Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 141 7e-29
seq1305 118 8e-22
seq3424 111 1e-19
>seq2787
Length=76071
Score = 141 bits (156), Expect = 7e-29
Identities = 163/218 (75%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || || ||||| || || |||||||| || || || || ||| | | |||||
Sbjct 39718 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCT 39659
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| ||||| || |||||| | |||||||||||||| || ||||| ||||| |||||
Sbjct 39658 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 39599
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
||||||| |||||| |||| || |||||| | ||| || || || |||||||||
Sbjct 39598 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 39539
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369
||||| || || ||||| ||||| || ||||| |||||
Sbjct 39538 TTACCCGTAAGTGTTTTCACAAAGATCTGCAT-TTTGA 39502
Score = 118 bits (130), Expect = 8e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || | | ||||| || | || || |||||||| |||||||| ||
Sbjct 40189 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 40130
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | ||||||||||| ||||| || | || | ||||||||| || |||
Sbjct 40129 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 40070
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||||||||| ||||| ||| || ||| |||| || || || | ||| ||
Sbjct 40069 ATGCCTTCTTTGTCTTGGATTTTAGCT-TTCACATTTTCAATTGTGTCAGAAGCTTCAAC 40011
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| ||||| ||||| || || || ||||| ||||| |||||||||
Sbjct 40010 TTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 39962
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||||| || | | |||||||||||||| || |||||||| |||||||| ||
Sbjct 40645 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 40586
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | ||||||| || |||||||| | || | ||||||||| || |||
Sbjct 40585 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 40526
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || ||||| || ||| || ||||||| |||| ||||| || || ||
Sbjct 40525 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 40466
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || || || || ||||| || || || ||||| |||||||||
Sbjct 40465 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 40418
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || |||||||| || ||||| || || ||||| || || | | | |||||
Sbjct 41083 ACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 41024
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| |||||| |||||| | || | ||||||||| || ||||||||||| || || |
Sbjct 41023 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 40964
Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|| || ||| || ||| |||| ||||| || || || || || || || |||||
Sbjct 40963 ATCTTAGCT-TTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTT 40905
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| ||||| ||||||||
Sbjct 40904 TCCAGTAAGTGTTTTGACAAATATTTGCAT 40875
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
||||| || ||||| || ||||| || || |||||||| | | | | | |||||
Sbjct 40855 ACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCC 40796
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
||||| || ||||| | || | |||||||||||| || || || || || ||
Sbjct 40795 AATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGT 40736
Query 15275 ATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||||| ||| || ||| | || || || || |||||| || | ||||||||| ||
Sbjct 40735 ATTTTAGCT-TTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 40677
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| |||| ||||| ||||| |||||||||
Sbjct 40676 TCCAGTCAATGTTTTGACAAATATTTGCATA 40646
>seq1305
Length=286731
Score = 118 bits (130), Expect = 8e-22
Identities = 149/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 15167 GTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTTCTAATTGTTTGC 15224
||||| || ||||| |||||||| || | ||| || | ||||||| |||||| |
Sbjct 24788 GTGGATTCCTTTTGAATGTTGTAGTCAG--ACAATGTACGTCCATCTTCTAGTTGTTTAC 24845
Query 15225 CAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT-GCTC 15283
|||| | ||||||||||| ||||| |||||| ||||| || || ||||| |||
Sbjct 24846 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCT- 24904
Query 15284 TTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGA 15343
|||||| ||||||| |||||| || || || | ||||||||||||||| || ||
Sbjct 24905 TTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGG 24964
Query 15344 GTTTTTACAAAAATTTGCAT 15363
|| || || |||||||||||
Sbjct 24965 GTCTTGACGAAAATTTGCAT 24984
>seq3424
Length=494560
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | ||| | ||| | |||||||| || ||||| || || || || || |
Sbjct 290661 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAT 290602
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | | | | ||||| | ||| || || ||| | |||| | |||||| || |||
Sbjct 290601 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290542
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||| || || ||| ||||| ||| ||| ||||||| ||||| | ||| ||
Sbjct 290541 ATGCCTTCCTTATCTTGAATCTTTGC-CTTAACATTTTCTATTGTATCAGAAGCTTCCAC 290483
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || ||||| || ||||| || |||||||||||||||||
Sbjct 290482 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435
Score = 100 bits (110), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
|||||||||| | | ||||||||||| | || || || || || || || || ||
Sbjct 290435 TGCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCG 290376
Query 15195 TTAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTT 15252
| ||| || | ||||| | ||| || || ||| | |||| | |||||| ||
Sbjct 290375 --ACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGG 290318
Query 15253 TGGAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTT 15311
||||| ||||| || || ||| ||||| ||| ||| ||||||| ||||| | ||
Sbjct 290317 AGGAATGCCTTCCTTATCTTGAATCTTTGC-CTTAACATTTTCTATTGTATCAGAAGCTT 290259
Query 15312 CTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || || || || || ||||| || ||||| || |||||||||||||||||
Sbjct 290258 CCACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290207
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | | ||||||||||| | || || || || || || || || ||
Sbjct 290205 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCG-- 290148
Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| ||| || | ||||| | ||| || || ||| | |||| | |||||| || |
Sbjct 290147 ACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 290088
Query 15255 GAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313
|||| ||||| ||||| ||| ||||| ||| ||| ||||||| || || | ||
Sbjct 290087 GAATGCCTTCCTTGTCTTGAATCTTTGC-CTTAACATTTTCTATTGTGTCAGAAGCCTCC 290029
Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || |||||||| ||||| || |||| ||||| ||||||||||||||
Sbjct 290028 ACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| | || |||| || | || || ||||| || ||||||||||| |
Sbjct 289065 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 289006
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | ||||| | || || ||||| | || | | ||| || || |||
Sbjct 289005 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 288946
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTA-CAATTTCTATGGTATCGCTATTTTCTAC 15315
||||| ||||| || |||||| | ||||| || |||| || ||||| | || ||
Sbjct 288945 ATTCCCTCTTTATCCTGAATTTT-CGCTTTAACATTTTCAATTGTATCAGAAGGCTCAAC 288887
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || || || || ||||| || ||||| |||||||||||
Sbjct 288886 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839
Score = 82.4 bits (90), Expect = 6e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||| | ||||| || || | || | | |||||||| ||||| |||||||||
Sbjct 289221 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 289162
Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328
|| |||||| ||| ||| ||||||| ||||| | || || || || || ||
Sbjct 289161 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCACTTCCAATGTGATA 289102
Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || ||||| || |||||||| ||||||||
Sbjct 289101 GTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362160179819769
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