Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AC_000009.1 Length=32621 Score E Sequences producing significant alignments: (Bits) Value seq3063 208 2e-49 >seq3063 Length=7092 Score = 208 bits (230), Expect = 2e-49 Identities = 295/412 (72%), Gaps = 2/412 (0%) Strand=Plus/Plus Query 9751 ACCGCCTACCAGCAGACGGTGAAAGAGGAAGTTAATTTTCAAAAGACATTCAACAACAAT 9810 ||||| ||| ||||||||||||| |||| |||| |||||||| | || |||||| | Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 9811 GTGCGCACCCTGGTGTCCAGAGAGGAGGTGGCTGTGGGACTGATGCACTTGTGGGACTTT 9870 |||||||| || ||| | | |||||||||||| | ||||||||||| ||||||||||| Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795 Query 9871 GTGGAGGCGTATGTGGGTAACCCGTCCTCCAAGGCTCTGACGGCGCAGTTGTTCTTGATT 9930 || ||| | | ||||| |||| | || | ||||||| ||||| | || Sbjct 6796 GTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 6855 Query 9931 GTGCAACACTGCCGCGACGACGGTGTTCTCAAAGAGGCGCTTCTCAACATTGCCGAGCCG 9990 ||||| ||| || | ||| ||| | ||| || ||||| || ||||| | ||||| Sbjct 6856 GTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCC 6915 Query 9991 GAAGGGCGGTGGTTGTTGGATCTGATAAACTTGTTACAGACCATCGTGGTTCAGGAGAG- 10049 || || || ||| || | ||| |||||||| | | |||| ||| ||||| |||||| | Sbjct 6916 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGC 6975 Query 10050 GGCTCTGAGTCTGACGGAGAAAGTGGCCGCCATCAACTACTCCGTCATTACGCTGAGCAA 10109 ||| |||| ||| | || || ||||||||||| ||||| ||| | | | ||| |||| Sbjct 6976 AGCT-TGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAA 7034 Query 10110 ACACTACGCTAGAAAGATTTTCAAGACGGTGTTTGTGCCCATAGACAAGGAG 10161 ||||| | ||||| | | | || | || ||||||||||||||| Sbjct 7035 GTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAG 7086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104260264794414