Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3345 587 7e-163 seq1351 147 2e-30 seq2787 113 4e-20 seq3424 105 6e-18 seq1305 105 6e-18 >seq3345 Length=207354 Score = 587 bits (650), Expect = 7e-163 Identities = 1214/1789 (68%), Gaps = 40/1789 (2%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 ||||| || |||||||| || || ||||| || ||||| ||||| | || ||||| || Sbjct 113386 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 113327 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG- 22224 || || | |||||| ||||| |||| ||||| |||||||| | ||||||||| | || Sbjct 113326 GTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGT 113267 Query 22225 ----CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280 ||| |||||| || || || ||||| || || ||||| ||||||| ||| | Sbjct 113266 TTAGCAA---CATGTATG--TTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAG 113212 Query 22281 CGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340 | ||||| | ||| |||| || || || ||||||||||| ||||||| | || | Sbjct 113211 CTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTA 113152 Query 22341 TCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT 22400 | ||| || || ||| || || | || || || |||| ||| || | ||||| Sbjct 113151 TTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTT 113092 Query 22401 TAATCGTATCGTTCCACAAACCGATGGCG-GTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || | ||||||| | | || |||||||| | | |||||| ||||||| Sbjct 113091 TCATATCTTCATCCCACAAATC-AGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACT 113033 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || |||| || || || ||||| | | ||||||||| || ||||| || ||||| ||| Sbjct 113032 ACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAA 112973 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 |||||| |||| || || || || || || || || |||||||| || || | || ||| Sbjct 112972 GATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGA 112913 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAAT-TTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638 || || | ||| || || |||| || ||| || ||||| | ||||||||| || || Sbjct 112912 GAATTGCGCAAACCATGTTTTGCTATCTTTTCT-TTGAGGGCAGCCCAGTCCCAAAGGTC 112854 Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698 | || || |||||||||||||| || || | | || | || || || || || Sbjct 112853 TGTAGGAGT---TTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCC 112797 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758 || || || ||| | ||| | | | | || | ||| || || || || || || || Sbjct 112796 TTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACC 112737 Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG----GCGGCGACGCTTTCGT 22814 ||||| || || || || || ||||| | | | | || | ||||||| Sbjct 112736 ATAATAAATTGTTTCAAATAT----TTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 112681 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | | || | ||||| ||| ||||| || ||||| |||||||| || ||||| || |||| Sbjct 112680 AAGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTC 112621 Query 22875 GGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934 | | ||| ||| || |||||| || || | |||||| |||| ||| || | Sbjct 112620 TATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTT 112561 Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994 |||| || ||| || ||||| || || || | ||| | |||| Sbjct 112560 TGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAAT--TAAATCT 112503 Query 22995 CCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGT 23054 ||| | |||||||| |||| | || || || ||||| ||||| || ||||| || | Sbjct 112502 ATTATT-TTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT 112444 Query 23055 CTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAAT 23114 ||| || ||||| | |||| || || || ||||||||||| || || ||||| | || Sbjct 112443 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 112384 Query 23115 TGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCT 23174 | | || || || |||| || || | |||||| || | |||||| || || || |||| Sbjct 112383 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 112324 Query 23175 CGACCTGCGACTCGATGATCGCTCGCCACATAGTC-TGAGCGTGAACACGTCGCACGTAC 23233 | || || | || || || | ||| | | || ||||| || || | | Sbjct 112323 CTACTTGGGCTTCTATAATTGACTTCCATA-ACTCTTGAGCTCTGACTTGTTTTATAAAT 112265 Query 23234 CTGCCTTCTTCCTCGTACTTTTGG--TACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 | |||||| || || ||||| || | | |||||||| | || | ||||| | Sbjct 112264 CGTTTTTCTTCTTCATA--TTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAG 112207 Query 23292 CCAGGCCGGGCGATTGCAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGT 23350 | ||||| || | | ||| ||||||||||||||||| | | || ||||| || | | Sbjct 112206 CGAGGCCAGGACAAT-CATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 112148 Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410 ||||||| ||||| |||||||||| || || |||||||| | || | || || || Sbjct 112147 TTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 112088 Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 || || |||||||| || |||||||| || || || | ||| |||||||| ||||| | Sbjct 112087 TTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAA 112028 