Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq1778 129 3e-25
seq1463 129 3e-25
seq579 127 1e-24
seq3453 125 4e-24
seq1336 123 1e-23
seq869 122 5e-23
seq2197 120 2e-22
seq2286 116 2e-21
seq1763 116 2e-21
seq1345 114 7e-21
seq3489 93.3 2e-14
>seq1778
Length=102347
Score = 129 bits (142), Expect = 3e-25
Identities = 87/97 (90%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494
|||||||| |||| ||| ||||||||||| |||||||||| |||||||||||||||
Sbjct 41379 AATTAATATAAAAGAAAAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 41320
Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
|||||||||||||| ||||||||||||||||||||||
Sbjct 41319 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 41283
Score = 127 bits (140), Expect = 1e-24
Identities = 91/103 (88%), Gaps = 3/103 (3%)
Strand=Plus/Plus
Query 11429 AAATATAGAATTAATAAAAAA--TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486
|||| || ||||||| ||||| | | |||||||||||| |||||||||| |||||||
Sbjct 37297 AAAT-TACAATTAATTAAAAAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTT 37355
Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct 37356 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 37398
Score = 122 bits (134), Expect = 5e-23
Identities = 89/102 (87%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 11429 AAATATAGAATTAATA-AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487
|||| ||||| || | |||||| | ||||||||||| |||||||||| ||||||||
Sbjct 27782 AAATTTAGAAAAAAAATAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTC 27725
Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||||| ||||||||||||||||||||
Sbjct 27724 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 27683
Score = 122 bits (134), Expect = 5e-23
Identities = 85/97 (88%), Gaps = 4/97 (4%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAA----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTT 11492
|||| | ||||||| ||| ||||||||||| |||||||||| |||||||||||||
Sbjct 29432 AATTTAAAAAAAATAAAAATATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTT 29373
Query 11493 ATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||||| ||||||||||||||||||||
Sbjct 29372 ATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 29336
Score = 122 bits (134), Expect = 5e-23
Identities = 84/94 (89%), Gaps = 4/94 (4%)
Strand=Plus/Plus
Query 11441 AATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
|||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 38769 AATAAAAAGATC---TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 38825
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533
||||||||| ||||||||||||||||||||| ||
Sbjct 38826 CGACGCTCTAACCAACTGAGCTAATGGGCCGACG 38859
Score = 116 bits (128), Expect = 2e-21
Identities = 80/91 (88%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||| |||||| | ||||||||||| |||||||||| |||||||||||||||||||
Sbjct 27012 TTATTAAAAATT----TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 26957
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||| ||||||||||||||||||||
Sbjct 26956 ACGACGCTCTAACCAACTGAGCTAATGGGCC 26926
Score = 98.7 bits (108), Expect = 5e-16
Identities = 59/63 (94%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 11467 AGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGG 11526
|| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 44768 AGAATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGG 44709
Query 11527 GCC 11529
|||
Sbjct 44708 GCC 44706
>seq1463
Length=61254
Score = 129 bits (142), Expect = 3e-25
Identities = 87/97 (90%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493
||||| |||||||||| | ||||||||||| |||||||||| ||||||||||||||
Sbjct 49248 AGAATAAATAAAAAATATTACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 49189
Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||||||||||||| |||||||||||||||||||||
Sbjct 49188 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 49152
>seq579
Length=29693
Score = 127 bits (140), Expect = 1e-24
Identities = 82/89 (92%), Gaps = 1/89 (1%)
Strand=Plus/Minus
Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
|||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 16808 TAAAAAATTAA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 16750
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGT 11531
|||||| ||||||||||||||||||||||
Sbjct 16749 CGCTCTAACCAACTGAGCTAATGGGCCGT 16721
>seq3453
Length=538689
Score = 125 bits (138), Expect = 4e-24
Identities = 79/86 (92%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 528331 AAAAAGGAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 528272
Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530
|||| |||||||||||||||||||||
Sbjct 528271 CTCTAACCAACTGAGCTAATGGGCCG 528246
>seq1336
Length=24493
Score = 123 bits (136), Expect = 1e-23
Identities = 79/87 (91%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
|||||||| |||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 23397 TAAAAAATTTGATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 23338
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||| ||||||||||||||||||||
Sbjct 23337 CGCTCTAACCAACTGAGCTAATGGGCC 23311
>seq869
Length=61017
Score = 122 bits (134), Expect = 5e-23
Identities = 78/86 (91%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 49611 AAAAAAGAAGATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 49670
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 49671 GCTCTAACCAACTGAGCTAATGGGCC 49696
>seq2197
Length=48374
Score = 120 bits (132), Expect = 2e-22
Identities = 80/90 (89%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
||||||||| ||||||||||| |||||||||| |||||||||||||||||||| |
Sbjct 23510 ATAAAAAATAGTCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCATG 23569
Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
||||||| ||||||||||||||||||||||
Sbjct 23570 ACGCTCTAACCAACTGAGCTAATGGGCCGT 23599
>seq2286
Length=98244
Score = 116 bits (128), Expect = 2e-21
Identities = 76/83 (92%), Gaps = 1/83 (1%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 37488 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 37547
Query 11516 TGAGCTAATGGGCC-GTCGACGA 11537
|||||||||||||| || |||||
Sbjct 37548 TGAGCTAATGGGCCAGTGGACGA 37570
Score = 102 bits (112), Expect = 4e-17
Identities = 77/89 (87%), Gaps = 2/89 (2%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
||||| |||| || |||||| |||| || |||||| |||||||||||||||||||||
Sbjct 31180 AATAACAAAT-AACTTGGCCTATGAGGGG-TCGAACTCGCGACCTTCGCGTTATTAGCAC 31123
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||| ||||||
Sbjct 31122 GACGCTCTAACCAACTGAGCTAGTGGGCC 31094
>seq1763
Length=512502
Score = 116 bits (128), Expect = 2e-21
Identities = 79/88 (90%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
||||||| | | |||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 398677 AAAAAATGTATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 398618
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||| |||||||||||||||||||||
Sbjct 398617 CGCTCTAACCAACTGAGCTAATGGGCCG 398590
>seq1345
Length=52608
Score = 114 bits (126), Expect = 7e-21
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 9682 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 9741
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 9742 TGAGCTAATGGGCCG 9756
>seq3489
Length=1325285
Score = 93.3 bits (102), Expect = 2e-14
Identities = 64/74 (86%), Gaps = 7/74 (9%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 802954 TGGCCCATGAGGGGATCGAACCT-------TCGCGTTATTAGCACGACGCTCTAACCAAC 803006
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 803007 TGAGCTAATGGGCC 803020
Lambda K H
0.638 0.409 0.919
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261477467544484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |