Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000008.1
Length=35938
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 1622 0.0
>seq3063
Length=7092
Score = 1622 bits (1798), Expect = 0.0
Identities = 962/1018 (94%), Gaps = 0/1018 (0%)
Strand=Plus/Plus
Query 15927 TCCCAAGCAAGATGTTTGGCGGGGCCAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGC 15986
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 TCCCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGC 60
Query 15987 GCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCG 16046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCG 120
Query 16047 TCGATGACGCCATCGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCAC 16106
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCAC 180
Query 16107 CAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGCTATGCTA 16166
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 181 CAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGTTATGCTA 240
Query 16167 AAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGCCG 16226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGCCG 300
Query 16227 CCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGCCA 16286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGCCA 360
Query 16287 TGCGGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAGGCGAC 16346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TGCGGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAGGCGAC 420
Query 16347 GAGCGNNNNNNNNNNNNNNNNNNNCCATTAGTGCTATGACTCAGGGTCGCAGGGGCAACG 16406
||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 GAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGGCAACG 480
Query 16407 TGTATTGGGTGCGCGACTCGGTTAGCGGCCTGCGCGTGCCCGTGCGCACCCGCCCCCCGC 16466
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 481 TGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCCCCCGC 540
Query 16467 GCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGCGGCGG 16526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGCGGCGG 600
Query 16527 CGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCG 16586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCG 660
Query 16587 CGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAA 16646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAA 720
Query 16647 AGCGGGTCAAAAAGNNNNNNNNNNNNNNNNNNNNNNNNCTTGACGACGAGGTGGAACTGC 16706
|||||||||||||| ||||||||||||||||||||||
Sbjct 721 AGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAGGTGGAACTGC 780
Query 16707 TGCACGCTACCGCGCCCAGGCGACGGGTACAGTGGAAAGGTCGACGCGTAAAACGTGTTT 16766
||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 781 TGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTT 840
Query 16767 TGCGACCCGGCACCACCGTAGTCTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGC 16826
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 841 TGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGC 900
Query 16827 GCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCG 16886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCG 960
Query 16887 GGGAGTTTGCCTACGGAAAGCGGCATAAGGACATGCTGGCGTTGCCGCTGGACGAGGG 16944
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 961 GGGAGTTTGCCTACGGAAAGCGGCATAAGGACATGTTGGCGTTGCCGCTGGACGAGGG 1018
Score = 728 bits (806), Expect = 0.0
Identities = 414/421 (98%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11517 GGTAACCGCATACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 11576
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11577 CCACGTGCGTACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 11636
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11637 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 11696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11697 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 11756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11757 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATCCTGCAGAGCATAGTGGTGCAGGA 11816
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11817 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATCAACTATTCCATGCTTAGCCTGGG 11876
|||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11877 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 11936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11937 G 11937
|
Sbjct 7092 G 7092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114874121662200
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