Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 181 8e-41
seq2787 109 4e-19
seq2396 105 5e-18
seq3424 100 2e-16
seq1305 89.7 4e-13
seq3388 84.2 2e-11
>seq3463
Length=282612
Score = 181 bits (200), Expect = 8e-41
Identities = 586/897 (65%), Gaps = 27/897 (3%)
Strand=Plus/Plus
Query 90990 ATAGTCAACGACTCCATCTTCCCACGTGCCCGTAACCGGACCGTTAGCGACACCA-TCAA 91048
||||||||| ||||| |||| ||| || || | || || || ||||| || | ||
Sbjct 182056 ATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 182115
Query 91049 ---AATAGTTATCACCTTTGTAATCAGACACGCCTGTCCAGCCGCGCCCGTACATGGCGA 91105
||| ||| || |||||||||| ||||| ||||| || || || ||||| || |
Sbjct 182116 GGGAAT-GTTGTC---TTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAA 182171
Query 91106 CACCAATAATTATTTTACTAGAATCAACACCTTGTTTTGTGAGCA-----TTTGCACGGC 91160
|||| | | || || ||| || || || || | |||| ||| | | |
Sbjct 182172 CACCTACTACAATCTTCTTAGGATTCACTCCCTGC---GCCAGCAAGTATTTTACTCCGA 182228
Query 91161 ATGATGCGTGGTGTACAACTCGTTCGGGTTCCATTGCGGGGCGTATAGTGTCGTTTGATA 91220
| | | ||||| || || || ||||| || ||||| | || ||||||||
Sbjct 182229 AG--TCAGATGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATG 182286
Query 91221 GCCCAAATCGGTATTTGACCAAGCTCCTTTAAAATCGTAAGTCATGACATATATTTTACT 91280
|| | | | ||||||||| ||||| || || |||||| |||| | | || | |
Sbjct 182287 TCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATC 182346
Query 91281 CAAAAACTTTTGTGCAGCGTCATAATCGACAAGTTCGATCTTGTCATAACCGGCACCGAT 91340
|| | | ||||| || | |||| || |||| || ||| || || | || || | ||
Sbjct 182347 CATATAATTTTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAAT 182406
Query 91341 TGCGCTTGTCAATTCGTACACTTTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACG 91400
|| || |||||||| ||||| | | ||| | || || | ||| |||||
Sbjct 182407 AGCAGAAGTTAATTCGTATTTCTTACCATTCTTAGCTGAGAGCTCGTCGAGCATCTCACG 182466
Query 91401 CAACTCTTTTAGCAAAACAATGTATGTAGCAGCGTCGCGTTTCGGATCGCCAATGGCCGG 91460
|| ||||| | |||| | || | || | || | | || | || | | | ||
Sbjct 182467 TAATTCTTTCATCAAACTTACATAACAATCACCATCT--TCTGGGCTA-CCGAGGTCAGG 182523
Query 91461 ATTAGCGCCTTTACCGCCCGGAAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCA 91520
||||| ||||| || || || || |||||||| ||||| ||||| || || ||||||||
Sbjct 182524 GTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCA 182583
Query 91521 AACTTGCAAAAATTCTTTAACCGAATCAACGAA-CACGTT-TCTTCG-TTTGACATCGTG 91577
| | | ||| || || || || | || || | ||| |||| | |||| || |
Sbjct 182584 TGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACT-- 182641
Query 91578 CATAAAATAGAACGGGTCCGACAAAGTCCAGCCACCGATGGACGGTAAAACTTTTAAATG 91637
| ||| |||| || || | | ||||| ||||| || || || | || || || |
Sbjct 182642 -AAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTC 182700
Query 91638 CGGGTTGGCCAACTTGGCGGCCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCA 91697
||| ||| || | ||||| || ||||||||||| |||||||||||||||||
Sbjct 182701 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCA 182760
Query 91698 AGCGGATACACCTTTTTGTGGTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTT 91757
| || | ||||||||||||||||||| |||||||| |||||||| || || |||||
Sbjct 182761 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 182820
Query 91758 AAAATCATCGCGTCCTTTGCACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTT 91817
|| || || || || | || || || || | || ||||| || || |||
Sbjct 182821 GAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTT 182880
Query 91818 GAGGGCATCGTTTAATCCATCGCCTCCGCAAATGGGTATAAAACCGTACAACAGATG 91874
| ||| || | || || || |||||||| || ||||| ||||| | || |||
Sbjct 182881 TAAACTATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATG 182937
>seq2787
Length=76071
Score = 109 bits (120), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172
|||||| | ||| | || ||||||||||| ||||||||||| | || ||| || |||
Sbjct 40175 AAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATC 40116
Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||| ||||| ||||||||| | ||||| | |||||||||| || | |||||| || ||
Sbjct 40115 TTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTC 40056
Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
|||| | || || || | | ||| |||||| | || ||| | || ||
Sbjct 40055 TTGGATTT-TAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTG 39997
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| || || | |||||| ||||| ||||||||
Sbjct 39996 TTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || || | ||| || | ||| || ||||| ||||| ||||| ||||| || |
Sbjct 40874 TCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGA 40815
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| || || |||||||||||| || || ||| | || || | |||||| || |||
Sbjct 40814 CAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGG 40755
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||| |||||||| |||| | || ||||| | | | |||||| || ||
