Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3463 246 3e-60 seq2787 122 1e-22 seq3441 116 4e-21 seq2916 116 4e-21 seq2566 114 1e-20 seq905 113 5e-20 seq2649 109 6e-19 seq2630 109 6e-19 seq1590 109 6e-19 seq3499 107 2e-18 seq2201 107 2e-18 seq1367 107 2e-18 seq835 107 2e-18 seq462 107 2e-18 seq2288 104 3e-17 seq1517 104 3e-17 seq1176 102 9e-17 seq4044 100 3e-16 seq1915 100 3e-16 seq2666 98.7 1e-15 seq1326 98.7 1e-15 seq3467 96.9 4e-15 seq2205 96.9 4e-15 seq1305 96.9 4e-15 seq3424 91.5 2e-13 >seq3463 Length=282612 Score = 246 bits (272), Expect = 3e-60 Identities = 649/987 (66%), Gaps = 33/987 (3%) Strand=Plus/Minus Query 96454 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 96513 ||||| ||| || || || ||||||||||| || || | | || || |||| ||| Sbjct 183021 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 182962 Query 96514 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGC 96573 | || || || ||||| || ||| | | ||||| ||||| || |||||||| || Sbjct 182961 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGT 182902 Query 96574 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 96633 ||||| ||||| || ||| ||||| || | ||| ||| | || |||| || Sbjct 182901 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 182842 Query 96634 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 96693 ||| |||| | || || ||||| || |||||||| | | || |||||||| Sbjct 182841 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 182782 Query 96694 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 96753 || |||||||| | || || || || |||||| ||||| |||||||| | ||| Sbjct 182781 CCACAAAAAGGATTGTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAATG 182722 Query 96754 GCTATTCGCAAACATAA-----CCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGA 96808 || | || | || |||| | || || ||| | || || ||||| |||| Sbjct 182721 -----TCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 182667 Query 96809 CACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACT 96868 | || ||| ||||||| ||||| | ||| | | ||| ||| | ||||||| | | Sbjct 182666 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 182607 Query 96869 CGGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGT 96928 | || || || | | | ||||| || |||||||| || || ||||| ||||||| Sbjct 182606 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 182547 Query 96929 TTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACAT 96988 | || || || || ||||| ||||| ||| | || | || | | ||||| | | Sbjct 182546 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGG-TAGCCCA--GAAGATGGTGATTGTT 182490 Query 96989 ATGTAACACTATTGAAAGAACTACGCCTAATGCTAGAC-------AAACTGGGTGTGGTG 97041 |||||| | |||||||| |||| ||||| ||| | || | |||| Sbjct 182489 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGACGAGCTCTCAGCTAAGAATGGT- 182431 Query 97042 AACAAACGCGTGTACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTG 97101 || ||| ||||| || || || | | || || | |||||||| | || Sbjct 182430 AAGAAA------TACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTT 182377 Query 97102 ATAGATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTC 97161 |||| || |||| | ||| |||||||| | || || ||||||||||||||| Sbjct 182376 GTAGACTATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTC 182317 Query 97162 AAAGGCGCATGGTCCA---ACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCG 97218 || || || ||||| | |||| | | || |||||||| ||||||||||| || || Sbjct 182316 AAGGGAGCCTGGTCAAATGACAC---TCTTGGACATCAAACGCCATTGTACGCGCCAGCG 182260 Query 97219 TGGAACCCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAA 97278 ||||| || | || | |||||| |||||| | |||||| | |||| ||| | Sbjct 182259 TGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGA 182200 Query 97279 GTACCTTCCAACAAAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTG 97338 || | | || || |||||||| || || || ||||| || | || |||| ||| || Sbjct 182199 GTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTT 182140 Query 97339 CACGATTACAAGAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACA 97398 || |||||||| |||| | || || ||| ||| || || || || ||||| || Sbjct 182139 CATGATTACAAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACT 182080 Query 97399 TGGGAAAACGGTGTCGTCGATTATAGG 97425 ||| || |||| || || || |||||| Sbjct 182079 TGGCAAGACGGAGTGGTTGACTATAGG 182053 >seq2787 Length=76071 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| |||||| || || || ||||| ||| ||| || ||||||||||| |||| Sbjct 41329 CCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAA 41270 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| | || || |||||||| |||||||| ||||| || || || || | || Sbjct 41269 AGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 41210 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||| ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 41209 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 41150 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| ||||| || || || |||||||||||||| ||||| Sbjct 41149 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||| || | || || ||||||||||| || |||| ||||| || | Sbjct 39722 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCC 39663 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | ||||| |||||||| || | || || || || | || | || ||||| Sbjct 39662 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 39603 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 || | ||| |||| | ||| | | | | || ||| | ||| || || | || | Sbjct 39602 GT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 39544 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||||||| ||||| || || || |||||||| |||||||| Sbjct 39543 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| || |||| || ||| || |||||||||||||||| || ||| || | Sbjct 