Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_003266.2
Length=35994
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 354 2e-93
>seq3063
Length=7092
Score = 354 bits (392), Expect = 2e-93
Identities = 331/421 (79%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11214 GGTCACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAA 11273
||| || |||||||||||||| ||||| |||||| ||||| |||||| ||| |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11274 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGA 11333
|||||||||||| || | ||||||||||||||| | | || |||||||| ||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11334 CCTGCTGGAGGCCATTGTGCAGAACCCCACCAGCAAACCGCTGACGGCGCAGCTGTTCCT 11393
| | | || | | ||| ||||| | ||||| ||||| | |||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11394 GGTGGTGCAGCACAGTCGGGACAACGAGACTTTTAGGGAGGCGCTGCTGAATATCACCGA 11453
| ||||||||||| ||||||||||| | || ||||| |||||||| || || ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11454 GCCCGAGGGCCGCTGGCTTCTGGACCTGGTGAATATTCTGCAGAGCATCGTGGTGCAGGA 11513
|||||||||||||||||| || || || | || |||||||||||||| |||||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11514 GCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTTTCGGTGCTGAGTTTGGG 11573
|||| | || ||| | || ||| |||| ||||| |||| ||| |||| ||| ||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11574 CAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAA 11633
||||| ||||| | ||||| ||| | ||||| ||||| ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11634 G 11634
|
Sbjct 7092 G 7092
Score = 134 bits (148), Expect = 3e-27
Identities = 204/279 (73%), Gaps = 26/279 (9%)
Strand=Plus/Plus
Query 15866 CAGGACTCGGAGACGCGCGGCCACGGCGGCGGCAGCGGCCAT-AGCCAGC-ATGTCCCGC 15923
|||| | || |||| |||||| | || || || |||||||| || || ||| | |
Sbjct 407 CAGGTCCAGGCGACGAGCGGCCGCCGCAGCAGCCGCGGCCATTAGT--GCTATGACTCAG 464
Query 15924 CCGCGGCGAGGGAACGTGTACTGGGTGCGCGACGCCGCCACCGGTGTGCGCGTGCCCGTG 15983
|| | || ||||||||||||||||||||| | | ||| ||||||||||||||
Sbjct 465 GGTCGCAGGGGCAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTG 524
Query 15984 CGCACCCGCCCCCCTCGCAC-----TTG-AAGATGTTC--ACTTCG---CGA--TGTTG- 16029
|||||||||||||| |||| ||| |||| |||| | || |||||
Sbjct 525 CGCACCCGCCCCCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGT 584
Query 16030 ATGTGTCC-----CAGCGGCGAGGA--GAAGG-ATGTCCAAGCGCAAATTCAAGGAAGAG 16081
|||| ||| | |||||| | | |||| ||||||||||||||| |||| ||||||
Sbjct 585 ATGTATCCAGCGGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAG 644
Query 16082 ATGCTCCAGGTCATCGCGCCTGAGATCTACGGCCCCGCG 16120
|||||||||||||||||||| |||||||| |||||| ||
Sbjct 645 ATGCTCCAGGTCATCGCGCCGGAGATCTATGGCCCCCCG 683
Score = 125 bits (138), Expect = 2e-24
Identities = 136/177 (77%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 15477 CCCAGCAAGATGTACGGAGGCGCTCGCCAACGCTCCACGCAACACCCCGTGCGCGTGCGC 15536
|| |||||||||| || || || | |||||| |||||||| ||||||||||||
Sbjct 3 CCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGC 62
Query 15537 GGGCACTTCCGCGCTCCCTGGGGCGCCCTCAAGGGCCG-CGTGCGGTCGCGCACCACCGT 15595
||||||| |||||| ||||||||||| | ||| || | || | | ||||||||||||
Sbjct 63 GGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTG-GGCGCACCACCGT 121
Query 15596 CGACGACGTGATCGACCAGGTGGTGGCCGACGCTCGCAACTACA--CCCCCGCCGCC 15650
||| |||| || ||| |||||||| || || |||||||||| ||| |||||||
Sbjct 122 CGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCC 178
Score = 116 bits (128), Expect = 9e-22
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 16275 TGAGACCCGGCACCACGGTGGTTTTCGCGCCTGGCGAGCGGTCCGGCACGACATCCAAGC 16334
|| ||||||||||||| || ||||| |||| || ||||| ||| | || | |||||
Sbjct 841 TGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGC 900
Query 16335 GCTCCTACGATGAGGTGTACGGGGACGAGGATATTCTCGAGCAGGCGGCCGAGCGCCTGG 16394
|| || |||||||||||||| |||||||| | || |||||||| ||||||||| |
Sbjct 901 GCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCG 960
Query 16395 GCGAGTTTGCTTACGGCAAGCG 16416
| |||||||| ||||| |||||
Sbjct 961 GGGAGTTTGCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 115053312492648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |