Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AC_000190.1 Length=33501 Score E Sequences producing significant alignments: (Bits) Value seq3063 118 2e-22 >seq3063 Length=7092 Score = 118 bits (130), Expect = 2e-22 Identities = 278/418 (67%), Gaps = 4/418 (1%) Strand=Plus/Plus Query 9511 ACGGCTTACGAACAGACGGCCAAGGCCGAATCTAGTTTTCAAACGACTTTTAATAACACC 9570 || || ||||| ||||||| || || || ||||||| | ||||| ||| | Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 9571 GTGCGCACGTTAATCTCTCGGGACGAAGTGACGGTGGGGCTGATGCATCTGTGGGATTTT 9630 ||||||||| | | | || || || ||| | | || ||||||||||||||||| ||| Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795 Query 9631 GTGGAAGCTTAC--GTGGCCAATCCAGGCAGTAAGGCGTTGACGGCGCAGTTGTTTTTGA 9688 || |||| | | | || ||| || ||| || | | ||||||| |||| | | Sbjct 6796 GT--AAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTA 6853 Query 9689 TTGTGCAGCATTCTCGCGACGAGGGGATGTTTAAAGAGTCTCTGTTGAGCATTTCAGAGC 9748 | |||||||| | ||| | | | || | || | ||| | | ||| ||||| Sbjct 6854 TAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGC 6913 Query 9749 CGGAGGGGCGTTGGTTGTTGGACTTGATTAACATTTTGCAGACTATTATCGTGCAAGAGC 9808 | ||||| || ||| || | || ||||| |||||| |||||| || | ||||| |||| Sbjct 6914 CCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC 6973 Query 9809 GGGGACTGAGTGTGGCGGAGAAAGTGGCGGCGATTAACTACTCGGTGATCACGCTGGGAA 9868 | | |||| |||| || || ||||| || |||||||| || || ||| ||||| | Sbjct 6974 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 7033 Query 9869 AGCACTATGCTAGAAAAATTTTTAAGAGTCCTTTTGTGCCCATCGATAAAGAGGTTAA 9926 || || || | || || | | | |||| || ||||| || || ||||| || Sbjct 7034 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107076120701454