Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq3063 201 2e-47 >seq3063 Length=7092 Score = 201 bits (222), Expect = 2e-47 Identities = 275/379 (73%), Gaps = 10/379 (3%) Strand=Plus/Plus Query 11001 GCCTACGAGCAGACGGTACGCGAGGAGGTCAACTTCCAAAAGACCTTCAACAACAACGTG 11060 || |||||||||||||| | ||||| | ||||| ||||| | ||| |||||| ||||| Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738 Query 11061 CGCACCCTGGTGAGCCGGGACGAGGTGACCATGGGACTGATGCACCTGTGGGACTTTGTG 11120 ||||| || ||| || || |||||| | || ||||||||||| |||||||||||||| Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTTGTA 6798 Query 11121 GAGGCCTTCCTGCAGCAC--CCCCGGTCCCGCGC-GCTGACCGCGCAGCTGCTGCTGATC 11177 || ||| |||| ||| | | || ||| | ||||||||| | || || Sbjct 6799 AGCGCG---CTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 6855 Query 11178 GCGCAGCACTGCCGGGACGAGG--GCATGGTGAAGGAGGCGCTGCTGAGCCTGGGCGCGC 11235 | ||||||| || ||||| | | |||| | | ||| |||||||| | | | | | || Sbjct 6856 GTGCAGCACAGCAGGGACAACGAGGCAT--TCAGGGATGCGCTGCTAAACATAGTAGAGC 6913 Query 11236 CCGAGAGCCGCTGGCTGGTGGACCTGGTGAACCTGCTCCAGACCATTGTGGTGCAGGAGC 11295 ||||| ||||||||||| | || || | ||| | || |||| ||| ||||||||||||| Sbjct 6914 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 6973 Query 11296 GGTCCATGAGCCTGAGCGAGAAGGTGGCGGCCATCAACTACTCGGTGGCGACCCTGGCCA 11355 | | |||||||| || |||||||| ||||| ||||| || || | |||| || Sbjct 6974 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 7033 Query 11356 AGCACTACGCGCGCAAGAT 11374 || ||||| |||||||| Sbjct 7034 AGTTTTACGCCCGCAAGAT 7052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108973623602448