Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 587 7e-163
seq1351 147 2e-30
seq2787 113 4e-20
seq3424 105 6e-18
seq1305 105 6e-18
>seq3345
Length=207354
Score = 587 bits (650), Expect = 7e-163
Identities = 1214/1789 (68%), Gaps = 40/1789 (2%)
Strand=Plus/Minus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
||||| || |||||||| || || ||||| || ||||| ||||| | || ||||| ||
Sbjct 113386 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 113327
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG- 22224
|| || | |||||| ||||| |||| ||||| |||||||| | ||||||||| | ||
Sbjct 113326 GTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGT 113267
Query 22225 ----CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280
||| |||||| || || || ||||| || || ||||| ||||||| ||| |
Sbjct 113266 TTAGCAA---CATGTATG--TTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAG 113212
Query 22281 CGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340
| ||||| | ||| |||| || || || ||||||||||| ||||||| | || |
Sbjct 113211 CTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTA 113152
Query 22341 TCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT 22400
| ||| || || ||| || || | || || || |||| ||| || | |||||
Sbjct 113151 TTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTT 113092
Query 22401 TAATCGTATCGTTCCACAAACCGATGGCG-GTCAAATCTTTGACCAGATGACGGTTCACC 22459
| || || | ||||||| | | || |||||||| | | |||||| |||||||
Sbjct 113091 TCATATCTTCATCCCACAAATC-AGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACT 113033
Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519
|| |||| || || || ||||| | | ||||||||| || ||||| || ||||| |||
Sbjct 113032 ACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAA 112973
Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579
|||||| |||| || || || || || || || || |||||||| || || | || |||
Sbjct 112972 GATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGA 112913
Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAAT-TTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638
|| || | ||| || || |||| || ||| || ||||| | ||||||||| || ||
Sbjct 112912 GAATTGCGCAAACCATGTTTTGCTATCTTTTCT-TTGAGGGCAGCCCAGTCCCAAAGGTC 112854
Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698
| || || |||||||||||||| || || | | || | || || || || ||
Sbjct 112853 TGTAGGAGT---TTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCC 112797
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758
|| || || ||| | ||| | | | | || | ||| || || || || || || ||
Sbjct 112796 TTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACC 112737
Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG----GCGGCGACGCTTTCGT 22814
||||| || || || || || ||||| | | | | || | |||||||
Sbjct 112736 ATAATAAATTGTTTCAAATAT----TTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 112681
Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874
| | || | ||||| ||| ||||| || ||||| |||||||| || ||||| || ||||
Sbjct 112680 AAGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTC 112621
Query 22875 GGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934
| | ||| ||| || |||||| || || | |||||| |||| ||| || |
Sbjct 112620 TATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTT 112561
Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994
|||| || ||| || ||||| || || || | ||| | ||||
Sbjct 112560 TGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAAT--TAAATCT 112503
Query 22995 CCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGT 23054
||| | |||||||| |||| | || || || ||||| ||||| || ||||| || |
Sbjct 112502 ATTATT-TTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT 112444
Query 23055 CTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAAT 23114
||| || ||||| | |||| || || || ||||||||||| || || ||||| | ||
Sbjct 112443 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 112384
Query 23115 TGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCT 23174
| | || || || |||| || || | |||||| || | |||||| || || || ||||
Sbjct 112383 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 112324
Query 23175 CGACCTGCGACTCGATGATCGCTCGCCACATAGTC-TGAGCGTGAACACGTCGCACGTAC 23233
| || || | || || || | ||| | | || ||||| || || | |
Sbjct 112323 CTACTTGGGCTTCTATAATTGACTTCCATA-ACTCTTGAGCTCTGACTTGTTTTATAAAT 112265
Query 23234 CTGCCTTCTTCCTCGTACTTTTGG--TACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291
| |||||| || || ||||| || | | |||||||| | || | ||||| |
Sbjct 112264 CGTTTTTCTTCTTCATA--TTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAG 112207
Query 23292 CCAGGCCGGGCGATTGCAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGT 23350
| ||||| || | | ||| ||||||||||||||||| | | || ||||| || | |
Sbjct 112206 CGAGGCCAGGACAAT-CATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 112148
Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410
||||||| ||||| |||||||||| || || |||||||| | || | || || ||
Sbjct 112147 TTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 112088
Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470
|| || |||||||| || |||||||| || || || | ||| |||||||| ||||| |
Sbjct 112087 TTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAA 112028
Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530
|||| ||||| || || || | || || || || ||||| || || | ||| || |||
Sbjct 112027 TAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 111968
Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590
|| |||||||| | ||| ||||| ||||| || || | || ||| || |
Sbjct 111967 TTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAA 111908
Query 23591 GAACCTTTTGCTC-GA-ACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648
||||| | |||| || | |||| | || ||||||||||| || | ||||| || |
Sbjct 111907 GAACCCTGAGCTCTGATGCAATGTGTA--TGTAAACCTATGCCACCAGCAGATTTAGAAA 111850
Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708
| | || |||||||| | ||| || | || || || ||||| || ||||| | || |
Sbjct 111849 TTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTA 111790
Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768
| ||| || || || | |||| || || || || ||||| ||||| ||||| |
Sbjct 111789 TAAGGAAGCAGGAGGAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAATAGTGTAGGGCTTG 111730
Query 23769 CGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCT 23828
| || ||||| ||| | ||||| | ||| || || | ||| || ||||||||| |
Sbjct 111729 CATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTT 111670
Query 23829 CTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877
| || || || || |||| ||| | ||| | ||||| |||||| || ||
Sbjct 111669 CACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 111621
>seq1351
Length=825266
Score = 147 bits (162), Expect = 2e-30
Identities = 165/218 (76%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 57634 AGGATCTGAGC-GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692
|||| || ||| |||||||| | | ||||| | ||||| | ||||||| || || ||
Sbjct 602446 AGGA-CTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCATGTT 602388
Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752
|| || || || || || || |||||||||||||| ||||| ||||| || | ||||||
Sbjct 602387 TTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTTTCA 602328
Query 57753 CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAAC 57812
||||| || |||||||| || || || ||||| || || |||||| | || || |||||
Sbjct 602327 CAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAAT 602268
Query 57813 GTGCATTCAGAAATGTATTCGCTACTCATCGATACGTA 57850
|| |||||||| ||||| || || | || || || ||
Sbjct 602267 GTTCATTCAGAGATGTACTCTTTATTAATTGACACATA 602230
Score = 96.9 bits (106), Expect = 3e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGA 57568
|||||| || ||| || ||||| | | ||||| || || || || ||||||||||
Sbjct 602695 TGAACCCCTGTTGAGGGAAAATCCTAGACGTTTTGTTATATTCCCAATCCAATATCCAGA 602636
Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628
|| ||| | ||||| ||||| || ||||||||||||||||| | |||||||||||| |
Sbjct 602635 TATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGGACTGCAGAAGAAGTAGACTT 602576
Query 57629 GTCTAAGG 57636
|| ||||
Sbjct 602575 ATCCAAGG 602568
Score = 95.1 bits (104), Expect = 1e-14
Identities = 118/159 (74%), Gaps = 6/159 (4%)
Strand=Plus/Minus
Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379
|| ||||| || | ||||| || |||||||||||||| ||||| | || ||||| |||
Sbjct 599553 CACTACAATACACAGAATCCATTCGATTTTATGAATCTCATCTCATTGGAAGGCAAAACA 599494
Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAG 58439
|| || || || || |||||| | ||||| || || | || |||||| ||| |||
Sbjct 599493 AATTTCTTTGAGAAGAAAGTTGGAGAATACCAGAAGTGGGGAGTGATG-GCG----CAAC 599439
Query 58440 TTGGAGGACGATATTTTCACTTTGGATGCTGCCTTTTAA 58478
| |||| || |||||||||| ||||||| ||||||
Sbjct 599438 CT-ATGGACAATGTTTTCACTTTAGATGCTGAATTTTAA 599401
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974
||||||||||| ||| | | | ||||| ||| || || || || | || |
Sbjct 601580 AAGAAGGCAGACTGGGCGTTACAGTGGATCGGCAGCAAGACAGCTACATTTGGAGAACGT 601521
Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034
|||| || || || || || || || ||||| || || ||||||||||| ||||||||
Sbjct 601520 ATAATTGCTTTTGCAGCAGTTGAGGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTT 601461
Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
||| |||| ||||| || ||||||||||| |||| || || || ||
Sbjct 601460 TGGTTGAAAAAACGAGGTCTGATGCCCGGATTGACTTTCAGTAATGA 601414
>seq2787
Length=76071
Score = 113 bits (124), Expect = 4e-20
Identities = 156/217 (72%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245
|||||| ||||| || || || || || || || || ||||| || || | || |||||
Sbjct 39501 ATCAAA-ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGA 39559
Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305
||| ||||| | | | |||| || ||| | ||| |||||||||||| | || ||
Sbjct 39560 ACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCC 39619
Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365
|| || || ||| | || |||||||| || || ||||||||| ||| | ||
Sbjct 39620 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGA 39679
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402
||||| |||||||||||||| |||||||| |||||
Sbjct 39680 CTATAATATTCAAAAAGAATCTACTCTTCACTTGGTA 39716
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||||| || || || || ||||| | || || || || |||
Sbjct 41331 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 41390
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||||| || || | || || ||||| ||| | || || |||||
Sbjct 41391 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 41450
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| |||||||| || || ||| || || ||||||
Sbjct 41451 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 41510
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|| ||||||||||| ||| | ||| | ||||||
Sbjct 41511 ATCCAAAAAGAATCTACTTTGCATTTAGTACTT 41543
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || || || || || || || || || ||| | || || ||||| ||
Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | |||| || ||| | ||| ||||| || ||| | || || || |||
Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || || |||||||| | || || || || |||
Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || || |||||||| ||||| | ||| | || ||||
Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTA 40419
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || |||||||| |||||||| ||||| ||||| | || |||||||| ||
Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | |||| || ||| | || ||||| || || | || || || ||
Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||||| || ||||||||||| ||| |||| ||
Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGA 41257
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || || || || || || ||||| || || | || |||||| | ||
Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || ||| | ||| ||||| |||||| | || || || ||
Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || ||||| || || ||||| | || || || || |||
Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||||||||| ||| | || | |||||| | | || || ||||
Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 40191
>seq3424
Length=494560
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||||||||| ||||| ||||| || ||||| | || ||||| || ||
Sbjct 288839 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCT 288898
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || ||| || ||| ||| || || || | || || || |||
Sbjct 288899 GATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAG 288958
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369
|| | || || || ||||| || ||| | ||||| | | | ||||| |||||
Sbjct 288959 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTAT--CTGATTAC 289015
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||||| |||||||| ||| | || || ||||| | ||||| || ||
Sbjct 289016 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGG 289065
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || |||||||| ||||| ||||| || ||||| | || || ||| | ||
Sbjct 289523 ATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTCT 289582
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || || ||| ||| || || ||| | || || || |||
Sbjct 289583 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCAG 289642
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369
|| | || || || ||||| || ||| | ||||| | | | ||||| | | ||
Sbjct 289643 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTATCTG--ACTAC 289699
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || ||||| ||| | ||||||||||| | ||||| || ||
Sbjct 289700 AATATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGG 289749
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| |||||||| ||||| || ||||| ||||| | || || ||| | ||
Sbjct 290434 CATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 290493
Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | |||| || || || || || || ||||||||| | || || || |
Sbjct 290494 TGATACAATAGAAAATGTTAAGGCAAAG-ATTCAAGATAAGGAAGGCATTCCTCCAGATC 290552
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTAT 31369
| || | || || ||||| || || || ||||||| | | || | | || |||
Sbjct 290553 AACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGA-TGGGCGCACATTATCAGACTAT 290611
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || || |||||||| || ||||| || || || ||||| || || |||
Sbjct 290612 AATATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGGT 290662
Score = 82.4 bits (90), Expect = 7e-11
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| |||||||| ||||| ||||| || ||||| | || || ||| | ||
Sbjct 289295 ATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTCT 289354
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || || ||| ||| || || || | || || || |||
Sbjct 289355 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCAG 289414
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369
|| | || || || ||||| || ||| | ||||| | | | ||||| || ||
Sbjct 289415 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACACTAT--CTGACTAC 289471
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || ||||| ||| | || |||||||| | ||||| || ||
Sbjct 289472 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGG 289521
>seq1305
Length=286731
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || || ||||| || ||| |||| || || | |||
Sbjct 24984 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCC 24925
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | |||| || ||| | ||| || |||||||| | || || ||||||
Sbjct 24924 GATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAG 24865
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
|| ||| | || || ||||| ||||| | ||||| | | | || || || || ||
Sbjct 24864 CAACGTTTGATCTTTGCTGGTAAACAACTAGAAGA-TGGACGTACATTGTCTGACTACAA 24806
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||||| ||||| || | ||||| || ||| |||| | || ||||
Sbjct 24805 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTA 24756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445742389907280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |