Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000019.1
Length=34794
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 241 3e-59
>seq3063
Length=7092
Score = 241 bits (266), Expect = 3e-59
Identities = 304/416 (73%), Gaps = 4/416 (1%)
Strand=Plus/Plus
Query 11085 GCTTACGAGCAGACAGTAAAGGAAGAGCGTAACTTCCAAAAGTCTTTTAATAATCATGTG 11144
|| ||||||||||| || || | ||| |||||| ||||| ||||| || || |||
Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738
Query 11145 CGAACCCTGATTGCCCGCGAAGAAGTTACCCTTGGTTTGATGCATTTGTGGGATTTGATG 11204
|| || || | || ||||| || || | | || |||||||| ||||||| || ||
Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTT--TG 6796
Query 11205 GAAGCTATCATT--CAGAACCCTACTAGCAAACCTCTGACCGCCCAGCTGTTTCTGGTGG 11262
|||| | || ||||| | |||||| || || | || |||||||| || | |
Sbjct 6797 TAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAG 6856
Query 11263 TGCAACACAGCAGAGACAATGAGGCTTTCAGAGAGGCGCTGCTGAACATCACCGAACCCG 11322
|||| |||||||| ||||| ||||| ||||| || |||||||| ||||| || ||||
Sbjct 6857 TGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 6916
Query 11323 AGGGGAGATGGTTGTATGATCTTATCAACATTCTACAGAGTATCATAGTGCAGGAGCGGA 11382
|||| | ||| || ||| | || |||||||| ||||| || | ||||||||||| |
Sbjct 6917 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCA 6976
Query 11383 GCCTGGGCCTGGCCGAGAAGGTAGCTGCCATCAATTACTCGGTTTTGAGCTTGGGAAAAT 11442
|| || ||||||| || ||||| || ||||| || || || | | || |||| || |
Sbjct 6977 GCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGT 7036
Query 11443 ATTACGCTCGCAAAATCTACAAGACTCCATACGTTCCCATAGACAAGGAGGTGAAG 11498
|||||| ||||| || ||| | || || ||||||||||||||||||||||| |||
Sbjct 7037 TTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 161 bits (178), Expect = 2e-35
Identities = 633/987 (64%), Gaps = 65/987 (7%)
Strand=Plus/Plus
Query 15436 CCAAGCAAGATGTACGGAGGCGCACGCAAACGTTCTACCCAACATCCCGTGCGTGTTCGC 15495
||||||||||||| || || ||| || || || |||||| || ||||| || |||
Sbjct 3 CCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGC 62
Query 15496 GGACATTTTCGCGCTCCATGGGGTGCCCTCAA---GGGCCGCACTCGCGTTCGAACCACC 15552
|| || | ||||| || ||||| || | ||| ||||||||| | || ||||||
Sbjct 63 GGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACT---GGGCGCACCACC 119
Query 15553 GTCGATGATGTAATCGATCAGGTGGTTGCCGACGCCCGTAATTATACTCCTACTGCGCCT 15612
|||||||| | || || |||||| | || || || || || || || || ||||
Sbjct 120 GTCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCA 179
Query 15613 ACA---TCTACTGTGGATGCAGTTATTGACAGTGTAGTG-GCTGACGCTCGCAACTATGC 15668
|| || || ||||| || | ||| | | || ||| || || || || |||||
Sbjct 180 CCAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGA-GCCCGGCGTTATGC 238
Query 15669 TCGACGTAAGAGCCGGCGAAGGCGCATTGCCAGACGCCA------CCGAGCTACCACT-- 15720
| | ||||| ||||| |||||| | || | ||||| |||| | ||||
Sbjct 239 TAAAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGC 298
Query 15721 -GCCATGCGAGCCGCAAGAGCTCTGCTACGAAGAGCTAGACGCGTGGGGCGAAG---AGC 15776
||| || || || || ||||| | || | ||| || ||| | ||
Sbjct 299 CGCCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGC 358
Query 15777 CATGCTTAGGGCGGCCAGACGTGCAGCTTCGGG---CGCCAGCG---CCGGCAGGTCCCG 15830
||||| |||| || || | || |||| | || | || ||||||| |
Sbjct 359 CATGC---GGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAG 415
Query 15831 CAGGCAAGCAGCCGCTGTCGCAGCGGCGACTATTGCCGACATGGCCCAATCGCGAAGAGG 15890
| | ||| ||||| | ||||| ||| | ||| | ||| | || || || ||
Sbjct 416 GCGACGAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGG 475
Query 15891 CAATGTATACTGGGTGCGTGACGCTGCCACCGGTCAACGTGTACCCGTGCGCACCCGTCC 15950
||| || ||||||||||| ||| | | ||| | || || |||||||||||||| ||
Sbjct 476 CAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCC 535
Query 15951 CCCTCGC-ACT-------TAGAAGATACTGAGCAGTCTCCGA-TGTTGTGT---CCCAGC 15998
||| ||| ||| |||| | ||| || ||| | |||||| | |||||
Sbjct 536 CCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGC 595
Query 15999 GGCG--------------AG-GATGTCCAAGCGCAAATACAAGGAAGAAATGCTGCAGGT 16043
|||| || ||||||||||||||| ||| ||||| ||||| |||||
Sbjct 596 GGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGT 655
Query 16044 TATCGCACCTGAAGTCTACGGCCAACCGTTGAAGG------ATGaaaaaaaaccccgcaa 16097
||||| || || |||| |||| ||| ||||| | || | || ||||| ||
Sbjct 656 CATCGCGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAA 715
Query 16098 aatcaagcgggttaaaaaggacaaaaaaGAAGAGGAAGATGGCGATGATGGGCTGGCGGA 16157
| |||||||| |||||| | || ||||| || || |||| ||| | || |||
Sbjct 716 GCTAAAGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAGGTGGA 775
Query 16158 GTTTGTGCGCGAGTTTGCCCCACGGCGACGCGTGCAATGGCGTGGGCGCAAAGTTCGACA 16217
| ||| || || || |||| || || || ||| || || || |||
Sbjct 776 ACTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACG 835
Query 16218 TGTGTTGAGACCTGGAACTTCGGTGGTCTTTACACCCGGCGAGCGTTCAAGCGCTACTTT 16277
||| ||| |||| || || | || || ||||| ||||| ||||| || | | || |
Sbjct 836 TGTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTA 895
Query 16278 TAAGCGTTCCTATGATGAGGTGTACGGGGATGATGATATTCTTGAGCAGGCGGCTGACCG 16337
||||| ||||||||||||||||| || || || | ||||||||||| || ||
Sbjct 896 CAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCG 955
Query 16338 ATTAGGCGAGTTTGCTTATGGCAAGCG 16364
| || |||||||| || || |||||
Sbjct 956 CCTCGGGGAGTTTGCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111213508983048
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