Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_001876.1
Length=34446
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 179 8e-41
>seq3063
Length=7092
Score = 179 bits (198), Expect = 8e-41
Identities = 295/419 (70%), Gaps = 10/419 (2%)
Strand=Plus/Plus
Query 10396 GCTTACGAGCAAACGGTGAAGCAAGAGGCTAATTTTCAAAAGTCATTTAATAACCACGTG 10455
|| |||||||| |||||||| || ||| ||| |||||||| ||||| |||||||||
Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738
Query 10456 CGGACACTGATCTCCCGCGAGGAGACCACCCTGGGTTTGATGCACTTGTGGGACTTTGCG 10515
|| || || | | ||||||||| | | || ||||||| ||||||||||||
Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTTGTA 6798
Query 10516 GAGGCATACGCGCAGAACCCCGGCAGCAAGACCCTTACGGCCCAAGTCTTTCTCATCGTG 10575
|| | ||| ||||| |||||| | || | ||| || | || || || |||
Sbjct 6799 AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGTG 6858
Query 10576 CAGCACTTGCAAG----ATGAGGGCATTTTTGGGGAAGCTTTCTTAAGCATAGCAGAGCC 10631
|||||| ||| | | || |||| || |||| || | ||| ||||| ||||||
Sbjct 6859 CAGCAC-AGCAGGGACAACGA-GGCA--TTCAGGGATGCGCTGCTAAACATAGTAGAGCC 6914
Query 10632 CGAGGGACGATGGATGCTAGATCTGCTAAACATATTGCAGTCCATTGTGGTGCAAGAGCG 10691
|||||| || ||| |||| ||| || ||||||| ||||| ||| |||||||| |||||
Sbjct 6915 CGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCG 6974
Query 10692 CCAGCTTTCG-CTATCTGAAAAGGTAGCCGCGGTGAACTACTCCGTAGTTACCCTGGGCA 10750
|||||| | || |||| ||||| ||||| | ||||| ||| | | | |||||||
Sbjct 6975 -CAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 7033
Query 10751 AACATTATGCCCGCAAGATCTTTAAGAGCCCCTTTGTGCCGCTTGACAAGGAGGTGAAG 10809
| ||| ||||||||||| | | | ||| | || || | ||||||||||| |||
Sbjct 7034 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 87.8 bits (96), Expect = 4e-13
Identities = 126/177 (71%), Gaps = 3/177 (2%)
Strand=Plus/Plus
Query 15329 CAGTGGAAGGGCAGGCGGGTGCGCCGGGTTTTGCGTCCCGGCGTGGCCGTTAGTTTCACG 15388
|||||||| || | || || | || |||||||| |||||| |||| ||| |||
Sbjct 810 CAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGCACCACCGTAGTTTTTACG 869
Query 15389 CCCGGCGCGCGCTCCCTCCGTCCGAGTTCCAAGCGGGTGTATGACGAGGTGTACGCAGAC 15448
||||| | ||||||| ||| | | |||||| |||||||| |||||||||| |||
Sbjct 870 CCCGGTGAGCGCTCCACCCGCACC---TACAAGCGCGTGTATGATGAGGTGTACGGCGAC 926
Query 15449 GACGACTTCTTAGAAGCGGCCGCGGCCCGTGAGGGGGAGTTTGCTTACGGAAAGCGG 15505
|| ||| | | || |||| | || ||||||||||| ||||||||||||
Sbjct 927 GAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTACGGAAAGCGG 983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 110099965965264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |