Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3463 214 2e-50 seq3424 129 6e-25 seq2787 127 2e-24 seq1305 111 2e-19 >seq3463 Length=282612 Score = 214 bits (236), Expect = 2e-50 Identities = 765/1171 (65%), Gaps = 44/1171 (4%) Strand=Plus/Plus Query 20330 CAATCTGCCGGTAATCGACCACACCGTCTTCCCAAGTGCCGGCGACGGGACCGGTGGCCG 20389 |||||| || || || ||||| ||||||| |||||| || ||| || || || || Sbjct 182046 CAATCTCCCTATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGT 182105 Query 20390 TGCCCGCGAAAGGA---TTATCACTATCGCTCTTCACACCGGTCCAACCGCGCCCGTACA 20446 |||| | ||| ||| || || | | | || || |||||||| || || |||| Sbjct 182106 TGCCTGTGAAGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACA 182165 Query 20447 TTGCTACACCCAGTGCAATTTTACTTTTTGGT-ACGTGTTGCGCGAGCAACGCTTCTACG 20505 | || ||||| | | |||| || ||| | || ||||| ||||| || ||| Sbjct 182166 TAGCAACACCTACTACAATCTT-CTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACT 182224 Query 20506 GCACGATCTGCGCAATAAGGTTCGTCGGGTTTCCAGGCGGGTGCAAACAATGCGGTTTGA 20565 | || | |||| ||| | ||| ||||| || || || |||||| |||||| Sbjct 182225 CCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGA 182284 Query 20566 TGTCCCAGATCCGTAGTGGACCAGGCTCCTTTGAAATCGTACGACATTAAGAATATGGTA 20625 ||||| ||| | | ||||||||||| ||||| ||||| ||| ||||| || | Sbjct 182285 TGTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGA 182344 Query 20626 TCGAGGTATTTTTGCGCTTCGGTGTAATCGACCACAGCAATCTTATCGTCGCCCGCGCTT 20685 || | || ||||| || | | || || || || || ||||| || ||||| Sbjct 182345 TCCATATAATTTTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTA 182404 Query 20686 ATCGCGCTCGTCAACAGATAGTA---ACGATTGTGATGTATGCCGAGGGC--GTCGAGCA 20740 || || || || || | || ||| | | || ||| || |||||||| Sbjct 182405 ATAGCAGAAGTTAATTCGTATTTCTTACCATTCTTA-----GCTGAGAGCTCGTCGAGCA 182459 Query 20741 TGCCGCGAAGTTCACGCAGCAGGATCGTGTACGTGGCTCGATCGCGTTCGGCGTCGCCGA 20800 | | || | ||| || || | || | | ||| ||| | | |||| Sbjct 182460 TCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCGA 182516 Query 20801 CATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAAAGA 20860 | ||||| || || ||||| || || ||||||||||| || || || ||||| |||| Sbjct 182517 GGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGA 182576 Query 20861 ATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAA-CGT-TTGGCGCACGATCTT 20918 ||||||| ||| ||| |||| | || || | | ||| ||| || | | ||| || Sbjct 182577 ATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTA-GAT-TT 182634 Query 20919 GTCGTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACACTTT 20978 ||| | | ||| || || || | ||| ||||| || || ||||| || | | || Sbjct 182635 GTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTT 182694 Query 20979 GAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGGTTC 21038 | | ||| || ||| | ||| | ||||||||||||||||||||| || || Sbjct 182695 CAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTC 182754 Query 21039 GTTCCATGCGCTGACA--CCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGAATG 21096 ||||||| | |||| ||||| || ||||| |||| || ||||| |||||||| || Sbjct 182755 GTTCCAT--GAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATT 182812 Query 21097 GCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCCGGG 21156 | || || ||||| ||||||| || || || || | |||| ||||||||| | Sbjct 182813 GAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCG 182872 Query 21157 A-CACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTACAA 21215 | | ||||| | | ||| |||||||| || || ||||| || || | || ||||| | Sbjct 182873 ATCTCTTTTAAAC-TATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAG 182931 Query 21216 CAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACACC 21275 |||||| | | || ||| | || | ||| ||||| || | | ||||| ||||| Sbjct 182932 CAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACC 182991 Query 21276 CCATTCGACAAAGTATGCTCCAATGATCTTGTCCGAGCGCTTT--TCGAAACGTTTATTG 21333 |||||| || ||||| || || | | ||| ||| || ||| | ||| | ||||| Sbjct 182992 CCATTCTACGAAGTAGGCACCCA-CAACTTTTCC-AGATGTTTGCTTGAACGGCTTATTT 183049 Query 21334 TTTTCGAGATAATCGTAGA--CGAGCGGCGCGAGATGCGAGCCGTCCGTGTCGGCCACGA 21391 ||||| ||| ||| | | || || | | ||| || || || |||||||||| Sbjct 183050 TTTTC-TCCCAAT-GTATATTCCAGAGGAGGTAAATGACTTCCATCGGTATCGGCCACGA 183107 Query 21392 CGACTTTAACCGGTGCGCT-AGTCGAA---CAGCCGTCGACGTTGCACAGTTTCACAGTC 21447 | | || ||||| | | | | ||| ||||||||| | ||||| |||| ||| ||| Sbjct 183108 CAATTT----CGGTGGGATCACTTGAACTGCAGCCGTCGTCATTGCAAAGTTCCACTGTC 183163 Query 21448 ATATCGTACTTGCCGCCCTTAGTAACGGGAA 21478 || | ||| | || || || | |||||||| Sbjct 183164 ATTTGGTATCTTCCACCTTTCGAAACGGGAA 183194 >seq3424 Length=494560 Score = 129 bits (142), Expect = 6e-25 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || |||||||||||| || | |||||||| || || || ||||| || | Sbjct 290205 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 290146 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| || | ||||| || || || || || | ||||| | ||| ||||| ||||| Sbjct 