Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 143 3e-29
>seq1351
Length=825266
Score = 143 bits (158), Expect = 3e-29
Identities = 168/225 (75%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
||||||| ||| ||||||||| || ||||| || ||||| ||||||| ||||||||
Sbjct 601394 CCTCATCCCTAGAAATAAGTTCATTACTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 601451
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
||| ||||||||||||| ||| || || || || ||||||||||||||||| |||||
Sbjct 601452 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAA 601511
Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859
|| |||| ||||||||||| | ||| | ||| | ||||| | | ||||| ||
Sbjct 601512 AGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 601571
Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| || || |||| | | | ||||| ||||||||||||||
Sbjct 601572 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 601616
Score = 113 bits (124), Expect = 4e-20
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989
|| ||||| ||||| | ||| ||||| || || || | ||||| ||||| || |||
Sbjct 602227 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 602286
Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049
|||||||| || || || ||||| | | ||| ||||| |||| | || |||||
Sbjct 602287 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAG 602346
Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109
|| |||||||||||||||||| ||| ||||| ||||| || | | || ||||| | |
Sbjct 602347 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACATGCTTGATAAAATGT 602406
Query 14110 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149
| ||| || || | | | | |||||| ||||| ||||
Sbjct 602407 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 602446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478563022010760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |