Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000005.1
Length=34125
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 289 6e-74
>seq3063
Length=7092
Score = 289 bits (320), Expect = 6e-74
Identities = 316/420 (75%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 10827 GTAACAGCATATGAACAAACGGTTACAGAGGAACGTAACTTTCAAAAAAGCTTTAATAAC 10886
|| || || || || || ||||| | |||| ||||||||||||||||||||| |||
Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732
Query 10887 CATGTGCGCACACTAATAGCGCGAGAAGAAGTAGCCATTGGTTTAATGCATCTTTGGGAC 10946
|| |||||||| || | ||||| || || || || || || | |||||||| ||||||
Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792
Query 10947 TTTGTAGAAGCTTATGTACATAATCCAGCAAGTAAACCCCTAACTGCCCAGCTGTTCTTA 11006
|||||| || | || || ||| || || || || | || ||||||||| |
Sbjct 6793 TTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 6852
Query 11007 ATAGTTCAACATAGTAGAGACAATGAAACTTTTAGGGATGCAATGCTTAACATAGCTGAA 11066
||||| || || || || ||||| || | || |||||||| |||| ||||||| ||
Sbjct 6853 ATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 6912
Query 11067 CCCCAGGGTCGGTGGTTACTCGATTTAATTAACATTCTGCAGAGCATTGTGGTTCAGGAA 11126
||| |||| || ||| | |||||||| || ||||||||||||||||| ||||| |||||
Sbjct 6913 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 6972
Query 11127 CGCAGTCTTAGTTTGGCAGACAAGGTGGCCGCCATTAATTACTCCATGTTAAGTTTGGGA 11186
||||| | || |||| |||||||||||||||||||| || |||||| | ||| ||||
Sbjct 6973 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 7032
Query 11187 AAGTTTTATGCTCGTAAAATCTACAAAAGTCCGTATGTTCCCATTGACAAGGAAGTGAAG 11246
|||||||| || || || || ||| | | || || |||||||| |||||||| || |||
Sbjct 7033 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 107 bits (118), Expect = 4e-19
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 14988 CCAACATCCAGTGCGCGTACGCGGACATTACCGAGCTCCATGGGGCGCGCATACCCGAGG 15047
|||||| ||||||||||| ||||| || ||||| || || ||||||||||| | || ||
Sbjct 41 CCAACACCCAGTGCGCGTGCGCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGG 100
Query 15048 ACGCACTGGTCGCACCACTGTAGACGATGTTATTGACTCGGTAGTGGCCGATGCTCGCAA 15107
|||||||| |||||||| || || || | |||||| |||| |||| || || |||||
Sbjct 101 CCGCACTGGGCGCACCACCGTCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAA 160
Query 15108 GTAC 15111
|||
Sbjct 161 CTAC 164
Score = 102 bits (112), Expect = 2e-17
Identities = 141/193 (73%), Gaps = 7/193 (4%)
Strand=Plus/Plus
Query 15680 GCGCCCAGACGTAGGGTACAGTGGAAGGGACGGCAAGTAAAACGCATTTTGCGACCGGGC 15739
|||||||| || ||||||||||||| || || | |||| ||| |||||||||| |||
Sbjct 792 GCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGC 851
Query 15740 ACCACAGTGGTTTTTTCTCCCGGAGAGCGAACGATTATGCGTCCCCTA-AAGCGCGAGTA 15798
||||| || |||||| | ||||| ||||| | | | | |||| ||||||| |||
Sbjct 852 ACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCA----CCCGCACCTACAAGCGCGTGTA 907
Query 15799 CGACGAAGTGTACGCAGACGATGACATTTTGGAGCAAGCGGCACAACAGACT-GGGGAAT 15857
|| || ||||||| ||||| ||| | | ||||| || || | | || ||||| |
Sbjct 908 TGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGC-CAACGAGCGCCTCGGGGAGT 966
Query 15858 TTGCATATGGAAA 15870
|||| || |||||
Sbjct 967 TTGCCTACGGAAA 979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 109072818526446
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