Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 515 5e-141
>seq3345
Length=207354
Score = 515 bits (570), Expect = 5e-141
Identities = 1098/1622 (68%), Gaps = 41/1622 (3%)
Strand=Plus/Minus
Query 64819 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 64878
|||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 113397 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 113338
Query 64879 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 64938
|||||||||| ||||||| ||| | |||| ||| ||||| || ||| |||||
Sbjct 113337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 113278
Query 64939 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 64998
||| | || | || | ||| || || | |||||||||||| || || || ||||| |
Sbjct 113277 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 113218
Query 64999 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 65057
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 113217 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 113158
Query 65058 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 65114
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 113157 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 113099
Query 65115 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 65174
||| || || || |||| ||| || | | || ||| | | || ||||| |
Sbjct 113098 AGATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 113039
Query 65175 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 65234
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 113038 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 112979
Query 65235 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 65294
|| | ||| ||| | || || | |||||| ||||| || ||||||||||| || || | |
Sbjct 112978 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATC 112919
Query 65295 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 65352
|||| | ||| | | ||| ||||| || || || ||||| || | |||| | ||
Sbjct 112918 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCC 112861
Query 65353 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTAC 65411
|||| || | || || || ||||| | || || | ||
Sbjct 112860 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGAC 112801
Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471
||| |||||| ||||| ||||| || ||||||| ||||||||| || ||||||
Sbjct 112800 TC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 112742
Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531
||||| |||||||| ||||| || || | | ||| ||| | ||||| | || ||
Sbjct 112741 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 112682
Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591
| | | | | | | |||||| ||||| | || |||||||||||||| ||||||
Sbjct 112681 TAAGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 112622
Query 65592 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 65651
||||||||| |||| || ||| ||||| || | ||||||| |||||| ||| |||| |
Sbjct 112621 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 112562
Query 65652 TTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT 65708
|| || | |||| | ||||| ||||| | || || | ||| ||||| ||||
Sbjct 112561 TTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAAT 112505
Query 65709 CGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCA 65768
| | || | ||||||||||| | ||| | || || || || || || || || |||
Sbjct 112504 CTATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCA 112445
Query 65769 TTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 65825
| | || | | ||||| | | ||||||||||||||| ||||| || || || ||
Sbjct 112444 T---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCA 112388
Query 65826 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 65885
| ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||| ||||||
Sbjct 112387 AGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCA 112328
Query 65886 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 65945
|| || | || | ||||||||| | ||||| | || |||| | | | | |||
Sbjct 112327 GTCTCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGA--CTTGTTTTA 112270
Query 65946 T--ATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA- 66002
| ||| |||||| ||| ||| | ||| | | ||| || || ||| || || ||
Sbjct 112269 TAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCT-CCAAAGCAG 112211
Query 66003 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT---C 66059
| | | |||||||| |||| |||||||| | ||| || ||||||||
Sbjct 112210 TCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACT---TCATCCTTTTCT 112154
Query 66060 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGT 66119
|||| ||||||||| ||||| || ||||| | || ||| | ||||| | ||| |
Sbjct 112153 ACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATT 112094
Query 66120 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGT 66179
|| || || || || ||||| || | ||| | ||| | | || || |||||| ||
Sbjct 112093 TCTTCCTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGC 112034
Query 66180 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 66239
|| || || || || | | || || ||||||||||| || ||||||| ||||| ||
Sbjct 112033 TCTAAATAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCA 111974
Query 66240 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAG 66299
|| || ||||| |||||||||||||| | | |||||| || ||||| || || |
Sbjct 111973 GTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCT 111914
Query 66300 ATATAGCTTCCACTTGCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATT 66356
|| || || || | || || || || || |||||| || || || |
Sbjct 111913 ATGTAAGAACCCTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGAT 111857
Query 66357 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 66416
||||| |||||||| ||| ||||||| |||||| | || || || || ||||| || ||
Sbjct 111856 TTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTC 111797
Query 66417 AT 66418
||
Sbjct 111796 AT 111795
Score = 102 bits (112), Expect = 1e-16
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 66599 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658
||| |||||||| |||||||| || ||| ||||||||||||| ||||||||||| |||||
Sbjct 111270 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAATTGTA 111211
Query 66659 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709
| ||| |||| || |||| |||| | |||| | ||| ||||| | |||
Sbjct 111210 TTTAAAATCTCTATCATAAACAATAGCAGAGTCTAATTTGTCCTTGTTTTT 111160
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 66810 TTTTTTGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCC 66869
|| || || ||||| |||| ||| |||| |||||||| || || | ||||||||||||
Sbjct 110521 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 110462
Query 66870 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 66929
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 110461 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 110402
Query 66930 GTTACTCCATTATATATTCC 66949
||||| ||| |||||| ||
Sbjct 110401 GTTACACCAGAATATATGCC 110382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658137349167560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |