Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AC_000003.1 Length=30536 Score E Sequences producing significant alignments: (Bits) Value seq3063 150 4e-32 >seq3063 Length=7092 Score = 150 bits (166), Expect = 4e-32 Identities = 223/311 (72%), Gaps = 4/311 (1%) Strand=Plus/Plus Query 10059 GTAACAGCCTATGAGCACACTGTGAAGGCAGAAG-TTAACTTTCAAACAACCTTTAATAA 10117 || || || || ||||| || ||||| ||| || |||||||||||| || |||||| || Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAAC-CAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 10118 CAACGTGCGAACCCTTATAGCCAGGGAAGAGGTGGTTATTGGCCTGATGCATTTATGGGA 10177 | ||||||| || ||| | || | || ||||||| ||| || ||||||||| | ||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 10178 CTTTGTAGAGGCCTTTCTAG-AGAACCCAGTGAGCAAGGCTCTCACTGCCCAACTTTTTC 10236 ||||||| || | | || | |||||| |||||| | |||| || || || || | Sbjct 6792 CTTTGTA-AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCC 6850 Query 10237 TTATAGTTCAGCATTGTAGGGACGAGGGGGTACTACGGGAAAGTTTGCTTAATATTGCCG 10296 ||||||| ||||| | |||||| | | || | | |||| |||| || || | | Sbjct 6851 TTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 6910 Query 10297 AACCCGAGAGCCGGTGGCTGGTAGACCTGTTAAACCTGTTACAAACAATCGTTGTGCAAG 10356 | |||||| |||| |||||| | || || ||||| | | || | || || ||||| | Sbjct 6911 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGG 6970 Query 10357 AGCGAAGTTTG 10367 |||| || ||| Sbjct 6971 AGCGCAGCTTG 6981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97588606196484