Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 533 2e-146
seq1351 105 9e-18
>seq3345
Length=207354
Score = 533 bits (590), Expect = 2e-146
Identities = 1094/1614 (68%), Gaps = 25/1614 (2%)
Strand=Plus/Minus
Query 70781 TTATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGAT 70840
||||||| | ||||| | ||||||||||| | | | ||| | ||| || |||| |
Sbjct 113397 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 113338
Query 70841 AGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 70900
||||||| |||||||||| ||| | |||| ||| ||||| || ||| |||||
Sbjct 113337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 113278
Query 70901 AATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCC 70960
|||| |||| | || | || || || | || |||||||| || || || ||||| |
Sbjct 113277 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 113218
Query 70961 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 71019
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 113217 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 113158
Query 71020 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCA-ATAAT 71075
| |||| | |||| |||| ||| | |||| | || |||||| | || | |||||
Sbjct 113157 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGT-TGTATATAAT 113100
Query 71076 CCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGG 71135
|||||| || ||||||| ||| || | | || ||| | | || |||||| |
Sbjct 113099 AAGATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 113040
Query 71136 ATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGG 71195
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||
Sbjct 113039 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 112980
Query 71196 TTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255
||| | || ||| | || || | |||||| ||||| || ||||||||||| || || |
Sbjct 112979 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTAT 112920
Query 71256 CAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCA 71315
||||||| ||| | | ||||||| | || || ||||| || | |||| | |||
Sbjct 112919 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCA 112860
Query 71316 AAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGA 71375
||| || | || || || | || ||
Sbjct 112859 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACT 112800
Query 71376 TCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGC 71435
||| |||||| ||||| ||||||||||| |||| ||||||||| || ||||||||
Sbjct 112799 CCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGC 112740
Query 71436 TCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAA 71495
||||||||||| ||||| || || | | ||||||| | ||||| | || || |
Sbjct 112739 ACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTA 112680
Query 71496 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCT 71555
| | | | | | |||||| ||||| | || ||||| |||||||| ||||||||
Sbjct 112679 AGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 112620
Query 71556 GTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 71615
|||||| |||| ||| ||| ||||| || | ||||||| |||||| ||| |||| |||
Sbjct 112619 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 112560
Query 71616 ATTGAGATTTCTGACTATTA--CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTC 71673
|| | |||| ||| | | ||||| | || |||| ||| ||||| ||||||
Sbjct 112559 GTTTAAATTT-TGAGTTACAATCTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAATCTA 112502
Query 71674 CCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 71733
|| | ||||||| ||| | || | || || || || || || || || ||||
Sbjct 112501 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT-- 112444
Query 71734 GCATCGGCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790
| || | | ||||| | || |||||||||||||| ||||| || || || || | |
Sbjct 112443 -CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGA 112385
Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850
|||| ||||||||||||| ||||||| ||||||||||| | || | || ||||||||
Sbjct 112384 TTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTC 112325
Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTAT 71910
|| | || | ||||||||| | ||||| | || |||| | | | || | ||
Sbjct 112324 TCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTATAAAT 112265
Query 71911 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-C 71969
| |||||| ||| |||| | ||||| | ||| || || ||||| ||||| | |
Sbjct 112264 CGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGC 112206
Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029
| |||||||| |||| |||||||| | ||| || |||| | | ||||| |||
Sbjct 112205 GAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTT 112146
Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089
|||||| ||||| || ||||| | || ||| || ||||| | ||| || || ||
Sbjct 112145 CATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 112086
Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149
|| || ||||| || | ||| | ||| | | || || | |||||| || || || ||
Sbjct 112085 ACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAATA 112026
Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209
|| || | | || || ||||||||||| || ||||||| ||||| || || || ||
Sbjct 112025 AATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTT 111966
Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269
||| |||||||||||||| | | |||||| || | ||||| || || | || ||
Sbjct 111965 ATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGA 111906
Query 72270 TCCACTG-GCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 72326
|| ||| || | || | || || || |||||| || || || |||||| ||
Sbjct 111905 ACC-CTGAGCTCTGATGCAATGTGTAT--GTAAACCTATGCCACCAGCAGATTTAGAAAT 111849
Query 72327 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
|||||| ||| ||||||| |||||| | || || || || ||||| || ||||
Sbjct 111848 TAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 111795
Score = 93.3 bits (102), Expect = 6e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620
||| || ||||| |||||||| || ||| ||||||||||||| ||||||||||| |||||
Sbjct 111270 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAATTGTA 111211
Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671
| ||| |||| || |||| |||| | || | | ||| ||||| | |||
Sbjct 111210 TTTAAAATCTCTATCATAAACAATAGCAGAGTCTAATTTGTCCTTGTTTTT 111160
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 72772 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831
|| || || || || |||| ||| |||| ||||||||||| || | ||||||||||||
Sbjct 110521 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 110462
Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 110461 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 110402
Query 72892 GTTACTCCATTATATATTCC 72911
||||| ||| |||||| ||
Sbjct 110401 GTTACACCAGAATATATGCC 110382
>seq1351
Length=825266
Score = 105 bits (116), Expect = 9e-18
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610
|| |||| |||||||||||| | |||||||| |||||||| || ||||||||||| | |
Sbjct 602570 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 602629
Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658
|| ||||| ||||||| |||||||| |||||||| | | ||||||
Sbjct 602630 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTT 602677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671103050764840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |