Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq3484 100 3e-17 >seq3484 Length=929575 Score = 100 bits (110), Expect = 3e-17 Identities = 175/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCAT--TGACTCCTGGGCAGGATGGGCACTCTG 742 || ||||| || || ||||| || | |||| | || ||| ||| ||||| |||| Sbjct 498477 CATTCAAAAAATACATGCTCAGCGTTTTCACGCTTACCACTG--CAGCTGGGGCATTCTG 498420 Query 743 GGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACA 802 |||||| || || || ||||||| | || | ||| | || || || || || | || Sbjct 498419 GGGAATCCTCGTGTTTCAAGCGGTGTAAGTAATCTCGGGAGCAACCATGACCAGAAAGCA 498360 Query 803 TCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTG 862 |||| ||||||||||| || |||| | || | |||| |||| | |||| | | Sbjct 498359 TCTGGGTAAGATAATAATTTGTCTCAGCTTGCTTACGGTAGTGCCATGGTTCGATCTTCG 498300 Query 863 GTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGAC 922 |||||||||||| |||||||| || || || || |||||| |||||||||| Sbjct 498299 GTATGAGACGATAGGTCCATCTTCCTTTGTTTGAGGTGTCCCACATCAGTTGCCATCTCT 498240 Query 923 TTATGCTCCTCCG 935 |||||| |||| Sbjct 498239 CAATGCTCTTCCG 498227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50947861507774