Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3463 181 8e-41 seq2787 109 4e-19 seq2396 105 5e-18 seq3424 100 2e-16 seq1305 89.7 4e-13 seq3388 84.2 2e-11 >seq3463 Length=282612 Score = 181 bits (200), Expect = 8e-41 Identities = 586/897 (65%), Gaps = 27/897 (3%) Strand=Plus/Plus Query 90990 ATAGTCAACGACTCCATCTTCCCACGTGCCCGTAACCGGACCGTTAGCGACACCA-TCAA 91048 ||||||||| ||||| |||| ||| || || | || || || ||||| || | || Sbjct 182056 ATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 182115 Query 91049 ---AATAGTTATCACCTTTGTAATCAGACACGCCTGTCCAGCCGCGCCCGTACATGGCGA 91105 ||| ||| || |||||||||| ||||| ||||| || || || ||||| || | Sbjct 182116 GGGAAT-GTTGTC---TTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAA 182171 Query 91106 CACCAATAATTATTTTACTAGAATCAACACCTTGTTTTGTGAGCA-----TTTGCACGGC 91160 |||| | | || || ||| || || || || | |||| ||| | | | Sbjct 182172 CACCTACTACAATCTTCTTAGGATTCACTCCCTGC---GCCAGCAAGTATTTTACTCCGA 182228 Query 91161 ATGATGCGTGGTGTACAACTCGTTCGGGTTCCATTGCGGGGCGTATAGTGTCGTTTGATA 91220 | | | ||||| || || || ||||| || ||||| | || |||||||| Sbjct 182229 AG--TCAGATGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATG 182286 Query 91221 GCCCAAATCGGTATTTGACCAAGCTCCTTTAAAATCGTAAGTCATGACATATATTTTACT 91280 || | | | ||||||||| ||||| || || |||||| |||| | | || | | Sbjct 182287 TCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATC 182346 Query 91281 CAAAAACTTTTGTGCAGCGTCATAATCGACAAGTTCGATCTTGTCATAACCGGCACCGAT 91340 || | | ||||| || | |||| || |||| || ||| || || | || || | || Sbjct 182347 CATATAATTTTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAAT 182406 Query 91341 TGCGCTTGTCAATTCGTACACTTTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACG 91400 || || |||||||| ||||| | | ||| | || || | ||| ||||| Sbjct 182407 AGCAGAAGTTAATTCGTATTTCTTACCATTCTTAGCTGAGAGCTCGTCGAGCATCTCACG 182466 Query 91401 CAACTCTTTTAGCAAAACAATGTATGTAGCAGCGTCGCGTTTCGGATCGCCAATGGCCGG 91460 || ||||| | |||| | || | || | || | | || | || | | | || Sbjct 182467 TAATTCTTTCATCAAACTTACATAACAATCACCATCT--TCTGGGCTA-CCGAGGTCAGG 182523 Query 91461 ATTAGCGCCTTTACCGCCCGGAAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCA 91520 ||||| ||||| || || || || |||||||| ||||| ||||| || || |||||||| Sbjct 182524 GTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCA 182583 Query 91521 AACTTGCAAAAATTCTTTAACCGAATCAACGAA-CACGTT-TCTTCG-TTTGACATCGTG 91577 | | | ||| || || || || | || || | ||| |||| | |||| || | Sbjct 182584 TGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACT-- 182641 Query 91578 CATAAAATAGAACGGGTCCGACAAAGTCCAGCCACCGATGGACGGTAAAACTTTTAAATG 91637 | ||| |||| || || | | ||||| ||||| || || || | || || || | Sbjct 182642 -AAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTC 182700 Query 91638 CGGGTTGGCCAACTTGGCGGCCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCA 91697 ||| ||| || | ||||| || ||||||||||| ||||||||||||||||| Sbjct 182701 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCA 182760 Query 91698 AGCGGATACACCTTTTTGTGGTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTT 91757 | || | ||||||||||||||||||| |||||||| |||||||| || || ||||| Sbjct 182761 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 182820 Query 91758 AAAATCATCGCGTCCTTTGCACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTT 91817 || || || || || | || || || || | || ||||| || || ||| Sbjct 182821 GAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTT 182880 Query 91818 GAGGGCATCGTTTAATCCATCGCCTCCGCAAATGGGTATAAAACCGTACAACAGATG 91874 | ||| || | || || || |||||||| || ||||| ||||| | || ||| Sbjct 182881 TAAACTATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATG 182937 >seq2787 Length=76071 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 |||||| | ||| | || ||||||||||| ||||||||||| | || ||| || ||| Sbjct 40175 AAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATC 40116 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||| ||||| ||||||||| | ||||| | |||||||||| || | |||||| || || Sbjct 40115 TTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTC 40056 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 |||| | || || || | | ||| |||||| | || ||| | || || Sbjct 40055 TTGGATTT-TAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTG 39997 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || | |||||| ||||| |||||||| Sbjct 39996 TTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||| || | ||| || ||||| ||||| ||||| ||||| || | Sbjct 40874 TCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGA 40815 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || |||||||||||| || || ||| | || || | |||||| || ||| Sbjct 40814 CAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGG 40755 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||| |||||||| |||| | || ||||| | | | |||||| || || Sbjct 40754 GATGCCCTCCTTATCCTGTATTT-TAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTA 40696 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||| ||| | || || ||||||||||| ||||| |||||||| Sbjct 40695 CTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || || | ||||||| |||||| || || ||||| || || |||||||| | | Sbjct 41101 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 41042 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| |||||| || || ||||||| | ||||||||| || Sbjct 41041 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 40982 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||||| ||| | | || || || | | ||| ||||| ||||| Sbjct 40981 ATTCCTTCCTTATCTTGAATCT-TAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAAC 40923 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || || |||| || || | |||||| ||||| ||||||||| Sbjct 40922 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | ||||| || || |||||||| ||||||||||| | || || || |||| Sbjct 40630 AGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 40571 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || ||||| ||| ||||||| | ||||||||| ||| | || || ||||| Sbjct 40570 TCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 40511 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | ||| || | | ||| |||||| ||||| || | || || | Sbjct 40510 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTC 40451 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||| || ||||| |||||||| Sbjct 40450 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | | ||||| |||||| || |||||||||||||| || ||||| | Sbjct 39734 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGA 39675 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | ||||||||||| || || || | || | | ||||||||| || Sbjct 39674 AAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 39615 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||| || ||||| | || || || | | ||| ||| || || || Sbjct 39614 AATGCCTTCCTTGTCTTGAATTT-TGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 39556 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||| | || ||| |||| || || | |||||| ||||| || |||||||| Sbjct 39555 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | ||||| || || || || || ||||||||||| | || || || |||| Sbjct 40402 AGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 40343 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||| || || ||| ||||||| | || ||||| || | ||| || || || Sbjct 40342 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 40283 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| | || || || | | ||| ||| ||| ||| || ||| | ||| ||| | Sbjct 40282 TGGATTT-TAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGT 40224 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || | ||||| |||||||| ||||| Sbjct 40223 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191 >seq2396 Length=191974 Score = 105 bits (116), Expect = 5e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 20082 CGCACGCTTTATTCACAACATTTTGCACATAATCACGCCCTTTGACAAGCAGCAAGTATC 20141 ||||||||| | | || || || || || || || |||||||| ||| ||| ||| Sbjct 136796 CGCACGCTTCCGTGATCACCTTCTGGACGTACTCTCGGCCTTTGACCAGCTGCACGTAGG 136737 Query 20142 CACAGTTACTAAACCAACGTGCGTGTTGTTCCCATGGAATGTCATCATTTTCCCAATCTT 20201 | || ||||| || ||||| || ||||| || | ||| || || ||||| || | Sbjct 136736 CGCACCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCT 136677 Query 20202 TAAGGCCGCCATTGCAATAAAAACACAAAGTTTTATCACCGCGCGACGTATAATAAAATC 20261 | || ||||| | || || || ||| |||||| ||||| | || || | |||| Sbjct 136676 TGAGTCCGCCGTCACAGTAGAAGCACTTAGTTTTGTCACCCTGGCCGGTGTAGAAGAATC 136617 Query 20262 CCGCTTCGGCCAATTCATCGGGCCTTTGCTTCATGCTGCGCGGCCA 20307 |||||||||| | ||| || ||| | |||||||| ||||| ||||| Sbjct 136616 CCGCTTCGGCGAGTTCCTCAGGCTTCTGCTTCATACTGCGAGGCCA 136571 >seq3424 Length=494560 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| || || | |||||| || |||||||| || || || ||||| | | ||| Sbjct 290652 AGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGATAATGTGCGC 290593 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||||| ||| || || || | || |||||||||||||| || | ||||||| Sbjct 290592 CCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCC 290533 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 ||||| ||| | | ||| || | | | | || ||| | || ||| | ||| Sbjct 290532 TTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTG 290473 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || |||| || |||| ||| ||||||||||||||||| Sbjct 290472 ATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 |||||| | || | || |||||||| ||||| |||||||| | | ||| | ||| Sbjct 289963 AAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATC 289904 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 || | ||| || || ||| | ||||| |||||||| || || | |||||||||||| Sbjct 289903 CTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATC 289844 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| ||| || | | | | |||||| |||||| ||| | ||||| | Sbjct 289843 TTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGT 289784 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| |||| ||| || ||||| ||||||||| Sbjct 289783 CTTGCCAGTCAGTGTCTTCACAAATATTTGCATT 289750 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| ||| | |||||||| || ||||| |||||||| | | ||| | |||| Sbjct 289506 AGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 289447 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| | ||||||||||| ||||| ||| | || || ||||| Sbjct 289446 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCC 289387 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||||| ||| || | | ||| || ||| | || ||| | ||||| | Sbjct 289386 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTC 289327 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| |||| ||| |||||||||||||||||| Sbjct 289326 TTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 289294 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | ||| | || |||||||| ||||||||||| || | | ||| | |||| Sbjct 289050 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 288991 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| | ||||||||||| ||||| ||| | || || ||||| Sbjct 288990 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCC 288931 Query 18234 GCAATTTGTTGCTTGACC-TGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| | |||| | | | | ||| || ||| ||||| ||| | ||||| | Sbjct 288930 TGAATTT-TCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGT 288872 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| |||| ||| ||||| |||||||||||| Sbjct 288871 CTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 288838 Score = 95.1 bits (104), Expect = 9e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || || || || || || || ||||| | || ||| | |||||||| ||| || || Sbjct 290175 GTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCG 290116 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || | || |||||||||||||| || | ||||||||| || ||| | | ||| Sbjct 290115 GCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTA 290056 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | | | |||||| | ||| ||| | ||| || ||||||| ||||||||| Sbjct 290055 ACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATAGTTTTGCCAGTCAATGTT 289996 Query 18309 TTTACAAAAATTTGCAT 18325 || |||||||||||||| Sbjct 289995 TTCACAAAAATTTGCAT 289979 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| || | || ||||| || ||||| |||||||| | | ||| | |||| Sbjct 289734 AGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 289675 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| | ||||||||||| ||||| ||| | ||| || ||||| Sbjct 289674 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCC 289615 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||||| ||| || | | ||| || ||| | || ||| | ||||| | Sbjct 289614 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTC 289555 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| |||| ||| |||||||| ||||||||| Sbjct 289554 TTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522 >seq1305 Length=286731 Score = 89.7 bits (98), Expect = 4e-13 Identities = 171/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 18094 GTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGT 18153 |||| ||||| || |||| ||| || | || | ||| ||||| |||||||||||||||| Sbjct 24754 GTTA-CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGT 24812 Query 18154 CGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCA 18213 | | || ||| | |||||| | |||||| || ||| |||| | | ||| || || Sbjct 24813 CAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTG 24872 Query 18214 CGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGC 18272 || | ||||||||||| |||| | || || || | | | | ||| || || | Sbjct 24873 GTGGAATACCTTCCTTATCTTGGATTT-TAGCTTTTACATTTTCTATAGTATCGGAGGCC 24931 Query 18273 TCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332 || || | ||| ||| |||| || || | || || || |||||||||||| | | | Sbjct 24932 TCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGA 24991 Query 18333 CTCTTATA 18340 || | ||| Sbjct 24992 CTGTAATA 24999 >seq3388 Length=400618 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| || || | ||| ||||| ||||| ||||||||||||||||||| Sbjct 243944 CCACCTCGGAGTCGGAGCACTAAGTGTAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAA 243885 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202 | |||| | ||||||||||||||| || ||| |||| | ||| Sbjct 243884 AGTGTTCGGCCATCTTCCAATTGTTTACCGGCAAAGATCAATCT 243841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379324078394205