Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000020.1
Length=31323
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 165 2e-36
>seq3063
Length=7092
Score = 165 bits (182), Expect = 2e-36
Identities = 245/345 (71%), Gaps = 2/345 (1%)
Strand=Plus/Plus
Query 10156 GTCACGGCCTATGAGCATACTGTGAAGGCAGAGGTTAATTTTCAGACCACCTTTAACAAC 10215
|| || || || ||||| || ||||| ||| |||| ||||| | | ||||||||||
Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732
Query 10216 AATGTGCGTACCCTCATCGCCAGGGAAGAGGTGGTCATTGGCCTGATGCACTTGTGGGAC 10275
| ||||| || || | || | || ||||||| || || |||||||| ||||||||
Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792
Query 10276 TTTGTGGAGGCCTTTCTAG-AAAACCCAGTGAGCAAGGCCCTCACTGCCCAGCTCTTTCT 10334
||||| || | | || |||||||| |||||| | |||| || ||||| || ||
Sbjct 6793 TTTGTA-AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 10335 TATAGTGCAACACTGCAGGGACGAGGGGGTGCTGCGGGAAAGCTTGCTAAACATTGCCGA 10394
||||||||| ||| |||||||| | | || | |||| |||||||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 10395 GCCTGAGAGCCGGTGGCTGGTGGACCTGTTAAACCTGTTACAGACTATTGTGGTGCAAGA 10454
||| ||| |||| |||||| | || || ||||| | | |||| || |||||||| ||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 10455 GCGAGGCTTGGCAGTTGGTGAAAAGGTAGCGGCTATAAACTACTC 10499
||| ||||| | | ||| ||||| || || || ||||| ||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTC 7016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100106877331530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |