Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_001454.1
Length=34214
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 392 7e-105
>seq3063
Length=7092
Score = 392 bits (434), Expect = 7e-105
Identities = 339/420 (81%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 10676 GGTAACCGCGTACGAGCAAACGGTGAACGAGGAGCGCAACTTTCAGAAAAGTTTTAACAA 10735
||| |||||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 10736 TCACGTGCGCACCCTGGTGGCGCGCGAGGAGGTGGCCATTGGGCTGATGCATTTGTGGGA 10795
||||||||||| || |||||||||||||||||||| || || ||||||||| |||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 10796 CTTTATGGAGGCGTACGTGCAAAATCCTTCGAGCAAGCCGCTGACGGCGCAGCTGTTTTT 10855
|||| | ||| | |||||| || ||||||||||| | |||||||||||| |
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 10856 GATTGTGCAACACAGCCGGGACAACGAGGCTTTCCGCGAGGCCATGCTGAATATTGCGGA 10915
|| ||||| |||||| ||||||||||||| ||| | || || |||| || || | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 10916 GCCTGAGGGTCGCTGGCTTTTGGACCTGGTTAATATCCTTCAGAGCATTGTGGTACAGGA 10975
||| ||||| |||||||| | || || | || || || |||||||| ||||| |||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 10976 GCGCAGTCTAAGCCTGGCCGACAAGGTGGCGGCCATTAATTACAGCATGCTTAGCCTCGG 11035
|||||| | |||||||| ||||||||||| |||||||| || |||||| || || ||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11036 CAAGTTTTACGCCCGCAAGATTTACAAAACCCCCTATGTGCCCATAGACAAGGAGGTTAA 11095
||||||||||||||||||||| ||| | ||||| || || ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Score = 125 bits (138), Expect = 2e-24
Identities = 255/376 (68%), Gaps = 17/376 (5%)
Strand=Plus/Plus
Query 15385 CAAGCGCAAGTTCAAAGAAGAGCTGCTGGAGGCCCTTGTGCCTGAAATCTATGGCCCTGC 15444
||||||||| ||||||||||| |||| ||| | | | ||| || ||||||||||| |
Sbjct 623 CAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCGCGCCGGAGATCTATGGCCCC-C 681
Query 15445 CGCGGACGTCA-AGCCCGACATTAAGCCTCGCGTGCTCAAGCGGGTTAAAAAGCGAGaaa 15503
|| || | | ||| || ||||| || ||| |||||||| |||||| |||
Sbjct 682 CGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAAAGCGGGTCAAAAAGA---AAA 738
Query 15504 aaaaaGAGGAAAAGGAGGAAGCAGGGTTGCTAGACGACGGTGTTGAGTTTGTGCGGTCCT 15563
| ||||| || | || ||| || ||||||| || || | ||| |
Sbjct 739 AGAAAGATGATGATGATGAA---------CTTGACGACGAGGTGGAACTGCTGCACGCAA 789
Query 15564 TTGCCCCCCGGCGGCGGGTGCAGTGGCGGGGACGTAAAGTCCAGCGCGTGCTTAGACCCG 15623
|| ||| |||||||||| |||||| || || || || || | ||||||
Sbjct 790 CCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCG 849
Query 15624 GCACTACTGTAGTATTTACTCCCGGAGAGCGGTCCGTCACGCGGGCCTTAAAACGGGATT 15683
|||| || ||||| ||||| ||||| ||||| ||| || || ||| || || | |
Sbjct 850 GCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCC---ACCCGCACCTACAAGCGCGTGT 906
Query 15684 ACGATGAGGTTTACGCTGACGAAGACATTCTTGAGCAGGCCGCCCAACAGGTTGGGGAAT 15743
| |||||||| |||| ||||| ||| | |||||||||||| | | | | ||||| |
Sbjct 907 ATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGT 966
Query 15744 TCGCCTACGGCAAGCG 15759
| |||||||| |||||
Sbjct 967 TTGCCTACGGAAAGCG 982
Score = 84.2 bits (92), Expect = 5e-12
Identities = 115/160 (72%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 14814 ATGTACGGCGGCGCCAAACGGCGTTCTAGCCAACACCCTGTTCGCGTGCGCGGACATTAC 14873
|||| ||||| || || ||| || ||||||||| || ||||||||||| || |||
Sbjct 12 ATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCACTAC 71
Query 14874 CGCGCCCCCTGGGGGGCTTACACCCGCGGTGTTATCTCAAGACGTACCACCGTTGATGAC 14933
||||| |||||||| || ||| ||||| | | | || |||||||| ||||||
Sbjct 72 CGCGCGCCCTGGGGCGCGCACAAACGCGG---CCGCACTGGGCGCACCACCGTCGATGAC 128
Query 14934 GTCATTGACTCCGTGGTAGCCGATGCCCAACGCTACACGC 14973
| ||||||| | ||||| | || || | ||||||||
Sbjct 129 GCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGC 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 109357603953408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |