Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_031907.1
Length=33181
Score E
Sequences producing significant alignments: (Bits) Value
seq1464 141 2e-29
seq3145 116 8e-22
seq1539 113 1e-20
>seq1464
Length=66918
Score = 141 bits (156), Expect = 2e-29
Identities = 235/337 (70%), Gaps = 8/337 (2%)
Strand=Plus/Minus
Query 24704 ACGACTTTCCAACAGTTGAAAATTACTGGCAACAACTTCTGTGACATAAACACGTTGACC 24763
|||||||||||| | ||| || || ||||| |||||||| || || |||||||| ||
Sbjct 18171 ACGACTTTCCAATAATTGGAAGTTTTCAGCAACTACTTCTGTTACGTACACACGTTGTCC 18112
Query 24764 TTGCTGGTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTTT 24823
||| || |||||||| ||| |||||||| || || || || | ||||| |||||
Sbjct 18111 TTGTTGATTATCATAAGAACGCGTTTGAATACGACCAGTTACACCTAAAAGAGTTCCTTT 18052
Query 24824 TTTAGCCCAATTAGCAAGATTTTCAGCTAACTGTCTCCAGATAACGCAATTGATAAAATC 24883
| || | || || || |||| ||| | | || ||| || || ||||| ||||||||
Sbjct 18051 ATGTGCATAGTTTGCTAGTGTTTCTGCTGATTTTCGCCAAATCACACAATTAATAAAATC 17992
Query 24884 AGCCTCACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAGC 24943
|||||||| | || | | || | || ||| || ||||| | ||| ||||| ||
Sbjct 17991 CGCCTCACGGTTGCCGTTTTGGCTCGTGAAGTTACGATTGACAGCTAAAGTGAACGTTGC 17932
Query 24944 AACCGCAAT---ATTAGATTGCGTGTATCTCAGTTCGGCATCTCTTGTAAGTCGCCCTAC 25000
|| ||| | | | ||| || |||| | || | |||| |||| || || || ||
Sbjct 17931 TACAGCAGTGCCACTTGAT---GTATATCGTAAATCTGGATCTTTTGTCAGACGTCCAAC 17875
Query 25001 TAAAACAACGTTATTTATCATTTTG--CACCTCCTCT 25035
|| ||||||||||| |||| || || |||||||
Sbjct 17874 TAGTACAACGTTATTAATCAAAATGGTCATCTCCTCT 17838
>seq3145
Length=45091
Score = 116 bits (128), Expect = 8e-22
Identities = 168/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 24710 TTCCAACAGTTGAAAATTACTGGCAACAACTTCTGTGACATAAACACGTTGACCTTGCTG 24769
|||||||| ||||||||| || |||||||| || |||||||||||||| ||||||||
Sbjct 2105 TTCCAACAATTGAAAATTCTCTGCTACAACTTCCGTTACATAAACACGTTGCCCTTGCTG 2046
Query 24770 GTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTTTTTTAGC 24829
|| ||||| ||||||||||||| ||| || || || | | | || | |||
Sbjct 2045 ATTGTCATAAGAACGTGTTTGAATTCGTCCGGTCACGCCTAGCAAGGTTCCCCTGCGAGC 1986
Query 24830 CCAATTAGCAAGATTTTCAGCTAACTGTCTCCAGATAACGCAATTGATAAAATCAGCCTC 24889
||||||| || |||| ||| | ||||| || || || | | || || || ||
Sbjct 1985 ATAATTAGCCAGTGTTTCCGCTGGTTTCCTCCAAATCACACATTGAACGAAGTCTGCTTC 1926
Query 24890 ACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAGCAAC 24946
||||||||| || | || |||| || || || ||||| ||||| ||||| ||
Sbjct 1925 ACGCTCTCCGGCTTGATTGGTAAAGTTTCGATTAACTGCAAGGGTAAATGTAGCCAC 1869
>seq1539
Length=57711
Score = 113 bits (124), Expect = 1e-20
Identities = 218/319 (68%), Gaps = 2/319 (1%)
Strand=Plus/Plus
Query 24707 ACTTTCCAACAGTTGAAAATTACTGGCAACAACTTCTGTGACATAAACACGTTGACCTTG 24766
|||||| || ||||| |||||| ||| |||||||| || || || ||||| || |||||
Sbjct 15859 ACTTTCTAATAGTTGGAAATTATCGGCCACAACTTCAGTCACGTAGACACGCTGTCCTTG 15918
Query 24767 CTGGTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTTTTTT 24826
|||||| ||||| | || |||||||| ||| || ||||| | | || |||||
Sbjct 15919 CTGGTTGTCATAAGTCCGCGTTTGAATCCGTCCGACGACGCCGATTAAACTACCCTTTTT 15978
Query 24827 AGCCCAATTAGCAAGATTTTCAGCTAACTGTCTCCAGATAACGCAATTGATAAAATCAGC 24886
||| | |||| | |||| ||| | | ||| || || |||||||||||||||||
Sbjct 15979 AGCTAATGTAGCCATCGTTTCCGCTGGTTTACGCCAAATCACACAATTGATAAAATCAGC 16038
Query 24887 CTCACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAGCAAC 24946
|| || | || | ||| |||| || || || || | ||||| || || ||
Sbjct 16039 TTCTCGATTGCCGTTTTGATTCGTAAAATTGCGATTAACGGCTAAGGTAAAAGTGGCCAC 16098
Query 24947 CGCAATATTAGATTGC-GTGTATCTCAGTTCGGCATCTCTTGTAAGTCGCCCTACTAAAA 25005
|| | | |||| || || | | |||| |||| | || | || |||||||||
Sbjct 16099 TGCTGTGCCA-CTTGCGGTATAACGTAAATCGGGATCTTTGGTTAACCGTCCTACTAAAG 16157
Query 25006 CAACGTTATTTATCATTTT 25024
|| ||||| ||||||||
Sbjct 16158 TTACATTATTGATCATTTT 16176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 105855984767544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |