Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3454 125 5e-24 >seq3454 Length=79874 Score = 125 bits (138), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 97109 CTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAG 97168 |||||||||| | ||| || |||||| || ||||||| ||| ||||| ||||| |||| Sbjct 75975 CTAAATCAGTTATATGAGCAATCATATGTGTCAATAGAGCATAACTAGCTATGTTGAAAG 76034 Query 97169 GCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCAC 97228 | | || || |||||||| || |||||| || | | ||| |||||||||||| | Sbjct 76035 GAATACCAAGACCCATATCTGCGCTTCTTTGGTACATCATACAAGAAAGCTTTCCACTAG 76094 Query 97229 ACACATAAAACTG-ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAG 97287 | |||| |||||| ||| || | ||||| || || | |||||||| | |||| || Sbjct 76095 ATACATGAAACTGTACTAAACA-GTGACATGGAGGAAGTGCCATTTTGCTTAAATCTGAG 76153 Query 97288 ACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| || || | |||||| ||||| || |||| || Sbjct 76154 GGATTCCATGCGCATACCAACATCCTTCTGTCACTTGGATT 76194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346765788313130