Sbjct 40754 GATGCCCTCCTTATCCTGTATTT-TAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTA 40696
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | ||| ||| | || || ||||||||||| ||||| ||||||||
Sbjct 40695 CTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| || || | ||||||| |||||| || || ||||| || || |||||||| | |
Sbjct 41101 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 41042
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | |||||||| |||||| || || ||||||| | ||||||||| ||
Sbjct 41041 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 40982
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| ||||||||||| ||| | | || || || | | ||| ||||| |||||
Sbjct 40981 ATTCCTTCCTTATCTTGAATCT-TAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAAC 40923
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | || || |||| || || | |||||| ||||| |||||||||
Sbjct 40922 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||| | ||||| || || |||||||| ||||||||||| | || || || ||||
Sbjct 40630 AGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 40571
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || ||||| ||| ||||||| | ||||||||| ||| | || || |||||
Sbjct 40570 TCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 40511
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||| | ||| || | | ||| |||||| ||||| || | || || |
Sbjct 40510 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTC 40451
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| || | ||| || ||||| ||||||||
Sbjct 40450 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || || | | ||||| |||||| || |||||||||||||| || ||||| |
Sbjct 39734 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGA 39675
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | ||||||||||| || || || | || | | ||||||||| ||
Sbjct 39674 AAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 39615
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||||||||| || ||||| | || || || | | ||| ||| || || ||
Sbjct 39614 AATGCCTTCCTTGTCTTGAATTT-TGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 39556
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||| | || ||| |||| || || | |||||| ||||| || ||||||||
Sbjct 39555 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||| | ||||| || || || || || ||||||||||| | || || || ||||
Sbjct 40402 AGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 40343
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||||||| || || ||| ||||||| | || ||||| || | ||| || || ||
Sbjct 40342 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 40283
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
|||| | || || || | | ||| ||| ||| ||| || ||| | ||| ||| |
Sbjct 40282 TGGATTT-TAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGT 40224
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || || | ||||| |||||||| |||||
Sbjct 40223 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191
>seq2396
Length=191974
Score = 105 bits (116), Expect = 5e-18
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 20082 CGCACGCTTTATTCACAACATTTTGCACATAATCACGCCCTTTGACAAGCAGCAAGTATC 20141
||||||||| | | || || || || || || || |||||||| ||| ||| |||
Sbjct 136796 CGCACGCTTCCGTGATCACCTTCTGGACGTACTCTCGGCCTTTGACCAGCTGCACGTAGG 136737
Query 20142 CACAGTTACTAAACCAACGTGCGTGTTGTTCCCATGGAATGTCATCATTTTCCCAATCTT 20201
| || ||||| || ||||| || ||||| || | ||| || || ||||| || |
Sbjct 136736 CGCACCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCT 136677
Query 20202 TAAGGCCGCCATTGCAATAAAAACACAAAGTTTTATCACCGCGCGACGTATAATAAAATC 20261
| || ||||| | || || || ||| |||||| ||||| | || || | ||||
Sbjct 136676 TGAGTCCGCCGTCACAGTAGAAGCACTTAGTTTTGTCACCCTGGCCGGTGTAGAAGAATC 136617
Query 20262 CCGCTTCGGCCAATTCATCGGGCCTTTGCTTCATGCTGCGCGGCCA 20307
|||||||||| | ||| || ||| | |||||||| ||||| |||||
Sbjct 136616 CCGCTTCGGCGAGTTCCTCAGGCTTCTGCTTCATACTGCGAGGCCA 136571
>seq3424
Length=494560
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| || || | |||||| || |||||||| || || || ||||| | | |||
Sbjct 290652 AGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGATAATGTGCGC 290593
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| |||||||| ||| || || || | || |||||||||||||| || | |||||||
Sbjct 290592 CCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCC 290533
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
||||| ||| | | ||| || | | | | || ||| | || ||| | |||
Sbjct 290532 TTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTG 290473
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| |||| || |||| ||| |||||||||||||||||
Sbjct 290472 ATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172
|||||| | || | || |||||||| ||||| |||||||| | | ||| | |||
Sbjct 289963 AAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATC 289904
Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
|| | ||| || || ||| | ||||| |||||||| || || | ||||||||||||
Sbjct 289903 CTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATC 289844
Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||||| ||| || | | | | |||||| |||||| ||| | ||||| |
Sbjct 289843 TTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGT 289784
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| |||| ||| || ||||| |||||||||
Sbjct 289783 CTTGCCAGTCAGTGTCTTCACAAATATTTGCATT 289750
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||||| ||| | |||||||| || ||||| |||||||| | | ||| | ||||
Sbjct 289506 AGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 289447
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || || || ||| | ||||||||||| ||||| ||| | || || |||||
Sbjct 289446 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCC 289387
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||||| ||| || | | ||| || ||| | || ||| | ||||| |
Sbjct 289386 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTC 289327
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| |||| ||| ||||||||||||||||||
Sbjct 289326 TTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 289294
Score = 95.1 bits (104), Expect = 9e-15
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||| | ||| | || |||||||| ||||||||||| || | | ||| | ||||
Sbjct 289050 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 288991
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || || || ||| | ||||||||||| ||||| ||| | || || |||||
Sbjct 288990 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCC 288931
Query 18234 GCAATTTGTTGCTTGACC-TGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||||| | |||| | | | | ||| || ||| ||||| ||| | ||||| |
Sbjct 288930 TGAATTT-TCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGT 288872
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| |||| ||| ||||| ||||||||||||
Sbjct 288871 CTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 288838
Score = 95.1 bits (104), Expect = 9e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| || || || || || || ||||| | || ||| | |||||||| ||| || ||
Sbjct 290175 GTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCG 290116
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| | || |||||||||||||| || | ||||||||| || ||| | | |||
Sbjct 290115 GCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTA 290056
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | | | | |||||| | ||| ||| | ||| || ||||||| |||||||||
Sbjct 290055 ACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATAGTTTTGCCAGTCAATGTT 289996
Query 18309 TTTACAAAAATTTGCAT 18325
|| ||||||||||||||
Sbjct 289995 TTCACAAAAATTTGCAT 289979
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||||| || | || ||||| || ||||| |||||||| | | ||| | ||||
Sbjct 289734 AGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 289675
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || || || ||| | ||||||||||| ||||| ||| | ||| || |||||
Sbjct 289674 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCC 289615
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||||| ||| || | | ||| || ||| | || ||| | ||||| |
Sbjct 289614 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTC 289555
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| |||| ||| |||||||| |||||||||
Sbjct 289554 TTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522
>seq1305
Length=286731
Score = 89.7 bits (98), Expect = 4e-13
Identities = 171/248 (69%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 18094 GTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGT 18153
|||| ||||| || |||| ||| || | || | ||| ||||| ||||||||||||||||
Sbjct 24754 GTTA-CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGT 24812
Query 18154 CGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCA 18213
| | || ||| | |||||| | |||||| || ||| |||| | | ||| || ||
Sbjct 24813 CAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTG 24872
Query 18214 CGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGC 18272
|| | ||||||||||| |||| | || || || | | | | ||| || || |
Sbjct 24873 GTGGAATACCTTCCTTATCTTGGATTT-TAGCTTTTACATTTTCTATAGTATCGGAGGCC 24931
Query 18273 TCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332
|| || | ||| ||| |||| || || | || || || |||||||||||| | | |
Sbjct 24932 TCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGA 24991
Query 18333 CTCTTATA 18340
|| | |||
Sbjct 24992 CTGTAATA 24999
>seq3388
Length=400618
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || |||| || || | ||| ||||| ||||| |||||||||||||||||||
Sbjct 243944 CCACCTCGGAGTCGGAGCACTAAGTGTAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAA 243885
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202
| |||| | ||||||||||||||| || ||| |||| | |||
Sbjct 243884 AGTGTTCGGCCATCTTCCAATTGTTTACCGGCAAAGATCAATCT 243841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379324078394205
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