Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3424 210 5e-49 seq2787 196 1e-44 seq1305 152 1e-31 seq1351 107 4e-18 seq4254 100 7e-16 seq3342 96.9 8e-15 >seq3424 Length=494560 Score = 210 bits (232), Expect = 5e-49 Identities = 190/238 (80%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||| |||| ||||| ||||| || |||||||| ||||||||||| Sbjct 289759 TATTTGCATTCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATT 289700 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||||||||||| || | || ||||| || || |||||||||||||| || || || || Sbjct 289699 GTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTG 289640 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| || || || || |||||||||||||| || || || |||||||| | ||||| Sbjct 289639 ATCTGGGGGAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGA 289580 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||| || || | ||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct 289579 AGCTTCCACTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522 Score = 205 bits (226), Expect = 2e-47 Identities = 184/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | |||||||| |||||| |||||||||||||||||||| ||||| Sbjct 289980 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCT 289921 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| || | || || || ||||| |||||||||||||| ||||| ||||| || ||| Sbjct 289920 GATAGTGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 289861 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| ||||| || || || |||||||| | || || || || Sbjct 289860 GGAATGCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 289801 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||| ||||| ||||| || |||||||| |||||| Sbjct 289800 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCACAAATATTTGCATT 289750 Score = 203 bits (224), Expect = 7e-47 Identities = 197/252 (78%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368 |||||| || | ||||| ||||| ||||| |||| |||||||| || || |||||| Sbjct 289086 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGAT 289030 Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||||||||| || || |||||||| || | || ||||| || || |||||||||||| Sbjct 289029 TCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 288970 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || || || ||||| || || ||||| |||||||||||||| || ||||| |||||| Sbjct 288969 ATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTT 288910 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| ||| || || || | || |||||||| ||||| ||||| ||||| Sbjct 288909 TCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACG 288850 Query 104549 AATATCTGCATT 104560 || || |||||| Sbjct 288849 AAAATTTGCATT 288838 Score = 194 bits (214), Expect = 4e-44 Identities = 195/252 (77%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368 |||||| || | ||||| ||||| ||||| |||| ||||| || || || || ||| Sbjct 289542 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGAT 289486 Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||||||||| ||||||||||| || | || ||||| || || |||||||||||| Sbjct 289485 TCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 289426 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || || || ||||| || || || || |||||||||||||| || || || |||||| Sbjct 289425 ATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTT 289366 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| || ||| || || | || |||||||| ||||| ||||| |||||| Sbjct 289365 TCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACA 289306 Query 104549 AATATCTGCATT 104560 || || |||||| Sbjct 289305 AAAATTTGCATT 289294 Score = 187 bits (206), Expect = 6e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || || | || || | || || |||||||| || ||||||||||| || Sbjct 289296 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCT 289237 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || |||||||| |||||||| ||||||||||| |||||| Sbjct 289236 GACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGA 289177 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| ||||| || |||||||||| ||||| || || Sbjct 289176 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCC 289117 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | ||| ||||| || ||||| ||||| ||||||||||| |||||| Sbjct 289116 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289066 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || || || || || | |||||||||||||| ||||||||||| ||| Sbjct 290661 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAT 290602 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | || | || ||||| ||||| ||||| || ||||| || || |||||||| ||||| Sbjct 290601 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290542 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| ||||| ||||||||||| || |||||||||| ||||| || ||| || Sbjct 290541 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 290482 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || ||||| || ||||| ||||| |||||||| || ||||| Sbjct 290481 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435 Score = 183 bits (202), Expect = 7e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| | | |||| ||| || ||||| || ||||| ||||||||||| Sbjct 290436 ATGCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC 290377 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||| ||||| ||||| || ||||| || || |||||||| ||| Sbjct 290376 GACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 290317 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| ||||||||||| || |||||||||| ||||| || ||| Sbjct 