Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1351 104 2e-17 >seq1351 Length=825266 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| || ||||||||||| | ||||||||| | |||||| || || |||||| Sbjct 601432 CCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAAT 601491 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT 13330 ||||| |||||||||||||| || || | | ||| ||| | ||| | || || | Sbjct 601492 ATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCG 601551 Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTA 13390 ||||||| | ||||||| ||| || | ||||| || | | |||| ||||| || Sbjct 601552 ATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTG 601611 Query 13391 AATAA 13395 ||||| Sbjct 601612 AATAA 601616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430959766555218