Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1641 132 1e-25 seq16183 131 4e-25 seq32113 123 6e-23 seq48995 114 3e-20 seq36723 98.7 2e-15 >seq1641 Length=3631 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || ||||| || ||||||||||| || ||| || Sbjct 2161 CAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTCGAGGCCTCTGAT 2220 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || || || ||||| || || || ||||||||| Sbjct 2221 ACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAA 2280 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| || ||||||||| | || | | || || ||| | Sbjct 2281 CGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACATT 2340 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| ||| |||||||||| Sbjct 2341 CAAAAGGAATCCACATTGCATCTTGT 2366 >seq16183 Length=3749 Score = 131 bits (144), Expect = 4e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| |||||||| || || || ||||| || ||| | || |||||| || ||| Sbjct 164 CAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTGAC 105 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||||||||||||| || || || || || ||| Sbjct 104 ACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCTGATCAACAA 45 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 |||| || ||||| |||||||| || |||||||| Sbjct 44 AGACTGATTTTCGCTGGAAAACAACTGGAAGATGG 10 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||| | || || ||||| ||||| | || |||||| || || Sbjct 1076 CAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTGAT 1017 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||| || ||||| ||||| || ||||| || || ||| Sbjct 1016 ACAATCGAAAACGTAAAGGCAAAGATACAAGACAAGGAAGGCATTCCTCCAGATCAACAA 957 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || ||||||||||| || || |||||||| | || || | || ||||| || Sbjct 956 AGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACGCTGTCAGACTATAATATC 897 Query 178104 CAAAAAGAATCAACACTGCA 178123 || || ||||| || |||| Sbjct 896 CAGAAGGAATCTACTTTGCA 877 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || ||||| | || || || || || Sbjct 848 CAAATTTTCGTAAAGACATTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCTGAT 789 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || |||||||| ||||| ||||| || || || |||||| Sbjct 788 ACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAA 729 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || || ||||| ||||| ||||||||| | || || | ||||| ||| | Sbjct 728 AGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAACATT 669 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || |||| || || Sbjct 668 CAGAAAGAATCTACTTTGCACCTAGT 643 >seq32113 Length=13445 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| | |||||||| || ||| Sbjct 6191 CAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTAGAGGTGGAGCCATCCGAC 6132 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| || ||||| || || || || || ||||| || Sbjct 6131 ACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 6072 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||| | || ||||| | ||||| | || |||||| || Sbjct 6071 CGTCTAATCTTCGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAACATC 6012 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||||||||| || ||||| Sbjct 6011 CAAAAAGAATCTACTTTGCAT 5991 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| || || |||||||| || || | || || || |||||| Sbjct 6647 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTAGAAGTTGAGCCATCAGAC 6588 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| |||||||| || || |||||||| ||||| || || ||| Sbjct 6587 ACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAACAA 6528 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || || || |||||||| | || || | || || || || Sbjct 6527 CGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAATATC 6468 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || || |||| Sbjct 6467 CAGAAAGAGTCCACCCTTCA-CTTG 6444 Score = 118 bits (130), Expect = 3e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| ||||||||||| ||||| | ||||| ||| || ||| Sbjct 7559 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCCGAC 7500 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||| || |||||||| || || || || || || || Sbjct 7499 ACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAG 7440 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || || |||||||| || |||||||| | || | | |||||||| | Sbjct 7439 AGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATT 7380 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| ||||| || || ||| | || ||| Sbjct 7379 CAAAAGGAATCTACCCTACATTTAGTATTG 7350 Score = 111 bits (122), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| || || || ||||| || || | || || ||| Sbjct 7793 AAAATGC---AGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 7737 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| || ||||| ||||| ||||| || ||||| Sbjct 7736 CCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCA 7677 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| | || ||||| ||||| || | ||||| ||| | |||||| | || Sbjct 7676 GATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGAC 7617 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||||| | ||||||||||| || || || |||| Sbjct 7616 TATAATATTCAAAAAGAATCTACTCTTCA-CTTG 7584 >seq48995 Length=1108 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 || || || || || || || ||||| ||||| | || |||||| || || || || Sbjct 1 TTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGATACAATA 60 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || || ||||| ||||| ||||| || ||||| ||||| || | || Sbjct 61 GAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAGAGGCTG 120 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 || ||||| || |||||||| ||||||||| | ||||| | || ||||| | |||||| Sbjct 121 ATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAATATTCAAAAA 180 Query 178110 GAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || |||| | ||| || | || ||| Sbjct 181 GAATCTACTTTGCACTTAGTTCTGCGTCTAAGA 213 >seq36723 Length=1181 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || |||||||| ||||| || ||| ||| Sbjct 1125 CAGATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAC 1066 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || |||||||| ||||| ||||| || |||||||| || || || || |||||||| Sbjct 1065 ACTATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGACCAGCA 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201262255524296