| ||| Sbjct 371 TCAAGTTGTTTTCCAGCGAAAATGAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCT 312 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| ||| ||| | || | |||| ||| ||| |||||||||||||||||| Sbjct 311 TGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTT 252 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || || | ||||| Sbjct 251 TTACCAGTAAGAGTTTTTACAAAAATTTGCAT 220 Score = 107 bits (118), Expect = 4e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| |||||||| || || || || | | ||| | ||||||||||| ||| || Sbjct 189 AGTAGATTCTTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCC 130 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 ||||| || |||||||| ||||| | | || |||||||| ||||||||||| || Sbjct 129 AGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTT 70 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | |||| | || ||| || ||||| | ||| |||||||| || || || || Sbjct 69 AACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGT 10 Query 152087 CTTCACGAA 152095 ||| || || Sbjct 9 CTTTACAAA 1 >seq32113 Length=13445 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| |||||||| |||||||||||||| || | | || | |||||| Sbjct 7123 AGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 7182 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || |||||||| | |||||| || | | ||| || || || ||| Sbjct 7183 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 7242 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||| ||| | || | |||| ||| || ||||| | |||||| ||| Sbjct 7243 TGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTT 7302 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || || |||| ||||| Sbjct 7303 TTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| ||||||||||||||||||||||| || | | || | |||||| Sbjct 6895 AGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 6954 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || || || |||||||| | || || || | | || || || || ||| Sbjct 6955 TCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 7014 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| || ||| | || | | |||| || ||| || || ||||| ||||| Sbjct 7015 TGAATCTTTGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTC 7074 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || || | ||||| Sbjct 7075 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106 Score = 104 bits (114), Expect = 5e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || |||||||| ||||| ||||| || | | || | Sbjct 6432 GAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCG 6491 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || ||||||||||| | || || || | | |||||||| Sbjct 6492 GCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTC 6551 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||| ||| | || | | ||||||| ||| ||||| | ||| Sbjct 6552 CTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCTAAAGT 6611 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || || || || || || || | |||||| Sbjct 6612 TATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 6651 Score = 100 bits (110), Expect = 7e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| |||||||| || || || || | | ||| | || ||||| | Sbjct 7584 CAAG-TGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCA 7642 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || ||||| || | | || || || | | || |||||||| ||||| Sbjct 7643 ATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 7700 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | | || ||| || ||||| | |||||| ||||| Sbjct 7701 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 7760 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || ||||| |||| ||||||||| Sbjct 7761 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| |||||||||||||| || || | | ||| | ||||| Sbjct 5983 AGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCC 6042 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || |||||||| || | ||| ||||| | | || || ||||| ||| Sbjct 6043 TCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 6102 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | |||| || ||| || || | ||| || || Sbjct 6103 TGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCTAAAGTGATGGTC 6162 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||||| |||||| Sbjct 6163 TTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 6194 >seq1641 Length=3631 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| | || || || ||||| |||||||| || | || || | Sbjct 2375 AGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGT 2316 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||||||||| ||| || || ||||| | | |||||||| | | || |||||| Sbjct 2315 CCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCC 2256 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| ||||| ||| ||| | |||| | || || ||| || || || ||| Sbjct 2255 TTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCGACCTCGAGGGTA 2196 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| || ||||| ||||| | |||||| Sbjct 2195 ATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2157 >seq16183 Length=3749 Score = 109 bits (120), Expect = 1e-18 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || | |||||| ||||| || ||||||||||| | || || | |||||| Sbjct 640 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 699 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||||| ||||| || || || ||||| || ||||| || | | ||||| || || | Sbjct 700 TCTAGCTGCTTT--CCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTAT 757 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | |||||||| ||| ||| | || | | || ||| ||| ||||| | ||| |||| Sbjct 758 CCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAG 817 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 | ||||| || | ||||| ||||| | |||||| |||| Sbjct 818 TCTTGCCAGTCAATGTCTTTACGAAAATTTGCATTCCACCC 858 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| || || || || ||||| || | | || | |||||| Sbjct 184 AGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGTCCATCT 243 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || || |||||||| || ||||| | | ||||||||||| | Sbjct 244 TCAAGCTGCTTT--CCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTAT 301 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||||||||| || ||| | || | |||| || ||| ||||| || || |||| Sbjct 302 CTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAG 361 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| || || ||||| || || | |||||| Sbjct 362 TCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151454225560364