290316 GGAATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 290257 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| | || ||||| || ||||| ||||| |||||||| || |||||| Sbjct 290256 ACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 290206 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||||||| | | |||| ||| || ||||| || ||||| ||||||||||| Sbjct 290208 ATTCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC 290149 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||| ||||| ||||| || ||||| || || |||||||| ||| Sbjct 290148 GACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 290089 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||||||||| || |||||||||| || || || || Sbjct 290088 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCC 290029 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | |||||||| || ||||| | |||||| ||||| || ||||| Sbjct 290028 ACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || ||||| | | |||| || || |||||||| ||||| ||||||||||| Sbjct 288840 ATTCCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCT 288781 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| | ||| ||||| || |||||||| || |||||||| ||| Sbjct 288780 GAGAGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGA 288721 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||||||||| ||||| ||||| | ||||| || ||| Sbjct 288720 GGGATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCC 288661 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| || || || ||||| | |||||||| || || ||||| Sbjct 288660 ACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611 >seq2787 Length=76071 Score = 196 bits (216), Expect = 1e-44 Identities = 164/201 (82%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||||||||||||||| ||||| | |||||||| | ||| |||||| Sbjct 39703 GTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCA 39644 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | |||||||| ||||| || ||||| || || ||||| || |||||| Sbjct 39643 GCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTT 39584 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | |||||| |||||| || || | ||||| || ||||| ||||||||| Sbjct 39583 ACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGTAAGTGTT 39524 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| |||||||||||| Sbjct 39523 TTCACAAAGATCTGCATTTTG 39503 Score = 192 bits (212), Expect = 1e-43 Identities = 174/219 (79%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| | ||||| ||||| |||||||| || ||||||||||| ||||||| || | Sbjct 39952 AGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGG 39893 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || |||||||||||||||||||||||||| |||||||||||||| || || || || ||| Sbjct 39892 CCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCT 39833 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || |||||||| || |||||||| | || ||| || |||||||||| || Sbjct 39832 TTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTG 39773 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || ||||| || || ||||| ||||||||| Sbjct 39772 ATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | |||||||| || || ||||||||||| || || || |||||| Sbjct 40192 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 40133 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||||| ||| || || |||||||| || | |||||||| ||| Sbjct 40132 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 40073 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || || || || ||||| |||||||| | || || || ||| Sbjct 40072 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 40013 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||||| || || ||||| |||||||| ||||| || ||||| Sbjct 40012 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963 Score = 168 bits (186), Expect = 2e-36 Identities = 180/237 (76%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| || || |||| || | ||||||||||| | ||||| || ||||| || || Sbjct 40427 TATTTGCATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTT 40368 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 |||||||| || || | ||| ||||| | ||| || |||||||| || || | ||| || Sbjct 40367 GTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTG 40308 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 |||||| || || || ||||| || || || || |||||||||||||| | ||||| Sbjct 40307 ATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGA 40248 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 40247 GGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191 Score = 168 bits (186), Expect = 2e-36 Identities = 180/237 (76%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| || || |||| || | ||||||| ||| | ||||| ||||| || || || Sbjct 40655 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTT 40596 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 |||||||| || || | ||| |||||||| || || |||||||| || || | ||||| Sbjct 40595 GTAGTCAGACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTG 40536 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| || || || || |||||||| |||||||| || ||||||||||| | ||| || Sbjct 40535 ATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 40476 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || |||||||| || || ||||| || |||||||| ||||| Sbjct 40475 TGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||||| | || | || || |||||||| ||||| |||||| Sbjct 41104 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 41045 