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 |||| ||||| || || || | || || || || ||||| || || | ||| || ||| Sbjct 112027 TAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 111968 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590 || |||||||| | ||| ||||| ||||| || || | || ||| || | Sbjct 111967 TTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAA 111908 Query 23591 GAACCTTTTGCTC-GA-ACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648 ||||| | |||| || | |||| | || ||||||||||| || | ||||| || | Sbjct 111907 GAACCCTGAGCTCTGATGCAATGTGTA--TGTAAACCTATGCCACCAGCAGATTTAGAAA 111850 Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708 | | || |||||||| | ||| || | || || || ||||| || ||||| | || | Sbjct 111849 TTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTA 111790 Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768 | ||| || || || | |||| || || || || ||||| ||||| ||||| | Sbjct 111789 TAAGGAAGCAGGAGGAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAATAGTGTAGGGCTTG 111730 Query 23769 CGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCT 23828 | || ||||| ||| | ||||| | ||| || || | ||| || ||||||||| | Sbjct 111729 CATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTT 111670 Query 23829 CTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 | || || || || |||| ||| | ||| | ||||| |||||| || || Sbjct 111669 CACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 111621 >seq1351 Length=825266 Score = 147 bits (162), Expect = 2e-30 Identities = 165/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 57634 AGGATCTGAGC-GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692 |||| || ||| |||||||| | | ||||| | ||||| | ||||||| || || || Sbjct 602446 AGGA-CTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCATGTT 602388 Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752 || || || || || || || |||||||||||||| ||||| ||||| || | |||||| Sbjct 602387 TTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTTTCA 602328 Query 57753 CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAAC 57812 ||||| || |||||||| || || || ||||| || || |||||| | || || ||||| Sbjct 602327 CAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAAT 602268 Query 57813 GTGCATTCAGAAATGTATTCGCTACTCATCGATACGTA 57850 || |||||||| ||||| || || | || || || || Sbjct 602267 GTTCATTCAGAGATGTACTCTTTATTAATTGACACATA 602230 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGA 57568 |||||| || ||| || ||||| | | ||||| || || || || |||||||||| Sbjct 602695 TGAACCCCTGTTGAGGGAAAATCCTAGACGTTTTGTTATATTCCCAATCCAATATCCAGA 602636 Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628 || ||| | ||||| ||||| || ||||||||||||||||| | |||||||||||| | Sbjct 602635 TATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGGACTGCAGAAGAAGTAGACTT 602576 Query 57629 GTCTAAGG 57636 || |||| Sbjct 602575 ATCCAAGG 602568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379 || ||||| || | ||||| || |||||||||||||| ||||| | || ||||| ||| Sbjct 599553 CACTACAATACACAGAATCCATTCGATTTTATGAATCTCATCTCATTGGAAGGCAAAACA 599494 Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAG 58439 || || || || || |||||| | ||||| || || | || |||||| ||| ||| Sbjct 599493 AATTTCTTTGAGAAGAAAGTTGGAGAATACCAGAAGTGGGGAGTGATG-GCG----CAAC 599439 Query 58440 TTGGAGGACGATATTTTCACTTTGGATGCTGCCTTTTAA 58478 | |||| || |||||||||| ||||||| |||||| Sbjct 599438 CT-ATGGACAATGTTTTCACTTTAGATGCTGAATTTTAA 599401 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 ||||||||||| ||| | | | ||||| ||| || || || || | || | Sbjct 601580 AAGAAGGCAGACTGGGCGTTACAGTGGATCGGCAGCAAGACAGCTACATTTGGAGAACGT 601521 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 |||| || || || || || || || ||||| || || ||||||||||| |||||||| Sbjct 601520 ATAATTGCTTTTGCAGCAGTTGAGGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTT 601461 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 ||| |||| ||||| || ||||||||||| |||| || || || || Sbjct 601460 TGGTTGAAAAAACGAGGTCTGATGCCCGGATTGACTTTCAGTAATGA 601414 >seq2787 Length=76071 Score = 113 bits (124), Expect = 4e-20 Identities = 156/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 |||||| ||||| || || || || || || || || ||||| || || | || ||||| Sbjct 39501 ATCAAA-ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGA 39559 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 ||| ||||| | | | |||| || ||| | ||| |||||||||||| | || || Sbjct 39560 ACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCC 39619 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || || || ||| | || |||||||| || || ||||||||| ||| | || Sbjct 39620 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGA 39679 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||||| |||||||||||||| |||||||| ||||| Sbjct 39680 CTATAATATTCAAAAAGAATCTACTCTTCACTTGGTA 39716 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || || || || ||||| | || || || || ||| Sbjct 41331 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 41390 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||||| || || | || || ||||| ||| | || || ||||| Sbjct 41391 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 41450 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| |||||||| || || ||| || || |||||| Sbjct 41451 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 41510 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||||||||| ||| | ||| | |||||| Sbjct 41511 ATCCAAAAAGAATCTACTTTGCATTTAGTACTT 41543 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || || || || || || || || ||| | || || ||||| || Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | ||| ||||| || ||| | || || || ||| Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || || |||||||| | || || || || ||| Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || |||||||| ||||| | ||| | || |||| Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTA 40419 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || |||||||| |||||||| ||||| ||||| | || |||||||| || Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || ||| | || ||||| || || | || || || || Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||| || ||||||||||| ||| |||| || Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGA 41257 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || ||||| || || | || |||||| | || Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| ||||| |||||| | || || || || Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || ||||| || || ||||| | || || || || ||| Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||| ||| | || | |||||| | | || || |||| Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 40191 >seq3424 Length=494560 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||||||||| ||||| ||||| || ||||| | || ||||| || || Sbjct 288839 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCT 288898 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| || ||| ||| || || || | || || || ||| Sbjct 288899 GATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAG 288958 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369 || | || || || ||||| || ||| | ||||| | | | ||||| ||||| Sbjct 288959 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTAT--CTGATTAC 289015 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| |||||||| ||| | || || ||||| | ||||| || || Sbjct 289016 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGG 289065 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || |||||||| ||||| ||||| || ||||| | || || ||| | || Sbjct 289523 ATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTCT 289582 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || || ||| ||| || || ||| | || || || ||| Sbjct 289583 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCAG 289642 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369 || | || || || ||||| || ||| | ||||| | | | ||||| | | || Sbjct 289643 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTATCTG--ACTAC 289699 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || ||||| ||| | ||||||||||| | ||||| || || Sbjct 289700 AATATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGG 289749 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| |||||||| ||||| || ||||| ||||| | || || ||| | || Sbjct 290434 CATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 290493 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | |||| || || || || || || ||||||||| | || || || | Sbjct 290494 TGATACAATAGAAAATGTTAAGGCAAAG-ATTCAAGATAAGGAAGGCATTCCTCCAGATC 290552 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTAT 31369 | || | || || ||||| || || || ||||||| | | || | | || ||| Sbjct 290553 AACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGA-TGGGCGCACATTATCAGACTAT 290611 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || |||||||| || ||||| || || || ||||| || || ||| Sbjct 290612 AATATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGGT 290662 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| |||||||| ||||| ||||| || ||||| | || || ||| | || Sbjct 289295 ATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTCT 289354 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || || ||| ||| || || || | || || || ||| Sbjct 289355 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCAG 289414 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369 || | || || || ||||| || ||| | ||||| | | | ||||| || || Sbjct 289415 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTAT--CTGACTAC 289471 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || ||||| ||| | || |||||||| | ||||| || || Sbjct 289472 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGG 289521 >seq1305 Length=286731 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || || ||||| || ||| |||| || || | ||| Sbjct 24984 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCC 24925 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | ||| || |||||||| | || || |||||| Sbjct 24924 GATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAG 24865 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||| | || || ||||| ||||| | ||||| | | | || || || || || Sbjct 24864 CAACGTTTGATCTTTGCTGGTAAACAACTAGAAGA-TGGACGTACATTGTCTGACTACAA 24806 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||| ||||| || | ||||| || ||| |||| | || |||| Sbjct 24805 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTA 24756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445742389907280