Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AC_000191.1 Length=34185 Score E Sequences producing significant alignments: (Bits) Value seq3063 147 5e-31 >seq3063 Length=7092 Score = 147 bits (162), Expect = 5e-31 Identities = 289/423 (68%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 10769 ACCGCCTATCAGCAAACTGTCAGAGAGGAGGTCAACTTCCAAAAGACATTTAATAATAAT 10828 ||||| || |||| || || | ||||| | ||||| ||||| | ||||| || | Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 10829 GTTCGAACACTGGTGGCCAGGGAAGAAGTGGCAGTGGGGCTCATGCATTTGTGGGACTTT 10888 || || || || ||||| | || || ||||| | || || |||||| ||||||||||| Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795 Query 10889 GTTGAGGCGTACGTTGTA----AATCCATCTTCCAAAGCTTTAACTGCCCAGCTATTTCT 10944 || | ||| || || | || ||| | ||| | | | || ||||| || || Sbjct 6796 GT--AAGCG--CGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851 Query 10945 TATTGTCCAACACTGCCGCGACGA--AGGCATTCTAAAGGAATCGCTGTTGAACATTGCA 11002 ||| || || ||| || | ||| | |||||||| | ||| ||||| | ||||| | | Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTC--AGGGATGCGCTGCTAAACATAGTA 6909 Query 11003 GAGCCAGAGAGCAGGTGGCTGTTAGATCTAATAAATCTGCTCCAAACGATAGTGGTTCAA 11062 ||||| ||| || | |||||| | ||| | ||||| | || || | |||||||| || Sbjct 6910 GAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAG 6969 Query 11063 GAACGGGGCATGTCCATTACAGAAAAGGTGGCCGCCATTAACTATTCTGTAATAACTCTC 11122 || || || || | | | || ||||||||||||||||||||||| | | | ||| Sbjct 6970 GAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTG 7029 Query 11123 AGCAAGCATTATGCCAGGAAAGTTTATAGGACTCCGTTTGTCCCCATTGACAAGGAAGCA 11182 ||||| ||| ||| | || | || || || | || ||||| |||||||| | | Sbjct 7030 GGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTA 7089 Query 11183 AAG 11185 ||| Sbjct 7090 AAG 7092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109264808701926