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| |||||||| ||||| || || || | |||||||| ||| Sbjct 41044 GACAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 40985 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| ||||| |||||||| ||||| |||||||| | ||| || || || Sbjct 40984 GGAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 40925 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || || || || |||||||||||||| |||||||| |||||| Sbjct 40924 ACTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874 Score = 159 bits (176), Expect = 8e-34 Identities = 178/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| || | || | ||| |||| || | || || |||||||||||||| Sbjct 40883 TATTTGCATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATT 40824 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 || ||||| | ||| | ||| ||||| | ||| |||||||||||||| || | ||||| Sbjct 40823 GTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTG 40764 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 || || || || || || |||||||| || || ||||| ||||| || | || || Sbjct 40763 GTCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGA 40704 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || ||||| ||||| ||||| | |||||| |||||||| ||||| Sbjct 40703 TGGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| || || || || |||||||||||||| |||||||| ||||| | || || || Sbjct 41312 TACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCCTC 41253 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || || || ||||| ||||| || | |||||||| || || || || ||||| || || Sbjct 41252 CAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTG 41193 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||| ||||| |||||||| | || || ||||| || |||| ||| ||||| || Sbjct 41192 GATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTT 41133 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| |||||||| |||||||| Sbjct 41132 CCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||||| ||| || ||||||||||| || || |||||||| || ||||| | || || Sbjct 41543 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATC 41484 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 |||| ||||| |||||||| || || | |||||| || || || || || || ||||| Sbjct 41483 CTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATC 41424 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| || || |||||||| | || ||| || || ||||| | || || || Sbjct 41423 TTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGT 41364 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| |||||||| || || ||||| |||||||| Sbjct 41363 CTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 41331 >seq1305 Length=286731 Score = 152 bits (168), Expect = 1e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| ||||| ||||| || ||||| || |||||||| | || | || || Sbjct 24772 AAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATC 24831 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 |||||||||||| |||||||| || | | || || || || || || ||||| ||||| Sbjct 24832 TTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC 24891 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || || || |||||||||||||||| |||||| | || ||||| || ||||| || Sbjct 24892 TTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGT 24951 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| ||||| || || || || || |||||| || Sbjct 24952 TTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 24988 >seq1351 Length=825266 Score = 107 bits (118), Expect = 4e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 268851 ATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGT 268910 || || | || || ||||| | | ||||||||| ||||| || || | || ||| | Sbjct 602392 ATGTTTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTT 602333 Query 268911 TCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAG 268970 | | |||||||| || | |||||||||| || || || || || || || ||||| | Sbjct 602332 TTTCACAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGG 602273 Query 268971 AAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATA 269017 ||||| ||||||||||||||||| | ||||||| || || |||||| Sbjct 602272 AAAATGTTCATTCAGAGATGTACTCTTTATTAATTGACACATATATA 602226 >seq4254 Length=614577 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 237987 CAAGTTGACGCTCACAATATTGTACCTTGTTGGGAAGCATCTCATAAACAAGAATACGGT 238046 || || || ||||||||| | || || ||||||| || ||| ||||||| ||||| Sbjct 227669 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 227728 Query 238047 GCTAGAACATTACGTAAGAAAATAAATGGTATGTTAGATACATATCTTACAGAATTTCCT 238106 || |||||| || | || ||||| ||| || |||||| |||||| |||||||||||| Sbjct 227729 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 227788 Query 238107 GTAATAACTAAACATCCTTA 238126 | | | |||||||||||| Sbjct 227789 CCAGTTATTAAACATCCTTA 227808 >seq3342 Length=114733 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||||| || ||||| || ||||| ||||| |||||||||||||| || || | |||| Sbjct 94463 AGATGTAGAGTCGATTCATTATGAATGTTATATTCAGATAGAGTTCTTCCATCATTTAGT 94522 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || || |||| |||| || || | ||| ||| || ||||| | || | ||| Sbjct 94523 TGCTTGCCTTCAAATATTAATCTTTGATATTCATGAGAGATGCCTTCCCTTTCGTAAATT 94582 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || | || |||| ||||||||| | | ||||| || | || | | | || Sbjct 94583 TTAGACTTCACATGTTCTACGGTGTTAGTGGGTTCAACTGCGAG---GACAACGTGGCCC 94639 Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || | |||||| || ||||||||||| Sbjct 94640 GTGAGGGATTTTACGAAAATCTGCATTTT 94668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151334832373772