290145 AATGTGCGTCCA-TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGG 290087 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 |||||||| ||||| ||| | |||| ||| | | ||| | |||||| | | ||||| Sbjct 290086 AATGCCTTCCTTGTC-TTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCA 290028 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | ||| | || ||||| ||||| ||||| || || |||||||| Sbjct 290027 CTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979 Score = 116 bits (128), Expect = 4e-21 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGA 139608 |||| || ||||| | ||||| || |||||||| |||||||| || ||| | || | Sbjct 289281 CGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCA 289222 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| |||||||| || ||| | || || | || || || ||||| ||||||||||| Sbjct 289221 -TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTT 289163 Query 139669 GTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727 ||| ||| |||||| ||| | | ||| | ||| || | | |||||| || | || | Sbjct 289162 GTCT-TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCACTTCCAATGTGA 289104 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| |||| || ||||| ||||||||||| Sbjct 289103 TAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| || |||||||||||| || | |||||||| || || || ||||| || Sbjct 290434 GCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGA 290375 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || ||||| || | ||||| || || || || || | ||||| | ||| ||||| |||| Sbjct 290374 CAATGTGCGTCCA-TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 290316 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCC 139714 | |||||||| || || ||| | |||| ||| | | ||| | ||| || | | ||| Sbjct 290315 GAATGCCTTCCTTATC-TTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 290257 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || | || || || |||| || ||||| || |||||||| Sbjct 290256 ACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290207 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || | || ||| ||||||||||| | ||||| || || || || ||||| || Sbjct 288837 CCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAG 288778 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| | ||||| | || || || || | || || | ||| ||||| ||||| Sbjct 288777 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 288718 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| | |||| |||| | ||| | ||| || | | ||||| Sbjct 288717 ATGCCTTCCTTGTCT-TGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCAC 288659 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || || ||||||||||| |||||||| Sbjct 288658 TTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 ||||| || || ||||| || || || | ||||| || | ||||| ||||| || || Sbjct 289719 GTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCA-TCTTCAAGCTGCTTTCC 289661 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 |||| | || || | ||||||||| || || ||||| ||||| || ||| |||| | | Sbjct 289660 AGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCC-TGAATTTTCGCCT 289602 Query 139687 TAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 || | | ||| | ||| || | | ||||| || | || | |||||||| |||| | Sbjct 289601 TAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTCTTGCCAGTCAGTG 289542 Query 139746 TTTTTACGAATATTTGCAT 139764 | ||||| ||||||||||| Sbjct 289541 TCTTTACAAATATTTGCAT 289523 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | ||||| || | ||||| ||||| ||||| || || || Sbjct 289977 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGAT 289918 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | || || || || || |||||| | || || | ||| || || ||||| Sbjct 289917 AGTGTACGTCCA-TCCTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGG 289859 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 |||||||| || || ||| |||| | ||| | | ||| | |||||| | |||||| | Sbjct 289858 AATGCCTTCCTTATCT-TGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAA 289800 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | || | |||||||| |||| || || || ||||||||||| Sbjct 289799 CTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCACAAATATTTGCAT 289751 >seq2787 Length=76071 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||||| ||||| |||| |||||||||||||| ||||| || || | Sbjct 40645 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 40586 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || |||||| |||| |||||||| ||||| || || Sbjct 40585 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 40526 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || ||||| || ||| | || | |||| | ||| | ||||| | |||||||| Sbjct 40525 ATACCCTCTTTATCT-TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 40467 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | |||||||| || | || || || |||||||||||| Sbjct 40466 CTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 40418 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | |||||||| | ||||| |||||||| ||||| || || | Sbjct 40189 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 40130 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| | ||||| | || || || ||| | || |||||||| ||||| ||||| Sbjct 40129 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 40070 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||||||||| |||||| ||| | | ||| | |||||| | | || || Sbjct 40069 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 40010 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || || || | ||||| || || ||||||||| Sbjct 40009 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 39962 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| ||||| ||||||||||| ||||| || Sbjct 39733 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 39674 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||| | || || ||||| | |||| |||||| ||||| ||||| Sbjct 39673 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 39614 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| |||| | ||||| | ||| | || |||| || || || Sbjct 39613 ATGCCTTCCTTGTC-TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 39555 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | ||||| || || || ||||| Sbjct 39554 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 39507 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || ||||||| || |||||||| || || || || || | Sbjct 41101 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 41042 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || ||||||||||| |||| |||||||| ||||| ||||| Sbjct 41041 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 40982 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | |||| | || || || |||| | ||||| || Sbjct 40981 ATTCCTTCCTTATCT-TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAAC 40923 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | ||||| || ||||||||||| Sbjct 40922 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 40875 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | |||||||| | || |||||||| ||||| || ||||| | Sbjct 40873 CCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGAC 40814 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | || || |||||| | || |||||||| || || || || Sbjct 40813 AAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGG 40754 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || || || ||||| ||| | | || | |||||| | || || || Sbjct 40753 ATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACT 40694 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||| || ||||| ||||| || |||||||||||| Sbjct 40693 TCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCATA 40646 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||||||||| || |||||||| | || |||||||| ||||| || || || Sbjct 41329 CCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAA 41270 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | || || ||||| || ||||| | || |||||||| ||||| || || Sbjct 41269 AGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 41210 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || |||||||| ||| || ||| | | ||| | ||||| | ||| || || Sbjct 41209 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 41150 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | || | || || || |||| || ||||| || || |||||| || Sbjct 41149 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATACCT 41099 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||||| || | ||||| |||||||| |||||||| || | Sbjct 41557 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 41498 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || | ||||||||||||| |||| ||||| || || || || || Sbjct 41497 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 41438 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || || || ||| || || | | ||| | ||||||| ||||||||| Sbjct 41437 ATGCCCTCCTTATCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACC 41378 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | || | ||||| || || | || || || || || |||||| || Sbjct 41377 TCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCATACCT 41327 >seq1305 Length=286731 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 || || || ||||||||||| || || || ||| | || | ||||| || |||||||| Sbjct 24788 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCA-TCTTCTAGTTGTTTACC 24846 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 |||| |||||| ||||||||| || || || || ||||| || || |||||| ||| Sbjct 24847 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTT 24906 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 || | ||| | || |||| || ||||||||| | ||| | || || || || | || Sbjct 24907 TACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGT 24966 Query 139747 TTTTACGAATATTTGCAT 139764 || ||||| |||||||| Sbjct 24967 CTTGACGAAAATTTGCAT 24984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496037280752800