Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 143 3e-29
>seq1351
Length=825266
Score = 143 bits (158), Expect = 3e-29
Identities = 168/225 (75%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
||||||| ||| ||||||||| || ||||| || ||||| ||||||| ||||||||
Sbjct 601394 CCTCATCCCTAGAAATAAGTTCATTACTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 601451
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
||| ||||||||||||| |||||| || || || ||||||||||||||||| |||||
Sbjct 601452 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAA 601511
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
|| |||| ||||||||||| | ||| | ||| | ||||| | | ||||| ||
Sbjct 601512 AGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 601571
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| || || |||| | | | |||||||| ||||| |||||
Sbjct 601572 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 601616
Score = 105 bits (116), Expect = 6e-18
Identities = 178/255 (70%), Gaps = 7/255 (3%)
Strand=Plus/Plus
Query 14111 AAATAAATATTC-CTTCTCTTTAGTA---CTTGAAATGTATGTATCAATAAGTAAGCTAT 14166
||| ||||||| | |||| |||| | ||| || ||||| ||||| | ||| |
Sbjct 602195 AAACAAATATTTACCTCTCCTTAGGATCCCTT---ATATATGTGTCAATTAATAAAGAGT 602251
Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226
|||| || || || | ||||||||||| || ||||||||||| ||||| || ||||| |
Sbjct 602252 ACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAG 602311
Query 14227 ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14286
| ||| || || |||| | || |||| || |||||||| ||||||||| ||
Sbjct 602312 TCACTTGAACCTCTTGTGAAAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAG 602371
Query 14287 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCC 14346
| ||||| ||||| || | | || ||||| | || ||| || || | | | | ||
Sbjct 602372 CCGCAAAGAATGCTAAAACATGCTTGATAAAATGTTTCTCACAATCTTTTAATGTCTCCC 602431
Query 14347 AATCGGATAAATCCT 14361
|||| | ||| ||||
Sbjct 602432 AATCTGCTAAGTCCT 602446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479702160650600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |