Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 210 5e-49
seq2787 196 1e-44
seq1305 152 1e-31
seq1351 107 4e-18
seq4254 100 7e-16
seq3342 96.9 8e-15
>seq3424
Length=494560
Score = 210 bits (232), Expect = 5e-49
Identities = 190/238 (80%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| ||||| ||||| |||| ||||| ||||| || |||||||| |||||||||||
Sbjct 289759 TATTTGCATTCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATT 289700
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
||||||||||| || | || ||||| || || |||||||||||||| || || || ||
Sbjct 289699 GTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTG 289640
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
||| || || || || |||||||||||||| || || || |||||||| | |||||
Sbjct 289639 ATCTGGGGGAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGA 289580
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| ||| || || | ||| |||||||| ||||| ||||| ||||||||||| ||||||
Sbjct 289579 AGCTTCCACTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522
Score = 205 bits (226), Expect = 2e-47
Identities = 184/231 (80%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | |||||||| |||||| |||||||||||||||||||| |||||
Sbjct 289980 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCT 289921
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
||||| || | || || || ||||| |||||||||||||| ||||| ||||| || |||
Sbjct 289920 GATAGTGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 289861
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| ||||| || || || |||||||| | || || || ||
Sbjct 289860 GGAATGCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 289801
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || ||||| |||||||| ||||| ||||| || |||||||| ||||||
Sbjct 289800 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCACAAATATTTGCATT 289750
Score = 203 bits (224), Expect = 7e-47
Identities = 197/252 (78%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368
|||||| || | ||||| ||||| ||||| |||| |||||||| || || ||||||
Sbjct 289086 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGAT 289030
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
||||||||||| || || |||||||| || | || ||||| || || ||||||||||||
Sbjct 289029 TCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 288970
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || || || ||||| || || ||||| |||||||||||||| || ||||| ||||||
Sbjct 288969 ATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTT 288910
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||||| ||| || || || | || |||||||| ||||| ||||| |||||
Sbjct 288909 TCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACG 288850
Query 104549 AATATCTGCATT 104560
|| || ||||||
Sbjct 288849 AAAATTTGCATT 288838
Score = 194 bits (214), Expect = 4e-44
Identities = 195/252 (77%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368
|||||| || | ||||| ||||| ||||| |||| ||||| || || || || |||
Sbjct 289542 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGAT 289486
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||||||||| ||||||||||| || | || ||||| || || ||||||||||||
Sbjct 289485 TCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 289426
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || || || ||||| || || || || |||||||||||||| || || || ||||||
Sbjct 289425 ATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTT 289366
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||||| || ||| || || | || |||||||| ||||| ||||| ||||||
Sbjct 289365 TCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACA 289306
Query 104549 AATATCTGCATT 104560
|| || ||||||
Sbjct 289305 AAAATTTGCATT 289294
Score = 187 bits (206), Expect = 6e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || || || | || || | || || |||||||| || ||||||||||| ||
Sbjct 289296 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCT 289237
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || |||||||| |||||||| ||||||||||| ||||||
Sbjct 289236 GACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGA 289177
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || ||||| ||||| || |||||||||| ||||| || ||
Sbjct 289176 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCC 289117
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | ||| ||||| || ||||| ||||| ||||||||||| ||||||
Sbjct 289116 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289066
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| || || || || || || | |||||||||||||| ||||||||||| |||
Sbjct 290661 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAT 290602
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| || | || ||||| ||||| ||||| || ||||| || || |||||||| |||||
Sbjct 290601 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290542
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| ||||| ||||||||||| || |||||||||| ||||| || ||| ||
Sbjct 290541 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 290482
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| | || ||||| || ||||| ||||| |||||||| || |||||
Sbjct 290481 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435
Score = 183 bits (202), Expect = 7e-41
Identities = 179/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| | | |||| ||| || ||||| || ||||| |||||||||||
Sbjct 290436 ATGCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC 290377
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || | || ||||| ||||| ||||| || ||||| || || |||||||| |||
Sbjct 290376 GACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 290317
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| ||||||||||| || |||||||||| ||||| || |||
Sbjct 290316 GGAATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 290257
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| | || ||||| || ||||| ||||| |||||||| || ||||||
Sbjct 290256 ACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 290206
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||||||| | | |||| ||| || ||||| || ||||| |||||||||||
Sbjct 290208 ATTCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC 290149
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || | || ||||| ||||| ||||| || ||||| || || |||||||| |||
Sbjct 290148 GACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 290089
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||||||||| || |||||||||| || || || ||
Sbjct 290088 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCC 290029
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | |||||||| || ||||| | |||||| ||||| || |||||
Sbjct 290028 ACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 163 bits (180), Expect = 7e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || ||||| | | |||| || || |||||||| ||||| |||||||||||
Sbjct 288840 ATTCCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCT 288781
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| | ||| ||||| || |||||||| || |||||||| |||
Sbjct 288780 GAGAGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGA 288721
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||||||||| ||||| ||||| | ||||| || |||
Sbjct 288720 GGGATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCC 288661
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || || ||||| | |||||||| || || |||||
Sbjct 288660 ACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611
>seq2787
Length=76071
Score = 196 bits (216), Expect = 1e-44
Identities = 164/201 (82%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| ||||||||||||||||| ||||| | |||||||| | ||| ||||||
Sbjct 39703 GTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCA 39644
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | | |||||||| ||||| || ||||| || || ||||| || ||||||
Sbjct 39643 GCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTT 39584
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | |||||| |||||| || || | ||||| || ||||| |||||||||
Sbjct 39583 ACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGTAAGTGTT 39524
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| ||||| ||||||||||||
Sbjct 39523 TTCACAAAGATCTGCATTTTG 39503
Score = 192 bits (212), Expect = 1e-43
Identities = 174/219 (79%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|||| | ||||| ||||| |||||||| || ||||||||||| ||||||| || |
Sbjct 39952 AGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGG 39893
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| |||||||||||||||||||||||||| |||||||||||||| || || || || |||
Sbjct 39892 CCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCT 39833
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|| || || |||||||| || |||||||| | || ||| || |||||||||| ||
Sbjct 39832 TTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTG 39773
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || ||||| || || ||||| |||||||||
Sbjct 39772 ATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| | |||||||| || || ||||||||||| || || || ||||||
Sbjct 40192 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 40133
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||||| ||| || || |||||||| || | |||||||| |||
Sbjct 40132 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 40073
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || || || || ||||| |||||||| | || || || |||
Sbjct 40072 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 40013
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||| ||||| || || ||||| |||||||| ||||| || |||||
Sbjct 40012 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963
Score = 168 bits (186), Expect = 2e-36
Identities = 180/237 (76%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| || || |||| || | ||||||||||| | ||||| || ||||| || ||
Sbjct 40427 TATTTGCATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTT 40368
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|||||||| || || | ||| ||||| | ||| || |||||||| || || | ||| ||
Sbjct 40367 GTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTG 40308
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
|||||| || || || ||||| || || || || |||||||||||||| | |||||
Sbjct 40307 ATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGA 40248
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| ||||| || ||||| ||||| ||||||||
Sbjct 40247 GGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191
Score = 168 bits (186), Expect = 2e-36
Identities = 180/237 (76%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| || || |||| || | ||||||| ||| | ||||| ||||| || || ||
Sbjct 40655 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTT 40596
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|||||||| || || | ||| |||||||| || || |||||||| || || | |||||
Sbjct 40595 GTAGTCAGACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTG 40536
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
||| || || || || |||||||| |||||||| || ||||||||||| | ||| ||
Sbjct 40535 ATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 40476
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| || || |||||||| || || ||||| || |||||||| |||||
Sbjct 40475 TGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||||| | || | || || |||||||| ||||| ||||||
Sbjct 41104 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 41045
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| |||||||| ||||| || || || | |||||||| |||
Sbjct 41044 GACAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 40985
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| |||||||| ||||| |||||||| ||||| |||||||| | ||| || || ||
Sbjct 40984 GGAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 40925
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || || || || |||||||||||||| |||||||| ||||||
Sbjct 40924 ACTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874
Score = 159 bits (176), Expect = 8e-34
Identities = 178/237 (75%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| ||||| || | || | ||| |||| || | || || ||||||||||||||
Sbjct 40883 TATTTGCATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATT 40824
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|| ||||| | ||| | ||| ||||| | ||| |||||||||||||| || | |||||
Sbjct 40823 GTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTG 40764
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
|| || || || || || |||||||| || || ||||| ||||| || | || ||
Sbjct 40763 GTCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGA 40704
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || || ||||| ||||| ||||| | |||||| |||||||| |||||
Sbjct 40703 TGGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409
||||| || || || || |||||||||||||| |||||||| ||||| | || || ||
Sbjct 41312 TACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCCTC 41253
Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
|| || || ||||| ||||| || | |||||||| || || || || ||||| || ||
Sbjct 41252 CAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTG 41193
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||||| ||||| |||||||| | || || ||||| || |||| ||| ||||| ||
Sbjct 41192 GATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTT 41133
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| |||||||| ||||||||
Sbjct 41132 CCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
|||||||| ||| || ||||||||||| || || |||||||| || ||||| | || ||
Sbjct 41543 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATC 41484
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|||| ||||| |||||||| || || | |||||| || || || || || || |||||
Sbjct 41483 CTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATC 41424
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| || || |||||||| | || ||| || || ||||| | || || ||
Sbjct 41423 TTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGT 41364
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| |||||||| || || ||||| ||||||||
Sbjct 41363 CTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 41331
>seq1305
Length=286731
Score = 152 bits (168), Expect = 1e-31
Identities = 164/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| ||||| ||||| || ||||| || |||||||| | || | || ||
Sbjct 24772 AAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATC 24831
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|||||||||||| |||||||| || | | || || || || || || ||||| |||||
Sbjct 24832 TTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC 24891
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| || || |||||||||||||||| |||||| | || ||||| || ||||| ||
Sbjct 24892 TTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGT 24951
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||| ||||| || || || || || |||||| ||
Sbjct 24952 TTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 24988
>seq1351
Length=825266
Score = 107 bits (118), Expect = 4e-18
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 268851 ATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGT 268910
|| || | || || ||||| | | ||||||||| ||||| || || | || ||| |
Sbjct 602392 ATGTTTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTT 602333
Query 268911 TCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAG 268970
| | |||||||| || | |||||||||| || || || || || || || ||||| |
Sbjct 602332 TTTCACAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGG 602273
Query 268971 AAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATA 269017
||||| ||||||||||||||||| | ||||||| || || ||||||
Sbjct 602272 AAAATGTTCATTCAGAGATGTACTCTTTATTAATTGACACATATATA 602226
>seq4254
Length=614577
Score = 100 bits (110), Expect = 7e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 237987 CAAGTTGACGCTCACAATATTGTACCTTGTTGGGAAGCATCTCATAAACAAGAATACGGT 238046
|| || || ||||||||| | || || ||||||| || ||| ||||||| |||||
Sbjct 227669 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 227728
Query 238047 GCTAGAACATTACGTAAGAAAATAAATGGTATGTTAGATACATATCTTACAGAATTTCCT 238106
|| |||||| || | || ||||| ||| || |||||| |||||| ||||||||||||
Sbjct 227729 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 227788
Query 238107 GTAATAACTAAACATCCTTA 238126
| | | ||||||||||||
Sbjct 227789 CCAGTTATTAAACATCCTTA 227808
>seq3342
Length=114733
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413
||||||| || ||||| || ||||| ||||| |||||||||||||| || || | ||||
Sbjct 94463 AGATGTAGAGTCGATTCATTATGAATGTTATATTCAGATAGAGTTCTTCCATCATTTAGT 94522
Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473
|| || || |||| |||| || || | ||| ||| || ||||| | || | |||
Sbjct 94523 TGCTTGCCTTCAAATATTAATCTTTGATATTCATGAGAGATGCCTTCCCTTTCGTAAATT 94582
Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533
|| | || |||| ||||||||| | | ||||| || | || | | | ||
Sbjct 94583 TTAGACTTCACATGTTCTACGGTGTTAGTGGGTTCAACTGCGAG---GACAACGTGGCCC 94639
Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | |||||| || |||||||||||
Sbjct 94640 GTGAGGGATTTTACGAAAATCTGCATTTT 94668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151334832373772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |