Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000017.1
Length=36001
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 1609 0.0
>seq3063
Length=7092
Score = 1609 bits (1784), Expect = 0.0
Identities = 959/1018 (94%), Gaps = 0/1018 (0%)
Strand=Plus/Plus
Query 15946 TCCCAAGCAAGATGTTTGGCGGGGCCAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGC 16005
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 TCCCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGC 60
Query 16006 GCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCG 16065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCGGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCG 120
Query 16066 TCGATGACGCCATCGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCGC 16125
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 121 TCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCAC 180
Query 16126 CAGTGTCCACCGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGCTATGCTA 16185
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 181 CAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGTTATGCTA 240
Query 16186 AAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGCCG 16245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGCCG 300
Query 16246 CCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGCCA 16305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGCCA 360
Query 16306 TGCGAGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAGGCGAC 16365
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TGCGGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAGGCGAC 420
Query 16366 GAGCGNNNNNNNNNNNNNNNNNNNCCATTAGTGCTATGACTCAGGGTCGCAGGGGCAACG 16425
||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 GAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGGCAACG 480
Query 16426 TGTACTGGGTGCGCGACTCGGTTAGCGGCCTGCGCGTGCCCGTGCGCACCCGCCCCCCGC 16485
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 481 TGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCCCCCGC 540
Query 16486 GCAACTAGATTGCAATAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGCGGCGG 16545
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGCGGCGG 600
Query 16546 CGGCGCGCATCGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCG 16605
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCG 660
Query 16606 CGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAA 16665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAA 720
Query 16666 AGCGGGTCAAAAAGNNNNNNNNNNNNNNNNNNNNNNNNCTTGACGACGAGGTGGAACTGT 16725
|||||||||||||| |||||||||||||||||||||
Sbjct 721 AGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAGGTGGAACTGC 780
Query 16726 TGCACGCGACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTT 16785
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTT 840
Query 16786 TGCGACCCGGCACCACCGTAGTCTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGC 16845
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 841 TGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGC 900
Query 16846 GCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCG 16905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCG 960
Query 16906 GGGAGTTTGCCTACGGAAAGCGGCATAAGGACATGCTGGCGTTGCCGCTGGACGAGGG 16963
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 961 GGGAGTTTGCCTACGGAAAGCGGCATAAGGACATGTTGGCGTTGCCGCTGGACGAGGG 1018
Score = 733 bits (812), Expect = 0.0
Identities = 415/421 (99%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11526 GGTAACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 11585
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11586 CCACGTGCGCACGCTTGTAGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 11645
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11646 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGTTGTTTCT 11705
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11706 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGTTAAACATAGTAGA 11765
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11766 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAATATTCTGCAGAGCATAGTGGTGCAGGA 11825
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11826 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 11885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11886 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 11945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11946 G 11946
|
Sbjct 7092 G 7092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 115075711346454
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