Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000018.1
Length=35514
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 279 1e-70
>seq3063
Length=7092
Score = 279 bits (308), Expect = 1e-70
Identities = 310/414 (75%), Gaps = 0/414 (0%)
Strand=Plus/Plus
Query 11546 GCCTACGAGCAGACCGTGAAGGAGGAGCGCAACTTCCAAAAATCTTTTAACAACCATGTG 11605
|| ||||||||||| ||||| ||||| ||||| |||||| ||||||||||| |||
Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738
Query 11606 CGCACCCTGATCGCCCGCGAGGAAGTGACCCTGGGTCTGATGCATCTGTGGGACCTGATG 11665
||||| || | || |||||||| ||| | | || |||||||||||||||||| | |
Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTTGTA 6798
Query 11666 GAGGCTATCACCCAGAACCCCACTAGCAAACCACTGACAGCTCAGCTGTTTCTGGTGGTT 11725
|| | || ||||| | |||||| || || | || |||||||| || | ||
Sbjct 6799 AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGTG 6858
Query 11726 CAACATAGCAGGGACAACGAGGCATTCAGGGAGGCGTTGTTGAACATCACCGAGCCTGAT 11785
|| || |||||||||||||||||||||||||| ||| || | ||||| ||||| ||
Sbjct 6859 CAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCGAG 6918
Query 11786 GGGAGATGGCTGTATGATCTGATCAACATCCTGCAAAGTATTATAGTGCAGGAACGTAGC 11845
|| | |||||| ||| |||| ||||| ||||| || || | |||||||| || |||
Sbjct 6919 GGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCAGC 6978
Query 11846 CTGGGTTTGGCTGAGAAAGTGGCAGCTATCAACTACTCGGTCTTGAGCCTGGGCAAATAC 11905
|| | ||||||| || ||||| || || ||||| || | | || |||||||| |
Sbjct 6979 TTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGTTT 7038
Query 11906 TACGCTCGCAAGATCTACAAGACCCCCTACGTACCCATAGATAAGGAGGTAAAG 11959
||||| |||||||| ||| | ||||| ||||| |||||||| ||||||||||||
Sbjct 7039 TACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 172 bits (190), Expect = 1e-38
Identities = 633/992 (64%), Gaps = 88/992 (9%)
Strand=Plus/Plus
Query 15853 CAAGATGTATGGAGGCGCCCGCAAACGCTCTACCCAGCACCCTGTGCGCGTTCGCGGTCA 15912
|||||||| ||| || || || ||||| ||| ||||| |||||||| ||||| ||
Sbjct 8 CAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCA 67
Query 15913 TTTCCGCGCTCCCTGGGGCGCACTCAAGGGTCGTACCCGCACTCGG---ACCACGGTCGA 15969
| |||||| ||||||||||| | ||| | | ||||||| || ||||| |||||
Sbjct 68 CTACCGCGCGCCCTGGGGCGCGCACAAACGCGG---CCGCACTGGGCGCACCACCGTCGA 124
Query 15970 TGATGTGATCGACCAGGTGGTCGCCGATGCTCGTAATTATACTCCTACTGCGCCTACA-- 16027
||| | || ||| |||||| | || || || || || || || || |||| ||
Sbjct 125 TGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCACCAGT 184
Query 16028 -TCTACTGTGGATGCAGTTATTGACAGTGTGGTG-GCAGACGCCCGCGCCTATGCTCGCC 16085
|| || ||||| || | ||| | | |||||| || || || ||| ||||||
Sbjct 185 GTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGT-TATGCTAAAA 243
Query 16086 GGAAGAGCCGAAGGAGGCGCATCGCCAGGCGCCACAG----------GGCTACTCCCGCC 16135
|||||| || |||||||| | || | |||||| | ||| ||| |||||
Sbjct 244 TGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGC-ACTGCCGCC 302
Query 16136 ATGCGAGCTGCAAAAGCTATTCT-----GCGGAGGGCCAAACGTGTG--GGGCGAAGAGC 16188
|| || || || | || ||| | | | | || | ||||| ||
Sbjct 303 CAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCG----GC 358
Query 16189 CATGCTTAGAGCGGCCAGACG------CGCGGCT----TCAG-GTGCCAGCAGCGGCAGG 16237
||||| | || || || | ||||| | ||| ||||| | ||||
Sbjct 359 CATGC---GGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCC-----CAGG 410
Query 16238 TCCCGCAGGCGCGCGGCCACGGCGGCAGCAGCGGCCATTGCCAACATGGCCCAACCGCGA 16297
||| | | || |||||| | || ||||| ||||||||| ||| | || ||
Sbjct 411 TCCAGGCGACGAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGC 470
Query 16298 AGAGGCAATGTGTACTGGGTGCGTGATGCCACTACCGGCCAGCGCGTGCCCGTGCGCACT 16357
|| ||||| |||||||||||||| || | ||||| ||||||||||||||||||
Sbjct 471 AGGGGCAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACC 530
Query 16358 CGCCCCCCTCGCACTTAGA--------AGATACTGAGCAGTCTCCGA-TGTTGTGTC--- 16405
|||||||| |||| |||| | | ||| || ||| | |||||| |
Sbjct 531 CGCCCCCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTAT 590
Query 16406 CCAGCGGC--------------AAG-TATGTCCAAGCGCAAATACAAGGAAGAGATGCTC 16450
|||||||| ||| |||||||||||||||| ||| ||||||||||||
Sbjct 591 CCAGCGGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTC 650
Query 16451 CAGGTCATCGCGCCTGAAATCTACGGTCCACCGGTGAAGG------ATGaaaaaaaGCCC 16504
|||||||||||||| || ||||| || || ||| ||||| | || | ||||||
Sbjct 651 CAGGTCATCGCGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCC 710
Query 16505 CGCAAAATCAAGCGGGTCAAAA--ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGC-TG 16561
|| || | ||||||||||||| | | | |
Sbjct 711 CGAAAGCTAAAGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAG 770
Query 16562 GTGGAGTTTGTGCGCGAGTTCGCCCCAAGACGGCGCGTGCAGTGGCGCGGGCGCAAAGTG 16621
||||| | ||| || ||| || || ||||| || |||||| || || ||
Sbjct 771 GTGGAACTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTA 830
Query 16622 CGTCAAGTGCTCAGACCCGGGACCACTGTGGTTTTTACACCCGGCGAGCGTTCCAGCACT 16681
| | || | ||||||| ||||| || |||||||| ||||| ||||| |||| |
Sbjct 831 AGACGTGTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGC 890
Query 16682 ACTTTTAAACGGTCCTATGATGAGGTGTACGGGGATGACAATATTCTTGAGCAGGCGGCA 16741
|| | || || ||||||||||||||||| || || | | |||||||||||
Sbjct 891 ACCTACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAAC 950
Query 16742 GACCGCCTTGACGAGTTTGCTTATGGCAAGCG 16773
|| ||||| | |||||||| || || |||||
Sbjct 951 GAGCGCCTCGGGGAGTTTGCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113517391088808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |