Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 524 7e-144
seq1351 136 4e-27
>seq3345
Length=207354
Score = 524 bits (580), Expect = 7e-144
Identities = 1183/1761 (67%), Gaps = 29/1761 (2%)
Strand=Plus/Minus
Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864
|||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| | ||
Sbjct 113368 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAAACCCATTTTC 113309
Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924
|| ||| ||||| || || |||||| | || |||| ||| | | || ||| |
Sbjct 113308 CAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGTTTAGCAACATGTATGTTA 113249
Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984
| ||||||||||| |||||||| || ||||| || |||||||| | || | || ||
Sbjct 113248 AAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCCATCTGTA---TGGATGTT 113192
Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTA-- 37039
| | || |||||||| || ||||| || | | | |||| || | | | || | |
Sbjct 113191 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT-TTCTTTAGGAATTTTTTC 113133
Query 37040 AATGT--TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACAT 37097
||| | || ||||| ||||| | | | ||| ||| || || || | || |||||
Sbjct 113132 AATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCTTCATCCCACAA 113073
Query 37098 ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAA 37157
|| | | | || ||| || || | || || || |||| |||||||||||
Sbjct 113072 ATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAA 113013
Query 37158 TACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAAT 37215
||||||||| ||| |||| ||| | ||| | ||||||| || ||| | || | |
Sbjct 113012 GACTCTTCTTTGGTAAATAT-TTGAT-GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGA 112955
Query 37216 ATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGT 37275
||||| | ||||| ||||| |||||||| ||||| | || ||| | ||| ||||||
Sbjct 112954 ATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGAGAATTGCGCAAACCATGT 112895
Query 37276 GTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCAC 37335
| || | | ||| || || ||| ||||| | ||||| || | || ||||
Sbjct 112894 TTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCAC 112835
Query 37336 ATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCG 37395
|||||||| || || ||||||| || |||||| | | |||||| || | ||
Sbjct 112834 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 112775
Query 37396 TAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATT 37455
| ||| ||||| ||| ||||||| ||||| ||| ||||||| |||||||| || |||
Sbjct 112774 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 112715
Query 37456 TGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACA 37515
||| ||| | | | |||||| || || ||| | | | | || || | |||| ||
Sbjct 112714 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGAAATTCTCATCAACACAAACGCA 112655
Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGAT 37575
|| |||| ||||||||||| ||||| || ||||||||| || |||| || | | |
Sbjct 112654 TCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCT 112595
Query 37576 TCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTC 37635
|| || |||||| |||| | ||| || | ||| |||| ||||| | || || ||
Sbjct 112594 TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTT 112535
Query 37636 GTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGAA 37695
|| ||| | | || || | || ||||| ||||| | |||||| | | | |
Sbjct 112534 GTGATTTCTTTTAATTTTTTAAAATTAAATCTATTATTTTCAACAAACATGTTAAGTGCT 112475
Query 37696 ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTA 37755
|| || | || || || || || ||||||||||| | | |||| | || ||| ||
Sbjct 112474 ATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTG 112415
Query 37756 CAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAA 37815
|| ||||| || || |||| || || | ||| ||||||| ||| | ||||||| |
Sbjct 112414 CAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCA 112355
Query 37816 TCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCAT 37875
|| ||||| | || || || || || |||| ||| || || ||||| || ||||||
Sbjct 112354 TCCTTATACAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGACTTCCAT 112295
Query 37876 AAACTTCTT--GCTTTAACGATCGCTTT---AAt-ttttttCTTTGTTTCGTATTCTATA 37929
|| |||| ||| | || | | ||| ||| |||||||| ||| |||| |
Sbjct 112294 AA--CTCTTGAGCTCTGAC--TTGTTTTATAAATCGTTTTTCTT--CTTCATATTTGGCA 112241
Query 37930 TATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGACA 37988
||| | || || |||| || || | || || | || ||||| || |||||
Sbjct 112240 TAT-AGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACA 112182
Query 37989 CATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAA 38048
||| ||| ||| ||||||| |||||||| | || |||||| | ||| |||| ||||||
Sbjct 112181 CATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAA 112122
Query 38049 TGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAG 38108
||| ||| | ||| | | ||| |||||| || || ||||| |||| |
Sbjct 112121 GGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCCGTGTTCTTCTTTAAATCCAA 112062
Query 38109 AAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTT 38168
|| || ||||| || || ||||| || |||| |||||||| | ||| || || | |||
Sbjct 112061 GAATTCAAATATGTCTGCATGCCAAGGCTCTAAATAAATCGCAAATGCACCGGGACGTTT 112002
Query 38169 ATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTAT 38228
| || || |||| | |||||| | || || ||||| | ||| ||||| || ||||
Sbjct 112001 GTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAG 111942
Query 38229 ACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTAT 38288
|||||| || || || | || | ||| |||| ||||| ||||| || | | |
Sbjct 111941 ACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGT 111882
Query 38289 CGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAA 38348
|| ||||| ||||| ||| ||| || ||||| || ||||||||||| ||||||||
Sbjct 111881 ATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAA 111822
Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408
|||||||| || || || || || || | || | || || || | || |||
Sbjct 111821 AATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGCGGCCG 111762
Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468
|| || | || |||| |||||| ||||||| | || |||| || ||||
Sbjct 111761 CGGTGTGGCTGCTGAGAATAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCAT 111702
Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528
|||||| || | ||| || ||| || || | || ||||| |||| || || |||||
Sbjct 111701 ATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTCAT 111642
Query 38529 TAGCATATGTTGTGGTCTTTC 38549
||||| ||||| || |||||
Sbjct 111641 AAGCATGTGTTGAGGCCTTTC 111621
>seq1351
Length=825266
Score = 136 bits (150), Expect = 4e-27
Identities = 170/229 (74%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
||| |||| |||||| || ||||||||| ||||| |||||||||| ||||||||||||
Sbjct 602220 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 602279
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008
|||||||| |||||||| || | || || | ||| || || || |||| | |
Sbjct 602280 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGTGAAAAACGCT 602338
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
|| | || |||||||| |||||||||||| || ||||| ||||||| | ||| || |
Sbjct 602339 CCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACATGCTTGA 602398
Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATCTAAATC 12114
|||| | ||| || |||| ||||| | |||||||| |||| ||
Sbjct 602399 TAAAATGTTTCTCACAATCTT---TTAATGTCTCCCAATCTGCTAAGTC 602444
Score = 114 bits (126), Expect = 1e-20
Identities = 152/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| ||||||||| || || ||||||||||||| ||||||||||| | |||||||||
Sbjct 601408 ATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 601467
Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785
| |||||| || || || ||||||||||| || |||||||| || | || | ||||
Sbjct 601468 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCT 601527
Query 11786 CC--ATATACCT-TGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACG 11842
|| || || || | ||||| ||||| | | ||||| || || ||||| || ||
Sbjct 601528 CCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACA 601587
Query 11843 CATTCCATTGTTTCTATAGCGTTAAATAA 11871
||| | ||||| || || || |||||
Sbjct 601588 CATGGTAGAGTTTCAATTGCATTGAATAA 601616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468499564082960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |