Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AC_000020.1 Length=31323 Score E Sequences producing significant alignments: (Bits) Value seq3063 165 2e-36 >seq3063 Length=7092 Score = 165 bits (182), Expect = 2e-36 Identities = 245/345 (71%), Gaps = 2/345 (1%) Strand=Plus/Plus Query 10156 GTCACGGCCTATGAGCATACTGTGAAGGCAGAGGTTAATTTTCAGACCACCTTTAACAAC 10215 || || || || ||||| || ||||| ||| |||| ||||| | | |||||||||| Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732 Query 10216 AATGTGCGTACCCTCATCGCCAGGGAAGAGGTGGTCATTGGCCTGATGCACTTGTGGGAC 10275 | ||||| || || | || | || ||||||| || || |||||||| |||||||| Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792 Query 10276 TTTGTGGAGGCCTTTCTAG-AAAACCCAGTGAGCAAGGCCCTCACTGCCCAGCTCTTTCT 10334 ||||| || | | || |||||||| |||||| | |||| || ||||| || || Sbjct 6793 TTTGTA-AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851 Query 10335 TATAGTGCAACACTGCAGGGACGAGGGGGTGCTGCGGGAAAGCTTGCTAAACATTGCCGA 10394 ||||||||| ||| |||||||| | | || | |||| |||||||||| | || Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911 Query 10395 GCCTGAGAGCCGGTGGCTGGTGGACCTGTTAAACCTGTTACAGACTATTGTGGTGCAAGA 10454 ||| ||| |||| |||||| | || || ||||| | | |||| || |||||||| || Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971 Query 10455 GCGAGGCTTGGCAGTTGGTGAAAAGGTAGCGGCTATAAACTACTC 10499 ||| ||||| | | ||| ||||| || || || ||||| || Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTC 7016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100106877331530