Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AC_000190.1
Length=33501
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 118 2e-22
>seq3063
Length=7092
Score = 118 bits (130), Expect = 2e-22
Identities = 278/418 (67%), Gaps = 4/418 (1%)
Strand=Plus/Plus
Query 9511 ACGGCTTACGAACAGACGGCCAAGGCCGAATCTAGTTTTCAAACGACTTTTAATAACACC 9570
|| || ||||| ||||||| || || || ||||||| | ||||| ||| |
Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735
Query 9571 GTGCGCACGTTAATCTCTCGGGACGAAGTGACGGTGGGGCTGATGCATCTGTGGGATTTT 9630
||||||||| | | | || || || ||| | | || ||||||||||||||||| |||
Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795
Query 9631 GTGGAAGCTTAC--GTGGCCAATCCAGGCAGTAAGGCGTTGACGGCGCAGTTGTTTTTGA 9688
|| |||| | | | || ||| || ||| || | | ||||||| |||| | |
Sbjct 6796 GT--AAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTA 6853
Query 9689 TTGTGCAGCATTCTCGCGACGAGGGGATGTTTAAAGAGTCTCTGTTGAGCATTTCAGAGC 9748
| |||||||| | ||| | | | || | || | ||| | | ||| |||||
Sbjct 6854 TAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 6913
Query 9749 CGGAGGGGCGTTGGTTGTTGGACTTGATTAACATTTTGCAGACTATTATCGTGCAAGAGC 9808
| ||||| || ||| || | || ||||| |||||| |||||| || | ||||| ||||
Sbjct 6914 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 6973
Query 9809 GGGGACTGAGTGTGGCGGAGAAAGTGGCGGCGATTAACTACTCGGTGATCACGCTGGGAA 9868
| | |||| |||| || || ||||| || |||||||| || || ||| ||||| |
Sbjct 6974 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 7033
Query 9869 AGCACTATGCTAGAAAAATTTTTAAGAGTCCTTTTGTGCCCATCGATAAAGAGGTTAA 9926
|| || || | || || | | | |||| || ||||| || || ||||| ||
Sbjct 7034 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107076120701454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |