Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000006.1
Length=35100
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 408 9e-110
>seq3063
Length=7092
Score = 408 bits (452), Expect = 9e-110
Identities = 343/421 (81%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11014 GGTGACGGCCTACGAGCAGACGGTGAAGCAGGAGCGCAACTTCCAAAAGAGTTTCAACAA 11073
||| || || ||||||||||||||||| |||||| ||||| ||||| || || |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11074 CCATGTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTGTGGGA 11133
||| |||||||| || | ||||||||||||||||| | || |||||||| ||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11134 CCTGGCGGAGGCCATCGTGCAGAACCCGGACAGCAAGCCTCTGACGGCGCAGCTGTTCCT 11193
| | | || | | ||| ||||| | |||||||| || | |||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11194 GGTGGTACAGCACAGCAGGGACAACGAGGCGTTCAGGGAGGCGCTGCTAAACATCGCCGA 11253
| || ||||||||||||||||||||||| |||||||| |||||||||||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11254 GCCCGAGGGTCGCTGGCTGCTGGAGCTGATCAACATCTTGCAGAGCATCGTAGTTCAGGA 11313
||||||||| ||||||||||| || |||| ||||| |||||||||| || || |||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11314 GCGCAGCCTGAGCTTGGCCGAGAAGGTGGCGGCAATCAACTACTCGGTGCTTAGCCTGGG 11373
||||||| ||||| |||| || |||||||| || || ||||| || |||| || |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11374 CAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAGGAGGTGAA 11433
|||||||||||| |||||||| ||| | || || ||||| ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11434 G 11434
|
Sbjct 7092 G 7092
Score = 123 bits (136), Expect = 6e-24
Identities = 273/405 (67%), Gaps = 31/405 (8%)
Strand=Plus/Plus
Query 15699 ATGTCAAAGCGCATCTACAAG--AGAGATGCTCCAGGTCGTCGCCCCGGAGATTTACGGA 15756
||||| ||||||| ||| |||||||||||||||| |||| |||||||| || ||
Sbjct 618 ATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCGCGCCGGAGATCTATGGC 677
Query 15757 CCACCCCAGGCGGACCAG---------AAACCCCGCAAAATCAAGCGGGTTaaaaa---- 15803
|| || || ||| || || ||||| || | |||||||| |||||
Sbjct 678 CCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAAAGCGGGTCAAAAAGAAA 737
Query 15804 ---aaaG--GATGAGG-TGGAC--GAGGGGGCAGTAGAGTTTGTGCGCGAGTTCGCTCCG 15855
|||| ||||| | || || || | | || || | ||| || ||| ||
Sbjct 738 AAGAAAGATGATGATGATGAACTTGACGACGAGGTGGAACTGCTGCACGCAACCGCGCCC 797
Query 15856 CGGCGGCGCGTAAATTGGAAGGGGCGCAG-GTGC-ACGCGTGTTGCGGCCCGGCACGGCG 15913
||||||| ||| | ||||| || || | || ||| || ||||| |||||||| |
Sbjct 798 AGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGCACCACC 857
Query 15914 GTGGTGTTCACGCCCGGCGAGCGGTCCTCGGTCAGGAGCAAGCGTAGCTATGACGAGGTG 15973
|| || || |||||||| ||||| ||| | || |||||| ||||| ||||||
Sbjct 858 GTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGCGCGTGTATGATGAGGTG 917
Query 15974 TACGGCGACGACGACATCCTGGACCAGGCGGCAGAGCGGGCGGGCGAGTTTGCCTACGGG 16033
||||||||||| ||| | || || ||||| ||||| || ||||||||||||||
Sbjct 918 TACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTACGGA 977
Query 16034 AAGCGGTCGCGCGAAGAGGAGCTGATCTCGCTGCCGCTGGACGAG 16078
|||||| | |||| || | || ||||||||||||||
Sbjct 978 AAGCGG------CATAAGGACATGTTGGCGTTGCCGCTGGACGAG 1016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 112192658877996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |