Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3454 91.5 1e-13 >seq3454 Length=79874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 101745 CTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATG 101804 ||| || ||| | |||||||||||| || || |||| ||| ||||| ||||| || | Sbjct 75975 CTAAATCAGTTATATGAGCAATCATATGTGTCAATAGAGCATAACTAGCTATGTTGAAAG 76034 Query 101805 GCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCAC 101864 | | || | |||||||| || |||||| |||| ||| |||||||||||| | Sbjct 76035 GAATACCAAGACCCATATCTGCGCTTCTTTGGTACATCATACAAGAAAGCTTTCCACTAG 76094 Query 101865 AGACATAAAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAA 101923 | |||| ||| || ||| || | ||||| || || | ||||||| | ||||| Sbjct 76095 ATACATGAAACTGTACTAAACA-GTGACATGGAGGAAGTGCCATTTTGCTTAAATCTGAG 76153 Query 101924 ACATTCCAAGCACACATTAACATCCTTCTATC 101955 |||||| || || | ||||||||||| || Sbjct 76154 GGATTCCATGCGCATACCAACATCCTTCTGTC 76185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361232228554559