40862 ACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACC 40803 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||| ||||| || ||||| || || ||||| | || | || |||||| Sbjct 40802 ATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTT 40743 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||||| ||||| || | | ||||| | ||| || || | || || Sbjct 40742 ATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAAT 40683 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || | || || ||||| |||||||| Sbjct 40682 GGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| || ||||| | || |||||||||||||| ||||||| | || || | Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || ||||| || || ||||| || || || | ||| || || | || | | ||| ||| Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 || ||| ||| || | | | | |||||| || || || || | |||||| Sbjct 39829 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 39770 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||| || || || ||||| |||||||| |||||| Sbjct 39769 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734 >seq3441 Length=658075 Score = 116 bits (128), Expect = 4e-21 Identities = 111/137 (81%), Gaps = 9/137 (7%) Strand=Plus/Plus Query 60028 AATCAGATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACC 60087 |||||||||| | |||||| || ||||| | |||| |||| |||||||||||| Sbjct 269669 AATCAGATAATGA--AATTAAA---TACAAAAAAAT--CTCCCCGGCGGGGAATCGAACC 269721 Query 60088 CTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGAATATAT 60147 | ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | Sbjct 269722 CCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGATTGCATACAA 269781 Query 60148 AACT-TGAATATTACAA 60163 || | |||| |||| || Sbjct 269782 AATTGTGAA-ATTATAA 269797 >seq2916 Length=227238 Score = 116 bits (128), Expect = 4e-21 Identities = 75/82 (91%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 155456 AAAATGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 155397 Query 60118 CACCACTATACTACCGAGGATT 60139 ||||||||||||||||||||| Sbjct 155396 TACCACTATACTACCGAGGATT 155375 >seq2566 Length=974290 Score = 114 bits (126), Expect = 1e-20 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 870431 AAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 870372 Query 60118 CACCACTATACTACCGAGGATTG 60140 |||||||||||||||||||||| Sbjct 870371 TACCACTATACTACCGAGGATTG 870349 >seq905 Length=23872 Score = 113 bits (124), Expect = 5e-20 Identities = 87/101 (86%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 60042 AAATTAACGTTTATGAAAAA--TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGC 60099 ||||||| ||||| ||||| | ||||| |||| ||||||||||||| |||||||||| Sbjct 2023 AAATTAAA-TTTATAAAAAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGC 2081 Query 60100 GTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 60140 ||||||||||| ||||| |||||||||||||||| ||||| Sbjct 2082 GTGACAGGCGGGGATACTTACCACTATACTACCGAAGATTG 2122 >seq2649 Length=242434 Score = 109 bits (120), Expect = 6e-19 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 103081 AAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 103024 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||||||| ||||| Sbjct 103023 TTACCACTATACTACCGAAGATTG 103000 >seq2630 Length=1043321 Score = 109 bits (120), Expect = 6e-19 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 60057 AAAAAT--TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| || Sbjct 95243 AAAAATAGTCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 95184 Query 60115 ACTCACCACTATACTACCGAGGAT 60138 ||| |||||||||||||||||||| Sbjct 95183 ACTTACCACTATACTACCGAGGAT 95160 >seq1590 Length=469570 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 295058 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 295117 Query 60125 ATACTACCGAGGATT 60139 ||||||||||||||| Sbjct 295118 ATACTACCGAGGATT 295132 >seq3499 Length=972244 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| || |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 130544 AAAAGATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 130603 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 130604 TTACCACTATACTACCGAGGAT 130625 >seq2201 Length=540919 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 310217 TCTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 310276 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 310277 ATACTACCGAGGAT 310290 >seq1367 Length=102154 Score = 107 bits (118), Expect = 2e-18 Identities = 96/115 (83%), Gaps = 8/115 (7%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 50780 AAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50721 Query 60117 TCACCACTATACTACCGAGGAT---TGAATATATAACTTGAATATTA-CAATCCT 60167 | |||||||||||||||| ||| |||| ||||| ||||| |||| |||||| Sbjct 50720 TTACCACTATACTACCGAAGATGTATGAA-ATATA--TTGAA-ATTATTAATCCT 50670 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 51300 AAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 51359 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 51360 TTACCACTATACTACCGAAGAT 51381 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 53245 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 53304 Query 60124 TATACTACCGAGGAT 60138 ||||||||||| ||| Sbjct 53305 TATACTACCGAAGAT 53319 >seq835 Length=305099 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 198113 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 198172 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 198173 ATACTACCGAGGAT 198186 >seq462 Length=121246 Score = 107 bits (118), Expect = 2e-18 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 88045 AAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 88104 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||||||| ||||| Sbjct 88105 TTACCACTATACTACCGAAGATTG 88128 >seq2288 Length=132835 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 13724 AAAAGTGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 13665 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||| ||| Sbjct 13664 TTACCACTATACTACCGAAGAT 13643 >seq1517 Length=35327 Score = 104 bits (114), Expect = 3e-17 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 21775 ATAAAAAAGGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 21834 Query 60114 TACTCACCACTATACTACCGAGGATTG 60140 |||| |||||||||||||||| ||||| Sbjct 21835 TACTTACCACTATACTACCGAAGATTG 21861 >seq1176 Length=33059 Score = 102 bits (112), Expect = 9e-17 Identities = 94/116 (81%), Gaps = 6/116 (5%) Strand=Plus/Plus Query 60028 AATCAGATAACAACAAA---TTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGA 60084 ||| | |||| |||||| ||||| | || ||| | ||||| ||| ||||||||| Sbjct 27198 AATTAAATAAAAACAAAAGTTTAACATA-ATAAAAGAAACTCTCC--GGCGGGGAATCGA 27254 Query 60085 ACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 60140 |||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||| Sbjct 27255 ACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAAGATTG 27310 >seq4044 Length=174331 Score = 100 bits (110), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| || ||||||||||||| ||||||||||||||||||||| |||| Sbjct 168645 AAAAAATCTCTCCC--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 168702 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||||||| ||||| Sbjct 168703 TTACCACTATACTACCGAAGATTG 168726 >seq1915 Length=142511 Score = 100 bits (110), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 94653 AAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 94594 Query 60118 CACCACTATACTACCGAGGA-TTGA 60141 |||||||||||||||| || |||| Sbjct 94593 TACCACTATACTACCGAAGACTTGA 94569 >seq2666 Length=173588 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/107 (81%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 60034 ATAACAACAAA--TTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGG 60091 |||| |||||| |||| | || ||| | ||||| ||| ||||||||||||| || Sbjct 101005 ATAAAAACAAAATTTAAACATAATAAAAGAAACTCTCC--GGCGGGGAATCGAACCCCGG 101062 Query 60092 TCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138 ||||||||||||||||||| ||||| |||||||||||||||| ||| Sbjct 101063 TCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAAGAT 101109 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/107 (81%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 60034 ATAACAACAAA--TTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGG 60091 |||| |||||| |||| | || ||| | ||||| ||| ||||||||||||| || Sbjct 106765 ATAAAAACAAAATTTAAACATAATAAAAGAAACTCTCC--GGCGGGGAATCGAACCCCGG 106822 Query 60092 TCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138 ||||||||||||||||||| ||||| |||||||||||||||| ||| Sbjct 106823 TCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAAGAT 106869 >seq1326 Length=586218 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60056 GAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| | ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 400609 GAAAAAATACCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 400550 Query 60116 CTCACCACTATACTACCGAGGA 60137 || |||||||||||||||| || Sbjct 400549 CTGACCACTATACTACCGAAGA 400528 >seq3467 Length=704531 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 7687 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 7628 Query 60131 CCGAGGATTGAATATA 60146 |||| || || | ||| Sbjct 7627 CCGAAGACTGTACATA 7612 >seq2205 Length=65158 Score = 96.9 bits (106), Expect = 4e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 3744 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 3803 Query 60131 CCGAGGAT 60138 |||| ||| Sbjct 3804 CCGAAGAT 3811 Score = 95.1 bits (104), Expect = 1e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 16079 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 16138 Query 60131 CCGAGGATTG 60140 |||| || || Sbjct 16139 CCGAAGACTG 16148 >seq1305 Length=286731 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||| | |||||||||| ||||||||||| ||||| |||| || || || | || || Sbjct 24775 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 24834 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||| || |||||||| || || | || |||||||| | || | | ||||| || Sbjct 24835 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 24894 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| ||| | | | | || ||| | ||||| |||| || |||||||| Sbjct 24895 GATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTT 24954 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||| || ||||| || || ||||||||| Sbjct 24955 ACCCGTAAGGGTCTTGACGAAAATTTGCATT 24985 >seq3424 Length=494560 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||| |||||| || |||||||| || |||||| || ||||| || || | | Sbjct 290433 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 290374 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || || ||||| || ||||| || |||| || || || | || Sbjct 290373 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290314 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 43135 | || ||||| || ||| | |||| | | | | | | || || | |||||| Sbjct 290313 ATGCCTTCCTTATCT-TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 290255 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||| ||||| || || || ||||||||||| ||||||||| Sbjct 290254 CTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 290206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571786800474520