Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000007.1
Length=35937
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 1653 0.0
>seq3063
Length=7092
Score = 1653 bits (1832), Expect = 0.0
Identities = 971/1021 (95%), Gaps = 3/1021 (0%)
Strand=Plus/Plus
Query 15922 TCCCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGC 15981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TCCCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGC 60
Query 15982 GCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCG 16041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCG 120
Query 16042 TCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCAC 16101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCAC 180
Query 16102 CAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGTTATGCTA 16161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGTTATGCTA 240
Query 16162 AAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGCCG 16221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGCCG 300
Query 16222 CCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGCCA 16281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGCCA 360
Query 16282 TGCGGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAGGCGAC 16341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TGCGGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAGGCGAC 420
Query 16342 GAGCGNNNNNNNNNNNNNNNNNNNCCATTAGTGCTATGACTCAGGGTCGCAGGGGCAACG 16401
||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 GAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGGCAACG 480
Query 16402 TGTACTGGGTGCGCGACTCGGTTAGCGGCCTGCGCGTGCCCGTGCGCACCCGCCCCCCGC 16461
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 481 TGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCCCCCGC 540
Query 16462 GCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGCGGCGG 16521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGCGGCGG 600
Query 16522 CGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCG 16581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCG 660
Query 16582 CGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAA 16641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAA 720
Query 16642 AGCGGGTCAAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGACGACGAGGTGGAAC 16701
|||||||||||||| |||||||||||||||||||
Sbjct 721 AGCGGGTCAAAAAG---AAAAAGAAAGATGATGATGATGAACTTGACGACGAGGTGGAAC 777
Query 16702 TGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTG 16761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTG 837
Query 16762 TTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACA 16821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 TTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACA 897
Query 16822 AGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCC 16881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 AGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCC 957
Query 16882 TCGGGGAGTTTGCCTACGGAAAGCGGCATAAGGACATGTTGGCGTTGCCGCTGGACGAGG 16941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TCGGGGAGTTTGCCTACGGAAAGCGGCATAAGGACATGTTGGCGTTGCCGCTGGACGAGG 1017
Query 16942 G 16942
|
Sbjct 1018 G 1018
Score = 755 bits (836), Expect = 0.0
Identities = 420/421 (99%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11507 GGTAACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 11566
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11567 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 11626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11627 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 11686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11687 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 11746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11747 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 11806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11807 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 11866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11867 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 11926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11927 G 11927
|
Sbjct 7092 G 7092
Score = 84.2 bits (92), Expect = 5e-12
Identities = 46/46 (100%), Gaps = 0/46 (0%)
Strand=Plus/Plus
Query 10671 TCGAACCCCGGATCCGGCCGTCCGCCGTGATCCATGCGGTTACCGC 10716
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6635 TCGAACCCCGGATCCGGCCGTCCGCCGTGATCCATGCGGTTACCGC 6680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114870921825942
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