Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_002513.1 Length=33034 Score E Sequences producing significant alignments: (Bits) Value seq3063 179 8e-41 >seq3063 Length=7092 Score = 179 bits (198), Expect = 8e-41 Identities = 288/411 (70%), Gaps = 2/411 (0%) Strand=Plus/Plus Query 9889 ACTGCTTACGAGCAGACAGTTAAAGAAGAAATTAACTTTCAAAAGACATTTAACAACAAC 9948 || || ||||||||||| || || | || |||||||||||||| | ||||||||| || Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 9949 GTGCGGACATTAGTGTCTAGAGAGGAAGTGGCAATAGGGCTCATGCACTTGTGGGACTTT 10008 ||||| || | ||| | | ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 6736 GTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTT 6795 Query 10009 GTGGAAGCTTTTGTGGGCAACCCGTCGTCTAAGGCTCTCACGGCCCAGTTGTTTCTCATA 10068 || || | | | ||||| ||| | |||| ||| ||| |||| || ||| Sbjct 6796 GTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 6855 Query 10069 GTGCAGCACTGCAGGGACGAAGGGGTGCTTAAAGAGTCTTTGCTTAACATTGCTGAGCCC 10128 ||||||||| |||||||| | | || | | || | |||| ||||| | |||||| Sbjct 6856 GTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCC 6915 Query 10129 CCAAGTAAATGGCTGCTTGACCTTATTAACTTGCTGCAGACAATAATCGTGCAGGAGCG- 10187 | |||||||| || | || ||| | ||||||| ||| | ||||||||||| Sbjct 6916 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGC 6975 Query 10188 GGCTATGAGCCTCACTGAAAAAGTAGCGGCCATTAACTACTCAGTTATAACACTCAGCAA 10247 ||| ||||||| |||| || || || ||||||||||| || | | | || |||| Sbjct 6976 AGCT-TGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAA 7034 Query 10248 GTATTACGCCAGGAAGGTTTTTAAGAGCATTTTTGTGCCCATAGACAAAGA 10298 || ||||||| | ||| | | | | | || || ||||||||||| || Sbjct 7035 GTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGA 7085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105581797168968