Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq2653 113 2e-20 >seq2653 Length=533146 Score = 113 bits (124), Expect = 2e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || ||||||||||| || || ||||| ||||| ||| || | |||||| Sbjct 111260 GGCTTCTCTGTGGAGGGTCAAGAGTTGATTCAGGAAATATTATCCAAACAGTTATATTTG 111201 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 |||||||| || ||| |||||| | | |||| ||| || |||| |||| | || | Sbjct 111200 TGTCAATGCCTAGCTGCCTTGATGTTGGTGCGAACTGGAGGCCATTTTGTTGTGAAGCTA 111141 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTT 4078 || ||||| ||||| | ||| |||| | || | || || | |||||||||| |||| Sbjct 111140 TTTGATATTTTTACCCATTTCAGTGTTAGTCTTGTTTACATTATGTATAGATGTTTT 111084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276539076528427