Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 196 4e-45
seq1305 95.1 1e-14
>seq3463
Length=282612
Score = 196 bits (216), Expect = 4e-45
Identities = 782/1209 (65%), Gaps = 53/1209 (4%)
Strand=Plus/Minus
Query 30232 TACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGA-CTTAGTTCCCGTCCC 30290
||||| ||||| |||||||| || || ||| || | || | || | || | ||
Sbjct 183006 TACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTA-TACCTATACC 182948
Query 30291 CAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGA 30350
|| ||||| ||| | | || |||||| | || | ||||| || || || || || ||
Sbjct 182947 TAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGTGACGGCATCAATGA 182888
Query 30351 TAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAGA 30410
||| ||||| | | || || | || |||| || || || || ||
Sbjct 182887 TAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGA 182828
Query 30411 GGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAGT 30470
||| || ||||| | || |||||| |||| || | |||||||||||||||||| |
Sbjct 182827 GGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATT 182768
Query 30471 GGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGACA 30530
| | ||| |||| || || ||||| || ||||||||| | ||| | | |||| |
Sbjct 182767 GTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAATGTC-ACTAAA----A 182713
Query 30531 CAATCCCGACC-----TTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCCT 30585
||| |||| || | | |||| | || |||||||| |||||||| ||| ||| |||
Sbjct 182712 CAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCT 182653
Query 30586 TTCTTTAAATTGAGTTCTGCCGAA---AATCGCGC-CGTTTTCGTTGAGTCCGCACGAGA 30641
||| || || ||| || | || || | | || ||| || |||| | | ||
Sbjct 182652 TTC-TTCTTTTTAGT--TGACAAATCTAAGAGAACACGATTT-GTGCAGTCAGTAAAGGA 182597
Query 30642 GTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGG 30701
|| | | | ||||||||||| || || || | || ||||| |||||||| || || ||
Sbjct 182596 GTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 182537
Query 30702 TAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTT 30761
||||||||||| || || | || |||||| ||||| | ||||| ||
Sbjct 182536 CAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTT 182480
Query 30762 ATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTC--TAAAGAAACAGGGAAAAAATAC 30819
||||||| | | || ||||| |||| || || ||||| || || ||||||
Sbjct 182479 GATGAAAGAATTACGTGAGATGCTCGACGAGCTCTCAGCTAAGAA--TGGTAAGAAATAC 182422
Query 30820 CAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTTAATTATGAAAAT 30879
| | || || || |||||||| || | ||||||||| | || | |||| ||
Sbjct 182421 GAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTAGACTATGGCAAG 182362
Query 30880 GCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCT 30939
|| ||| | ||| | ||||| ||||| | |||| ||||| || || || || |||||
Sbjct 182361 GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCA 182302
Query 30940 AA-CACGGACTTGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAGAAAA 30998
|| || ||| ||| |||| || || | || | || | ||||| | | ||||
Sbjct 182301 AATGACACTCTT-GGACATCAAACGCCATTGTACGCGCCAGCGTGGAATCCCAAGGAAAC 182243
Query 30999 ATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGAAAAT 31058
|| || | || | || ||| | ||| | || || ||| |||||| ||
Sbjct 182242 TTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGAT 182183
Query 31059 AGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAAACAA 31118
|| ||| |||||| ||||| || | || ||||| || || ||||| ||| ||||
Sbjct 182182 TGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGACAA 182123
Query 31119 CAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAGTTGT 31178
|| |||||| || || ||| || || | |||||||||||| || ||||| ||
Sbjct 182122 CATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGT 182063
Query 31179 AGATTACA--AAGATT-----TGATA----CAAAGGTACACCGACACTT--ATTATGACT 31225
|| || | ||||| ||| | |||| | | | | || |||| |||
Sbjct 182062 TGACTATAGGGAGATTGCGAATGAAATCGCTCAAGGCA-AGTGGGAGTTCCATTACGACA 182004
Query 31226 CTGTAGCGCAAGCGGCATATGCGTTCGCAGAGAAT--GTTGGTGATCTACTTACTTACGA 31283
||| || ||||| | || ||| |||| || ||| ||||| | || || ||
Sbjct 182003 ATGTCGCCCAAGCCCCTTA--CGTCTTCAGACCATCAACTGGAGATCTTGTAACCTATGA 181946
Query 31284 TAACCC---AACGAGTGTGCAAGCTAAGGGAAAGTTTGTAATAGACAACAATTTGGGTGG 31340
||| | | || | | || ||||| || | ||||| | | ||||| | |||||
Sbjct 181945 TAATGCTAGATCGGTTATTGAA---AAGGGTAAATATGTAAGAAATAACAAGCTAGGTGG 181889
Query 31341 TTTGTTTGCGTGGGAACTGGACGCCGACAATGGCGACATTCTTAACAGCATGAACGAGGG 31400
| | ||||| |||||| ||||||| || || || ||| | || || ||||||| |||
Sbjct 181888 TCTCTTTGCTTGGGAAGTGGACGCTGATAACGGTGACCTACTGAATGCCATGAACATGGG 181829
Query 31401 TTTAGGTAA 31409
| | |||||
Sbjct 181828 TCTCGGTAA 181820
>seq1305
Length=286731
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||||||||| | | | ||| | ||| | |||| ||||||||||||||||| ||||
Sbjct 24757 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 24816
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|||| || | || || || || ||||| | | || ||||| ||||| || ||
Sbjct 24817 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 24876
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||| || ||||| || | | |||| ||||||| | ||||
Sbjct 24877 AATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCAC 24936
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || ||||||||||| || || || || || ||||| ||||| |||
Sbjct 24937 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 24988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421229077598309
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |