Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_031907.1 Length=33181 Score E Sequences producing significant alignments: (Bits) Value seq1464 141 2e-29 seq3145 116 8e-22 seq1539 113 1e-20 >seq1464 Length=66918 Score = 141 bits (156), Expect = 2e-29 Identities = 235/337 (70%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 24704 ACGACTTTCCAACAGTTGAAAATTACTGGCAACAACTTCTGTGACATAAACACGTTGACC 24763 |||||||||||| | ||| || || ||||| |||||||| || || |||||||| || Sbjct 18171 ACGACTTTCCAATAATTGGAAGTTTTCAGCAACTACTTCTGTTACGTACACACGTTGTCC 18112 Query 24764 TTGCTGGTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTTT 24823 ||| || |||||||| ||| |||||||| || || || || | ||||| ||||| Sbjct 18111 TTGTTGATTATCATAAGAACGCGTTTGAATACGACCAGTTACACCTAAAAGAGTTCCTTT 18052 Query 24824 TTTAGCCCAATTAGCAAGATTTTCAGCTAACTGTCTCCAGATAACGCAATTGATAAAATC 24883 | || | || || || |||| ||| | | || ||| || || ||||| |||||||| Sbjct 18051 ATGTGCATAGTTTGCTAGTGTTTCTGCTGATTTTCGCCAAATCACACAATTAATAAAATC 17992 Query 24884 AGCCTCACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAGC 24943 |||||||| | || | | || | || ||| || ||||| | ||| ||||| || Sbjct 17991 CGCCTCACGGTTGCCGTTTTGGCTCGTGAAGTTACGATTGACAGCTAAAGTGAACGTTGC 17932 Query 24944 AACCGCAAT---ATTAGATTGCGTGTATCTCAGTTCGGCATCTCTTGTAAGTCGCCCTAC 25000 || ||| | | | ||| || |||| | || | |||| |||| || || || || Sbjct 17931 TACAGCAGTGCCACTTGAT---GTATATCGTAAATCTGGATCTTTTGTCAGACGTCCAAC 17875 Query 25001 TAAAACAACGTTATTTATCATTTTG--CACCTCCTCT 25035 || ||||||||||| |||| || || ||||||| Sbjct 17874 TAGTACAACGTTATTAATCAAAATGGTCATCTCCTCT 17838 >seq3145 Length=45091 Score = 116 bits (128), Expect = 8e-22 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 24710 TTCCAACAGTTGAAAATTACTGGCAACAACTTCTGTGACATAAACACGTTGACCTTGCTG 24769 |||||||| ||||||||| || |||||||| || |||||||||||||| |||||||| Sbjct 2105 TTCCAACAATTGAAAATTCTCTGCTACAACTTCCGTTACATAAACACGTTGCCCTTGCTG 2046 Query 24770 GTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTTTTTTAGC 24829 || ||||| ||||||||||||| ||| || || || | | | || | ||| Sbjct 2045 ATTGTCATAAGAACGTGTTTGAATTCGTCCGGTCACGCCTAGCAAGGTTCCCCTGCGAGC 1986 Query 24830 CCAATTAGCAAGATTTTCAGCTAACTGTCTCCAGATAACGCAATTGATAAAATCAGCCTC 24889 ||||||| || |||| ||| | ||||| || || || | | || || || || Sbjct 1985 ATAATTAGCCAGTGTTTCCGCTGGTTTCCTCCAAATCACACATTGAACGAAGTCTGCTTC 1926 Query 24890 ACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAGCAAC 24946 ||||||||| || | || |||| || || || ||||| ||||| ||||| || Sbjct 1925 ACGCTCTCCGGCTTGATTGGTAAAGTTTCGATTAACTGCAAGGGTAAATGTAGCCAC 1869 >seq1539 Length=57711 Score = 113 bits (124), Expect = 1e-20 Identities = 218/319 (68%), Gaps = 2/319 (1%) Strand=Plus/Plus Query 24707 ACTTTCCAACAGTTGAAAATTACTGGCAACAACTTCTGTGACATAAACACGTTGACCTTG 24766 |||||| || ||||| |||||| ||| |||||||| || || || ||||| || ||||| Sbjct 15859 ACTTTCTAATAGTTGGAAATTATCGGCCACAACTTCAGTCACGTAGACACGCTGTCCTTG 15918 Query 24767 CTGGTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTTTTTT 24826 |||||| ||||| | || |||||||| ||| || ||||| | | || ||||| Sbjct 15919 CTGGTTGTCATAAGTCCGCGTTTGAATCCGTCCGACGACGCCGATTAAACTACCCTTTTT 15978 Query 24827 AGCCCAATTAGCAAGATTTTCAGCTAACTGTCTCCAGATAACGCAATTGATAAAATCAGC 24886 ||| | |||| | |||| ||| | | ||| || || ||||||||||||||||| Sbjct 15979 AGCTAATGTAGCCATCGTTTCCGCTGGTTTACGCCAAATCACACAATTGATAAAATCAGC 16038 Query 24887 CTCACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAGCAAC 24946 || || | || | ||| |||| || || || || | ||||| || || || Sbjct 16039 TTCTCGATTGCCGTTTTGATTCGTAAAATTGCGATTAACGGCTAAGGTAAAAGTGGCCAC 16098 Query 24947 CGCAATATTAGATTGC-GTGTATCTCAGTTCGGCATCTCTTGTAAGTCGCCCTACTAAAA 25005 || | | |||| || || | | |||| |||| | || | || ||||||||| Sbjct 16099 TGCTGTGCCA-CTTGCGGTATAACGTAAATCGGGATCTTTGGTTAACCGTCCTACTAAAG 16157 Query 25006 CAACGTTATTTATCATTTT 25024 || ||||| |||||||| Sbjct 16158 TTACATTATTGATCATTTT 16176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105855984767544